RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
TNFAIP2-207ENST00000560562 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.82
TNFAIP2-207ENST00000560562 ROCK2O75116 1388 aaKnown RBP20.14■□□□□ 0.82
TNFAIP2-207ENST00000560562 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
TNFAIP2-207ENST00000560562 ACEP12821 1306 aa20.13■□□□□ 0.81
TNFAIP2-207ENST00000560562 COL14A1Q05707 1796 aaKnown RBP20.13■□□□□ 0.81
TNFAIP2-207ENST00000560562 UNC5CLQ8IV45 518 aa20.12■□□□□ 0.81
TNFAIP2-207ENST00000560562 CABP2Q9NPB3 220 aa20.12■□□□□ 0.81
TNFAIP2-207ENST00000560562 CCDC61Q9Y6R9 512 aa20.12■□□□□ 0.81
TNFAIP2-207ENST00000560562 PPIP5K1Q6PFW1 1433 aa20.12■□□□□ 0.81
TNFAIP2-207ENST00000560562 PLEKHG3A1L390 1219 aa20.11■□□□□ 0.81
TNFAIP2-207ENST00000560562 HAP1P54257 671 aaPredicted RBP20.11■□□□□ 0.81
TNFAIP2-207ENST00000560562 FAM83GA6ND36 823 aa20.1■□□□□ 0.81
TNFAIP2-207ENST00000560562 PAK3O75914 559 aaPredicted RBP20.1■□□□□ 0.81
TNFAIP2-207ENST00000560562 SRPK2P78362 688 aaKnown RBP20.1■□□□□ 0.81
TNFAIP2-207ENST00000560562 GJD4Q96KN9 370 aaPredicted RBP20.1■□□□□ 0.81
TNFAIP2-207ENST00000560562 NRKQ7Z2Y5 1582 aa20.09■□□□□ 0.81
TNFAIP2-207ENST00000560562 AKAP12Q02952 1782 aa20.08■□□□□ 0.81
TNFAIP2-207ENST00000560562 TONSLQ96HA7 1378 aa20.07■□□□□ 0.8
TNFAIP2-207ENST00000560562 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
TNFAIP2-207ENST00000560562 PIK3C2AO00443 1686 aa20.04■□□□□ 0.8
TNFAIP2-207ENST00000560562 VPS72Q15906 364 aa20.04■□□□□ 0.8
TNFAIP2-207ENST00000560562 BTG4Q9NY30 223 aa20.02■□□□□ 0.8
TNFAIP2-207ENST00000560562 CABP1Q9NZU7 370 aa20.02■□□□□ 0.8
TNFAIP2-207ENST00000560562 USP6P35125 1406 aa20.02■□□□□ 0.8
TNFAIP2-207ENST00000560562 ATAD2Q6PL18 1390 aa20.02■□□□□ 0.8
TNFAIP2-207ENST00000560562 KIAA0232Q92628 1395 aa20.02■□□□□ 0.8
TNFAIP2-207ENST00000560562 EVC2Q86UK5 1308 aa20.02■□□□□ 0.8
TNFAIP2-207ENST00000560562 LMO7Q8WWI1 1683 aa20.01■□□□□ 0.79
TNFAIP2-207ENST00000560562 SSH2Q76I76 1423 aa20.01■□□□□ 0.79
TNFAIP2-207ENST00000560562 MON2Q7Z3U7 1717 aa20.01■□□□□ 0.79
TNFAIP2-207ENST00000560562 USP19O94966 1318 aa20■□□□□ 0.79
TNFAIP2-207ENST00000560562 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
TNFAIP2-207ENST00000560562 SBNO2Q9Y2G9 1366 aa19.99■□□□□ 0.79
TNFAIP2-207ENST00000560562 CHRNA2Q15822 529 aa19.98■□□□□ 0.79
TNFAIP2-207ENST00000560562 ABTB2Q8N961 1025 aa19.98■□□□□ 0.79
TNFAIP2-207ENST00000560562 PRDM11Q9NQV5 511 aa19.98■□□□□ 0.79
TNFAIP2-207ENST00000560562 THSD7AQ9UPZ6 1657 aa19.98■□□□□ 0.79
TNFAIP2-207ENST00000560562 ZC3H6P61129 1189 aaKnown RBP19.97■□□□□ 0.79
TNFAIP2-207ENST00000560562 SLIT3O75094 1523 aa19.97■□□□□ 0.79
TNFAIP2-207ENST00000560562 CAMTA1Q9Y6Y1 1673 aa19.96■□□□□ 0.79
TNFAIP2-207ENST00000560562 ONECUT3O60422 494 aaPredicted RBP19.96■□□□□ 0.79
TNFAIP2-207ENST00000560562 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
TNFAIP2-207ENST00000560562 CCDC9Q9Y3X0 531 aaKnown RBP19.96■□□□□ 0.79
TNFAIP2-207ENST00000560562 CPSF1Q10570 1443 aaKnown RBP19.95■□□□□ 0.78
TNFAIP2-207ENST00000560562 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.78
TNFAIP2-207ENST00000560562 COL18A1P39060 1754 aa19.94■□□□□ 0.78
TNFAIP2-207ENST00000560562 CD163L1Q9NR16 1453 aa19.94■□□□□ 0.78
TNFAIP2-207ENST00000560562 SPATA31A5Q5VU36 1347 aa19.93■□□□□ 0.78
TNFAIP2-207ENST00000560562 SPATA31A7Q8IWB4 1347 aa19.93■□□□□ 0.78
TNFAIP2-207ENST00000560562 RGPD5Q99666 1765 aa19.93■□□□□ 0.78
TNFAIP2-207ENST00000560562 CPDO75976 1380 aa19.93■□□□□ 0.78
TNFAIP2-207ENST00000560562 FAM98CQ17RN3 349 aaKnown RBP19.93■□□□□ 0.78
TNFAIP2-207ENST00000560562 SRCAPQ6ZRS2 3230 aa19.92■□□□□ 0.78
TNFAIP2-207ENST00000560562 NLRP13Q86W25 1043 aa19.91■□□□□ 0.78
TNFAIP2-207ENST00000560562 USP54Q70EL1 1684 aa19.9■□□□□ 0.78
TNFAIP2-207ENST00000560562 GCP02774 474 aa19.9■□□□□ 0.78
TNFAIP2-207ENST00000560562 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
TNFAIP2-207ENST00000560562 NLRP6P59044 892 aa19.88■□□□□ 0.77
TNFAIP2-207ENST00000560562 TESK2Q96S53 571 aa19.88■□□□□ 0.77
TNFAIP2-207ENST00000560562 STRN4Q9NRL3 753 aa19.88■□□□□ 0.77
TNFAIP2-207ENST00000560562 SPATA31A1Q5TZJ5 1347 aa19.88■□□□□ 0.77
TNFAIP2-207ENST00000560562 KTN1Q86UP2 1357 aaKnown RBP19.87■□□□□ 0.77
TNFAIP2-207ENST00000560562 COL5A2P05997 1499 aaPredicted RBP19.87■