RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 KDM3BQ7LBC6 1761 aa7.66□□□□□ -1.18
ZEB1-219ENST00000560721 TRIM52Q96A61 297 aa7.65□□□□□ -1.18
ZEB1-219ENST00000560721 MAP2P11137 1827 aaKnown RBP7.65□□□□□ -1.19
ZEB1-219ENST00000560721 SCN11AQ9UI33 1791 aa7.65□□□□□ -1.19
ZEB1-219ENST00000560721 SOS2Q07890 1332 aaPredicted RBP7.64□□□□□ -1.19
ZEB1-219ENST00000560721 CACNA1FO60840 1977 aa7.64□□□□□ -1.19
ZEB1-219ENST00000560721 NHSQ6T4R5 1651 aa7.64□□□□□ -1.19
ZEB1-219ENST00000560721 EIF4G2P78344 907 aaKnown RBP eCLIP7.63□□□□□ -1.19
ZEB1-219ENST00000560721 MYT1Q01538 1121 aa7.62□□□□□ -1.19
ZEB1-219ENST00000560721 TXNDC2Q86VQ3 553 aa7.62□□□□□ -1.19
ZEB1-219ENST00000560721 MIER1Q8N108 512 aa7.62□□□□□ -1.19
ZEB1-219ENST00000560721 C5P01031 1676 aa7.62□□□□□ -1.19
ZEB1-219ENST00000560721 WASLO00401 505 aaPredicted RBP7.62□□□□□ -1.19
ZEB1-219ENST00000560721 MSH6P52701 1360 aa7.62□□□□□ -1.19
ZEB1-219ENST00000560721 LY75O60449 1722 aa7.61□□□□□ -1.19
ZEB1-219ENST00000560721 C19orf44Q9H6X5 657 aa7.61□□□□□ -1.19
ZEB1-219ENST00000560721 CGNL1Q0VF96 1302 aa7.61□□□□□ -1.19
ZEB1-219ENST00000560721 RGS12O14924 1447 aa7.61□□□□□ -1.19
ZEB1-219ENST00000560721 SLIT2O94813 1529 aa7.61□□□□□ -1.19
ZEB1-219ENST00000560721 TMF1P82094 1093 aa7.61□□□□□ -1.19
ZEB1-219ENST00000560721 DISP3Q9P2K9 1392 aa7.61□□□□□ -1.19
ZEB1-219ENST00000560721 PER1O15534 1290 aaPredicted RBP7.6□□□□□ -1.19
ZEB1-219ENST00000560721 CCER2I3L3R5 266 aa7.6□□□□□ -1.19
ZEB1-219ENST00000560721 SBF2Q86WG5 1849 aa7.59□□□□□ -1.19
ZEB1-219ENST00000560721 KDRP35968 1356 aa7.59□□□□□ -1.19
ZEB1-219ENST00000560721 CADPS2Q86UW7 1296 aa7.59□□□□□ -1.19
ZEB1-219ENST00000560721 DISP2A7MBM2 1401 aa7.58□□□□□ -1.2
ZEB1-219ENST00000560721 COL5A3P25940 1745 aaPredicted RBP7.58□□□□□ -1.2
ZEB1-219ENST00000560721 DCAF11Q8TEB1 546 aa7.58□□□□□ -1.2
ZEB1-219ENST00000560721 C11orf95C9JLR9 678 aaPredicted RBP7.57□□□□□ -1.2
ZEB1-219ENST00000560721 SPATA31A6Q5VVP1 1343 aa7.57□□□□□ -1.2
ZEB1-219ENST00000560721 RALBP1Q15311 655 aa7.57□□□□□ -1.2
ZEB1-219ENST00000560721 TNS1Q9HBL0 1735 aaKnown RBP7.56□□□□□ -1.2
ZEB1-219ENST00000560721 KCNA4P22459 653 aa7.56□□□□□ -1.2
ZEB1-219ENST00000560721 RGPD5Q99666 1765 aa7.56□□□□□ -1.2
ZEB1-219ENST00000560721 AMOTL2Q9Y2J4 779 aa7.56□□□□□ -1.2
ZEB1-219ENST00000560721 DLG5Q8TDM6 1919 aa7.56□□□□□ -1.2
ZEB1-219ENST00000560721 SOS1Q07889 1333 aaPredicted RBP7.55□□□□□ -1.2
ZEB1-219ENST00000560721 KIF7Q2M1P5 1343 aa7.55□□□□□ -1.2
ZEB1-219ENST00000560721 LAMB2P55268 1798 aa7.55□□□□□ -1.2
ZEB1-219ENST00000560721 PLEKHH1Q9ULM0 1364 aa7.55□□□□□ -1.2
ZEB1-219ENST00000560721 A0A1W2PP64 1363 aa7.55□□□□□ -1.2
ZEB1-219ENST00000560721 RGL2O15211 777 aa7.54□□□□□ -1.2
ZEB1-219ENST00000560721 CFAP70Q5T0N1 1121 aa7.54□□□□□ -1.2
ZEB1-219ENST00000560721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.54□□□□□ -1.2
ZEB1-219ENST00000560721 SIN3AQ96ST3 1273 aa7.54□□□□□ -1.2
ZEB1-219ENST00000560721 CCDC61Q9Y6R9 512 aa7.54□□□□□ -1.2
ZEB1-219ENST00000560721 ATRNO75882 1429 aa7.53□□□□□ -1.2
ZEB1-219ENST00000560721 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
ZEB1-219ENST00000560721 CARD11Q9BXL7 1154 aa7.53□□□□□ -1.2
ZEB1-219ENST00000560721 TTC21BQ7Z4L5 1316 aa7.53□□□□□ -1.2
ZEB1-219ENST00000560721 DUOX1Q9NRD9 1551 aa7.53□□□□□ -1.2
ZEB1-219ENST00000560721 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
ZEB1-219ENST00000560721 AMER1Q5JTC6 1135 aaPredicted RBP7.53□□□□□ -1.2
ZEB1-219ENST00000560721 BABAM1Q9NWV8 329 aa7.53□□□□□ -1.2
ZEB1-219ENST00000560721 PRR36Q9H6K5 1346 aa7.52□□□□□ -1.2
ZEB1-219ENST00000560721 HMGB2P26583 209 aaKnown RBP7.52□□□□□ -1.21
ZEB1-219ENST00000560721 NPHP3Q7Z494 1330 aa7.52□□□□□ -1.21
ZEB1-219ENST00000560721 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.21
ZEB1-219ENST00000560721 TOGARAM1Q9Y4F4 1720 aa7.52□□□□□ -1.21
ZEB1-219ENST00000560721 NCKAP5LQ9HCH0 1330 aa7.51□□□□□ -1.21
ZEB1-219ENST00000560721 ARFGEF2Q9Y6D5 1785 aa7.51□□□□□ -1.21
ZEB1-219ENST00000560721 TULP1O00294 542 aaPredicted RBP7.51□□□□□ -1.21
ZEB1-219ENST00000560721 TERF2IPQ9NYB0 399 aa7.51□□□□□ -1.21
ZEB1-219ENST00000560721 JCADQ9P266 1359 aa7.51□□□□□ -1.21
ZEB1-219ENST00000560721 CEBPAP49715 358 aaPredicted RBP7.5□□□□□ -1.21
ZEB1-219ENST00000560721 PSME1Q06323 249 aa7.5□□□□□ -1.21
ZEB1-219ENST00000560721 KDM2AQ9Y2K7 1162 aa7.5□□□□□ -1.21
ZEB1-219ENST00000560721 NBPF1Q3BBV0 1214 aa7.5□□□□□ -1.21
ZEB1-219ENST00000560721 RGPD2P0DJD1 1756 aa7.5□□□□□ -1.21
ZEB1-219ENST00000560721 ITGB4P16144 1822 aa7.5□□□□□ -1.21
ZEB1-219ENST00000560721 TAF1LQ8IZX4 1826 aa7.49□□□□□ -1.21
ZEB1-219ENST00000560721 NUP188Q5SRE5 1749 aa7.49□□□□□ -1.21
ZEB1-219ENST00000560721 CCDC27Q2M243 656 aa7.49□□□□□ -1.21
ZEB1-219ENST00000560721 PHF23Q9BUL5 403 aaPredicted RBP7.49□□□□□ -1.21
ZEB1-219ENST00000560721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.49□□□□□ -1.211e-7■■■■■ 28.4
ZEB1-219ENST00000560721 COL5A2P05997 1499 aaPredicted RBP7.49□□□□□ -1.21
ZEB1-219ENST00000560721 KCNH5Q8NCM2 988 aa7.49□□□□□ -1.21
ZEB1-219ENST00000560721 YTHDC1Q96MU7 727 aaKnown RBP7.48□□□□□ -1.21
ZEB1-219ENST00000560721 MYT1LQ9UL68 1186 aa7.48□□□□□ -1.21
ZEB1-219ENST00000560721 TJP1Q07157 1748 aa7.48□□□□□ -1.21
ZEB1-219ENST00000560721 NRXN2Q9P2S2 1712 aa7.48□□□□□ -1.21
ZEB1-219ENST00000560721 FOXD1Q16676 465 aa7.48□□□□□ -1.21
ZEB1-219ENST00000560721 THRAP3Q9Y2W1 955 aaKnown RBP7.48□□□□□ -1.21
ZEB1-219ENST00000560721 ANKRD36CQ5JPF3 1778 aa7.48□□□□□ -1.21
ZEB1-219ENST00000560721 ERICH6Q7L0X2 663 aa7.48□□□□□ -1.21
ZEB1-219ENST00000560721 NSD3Q9BZ95 1437 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 HTATSF1O43719 755 aaKnown RBP7.47□□□□□ -1.21
ZEB1-219ENST00000560721 CERKQ8TCT0 537 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 PRAM1Q96QH2 718 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 C4AP0C0L4 1744 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 C4BP0C0L5 1744 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 KIF13BQ9NQT8 1826 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 ITGAEP38570 1179 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 ZNF326Q5BKZ1 582 aaKnown RBP7.47□□□□□ -1.21
ZEB1-219ENST00000560721 NUDT16Q96DE0 195 aaKnown RBP7.47□□□□□ -1.21
ZEB1-219ENST00000560721 CDK19Q9BWU1 502 aa7.47□□□□□ -1.21
ZEB1-219ENST00000560721 FLT4P35916 1363 aa7.46□□□□□ -1.21
ZEB1-219ENST00000560721 ZBTB22O15209 634 aa7.46□□□□□ -1.21
ZEB1-219ENST00000560721 ONECUT3O60422 494 aaPredicted RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms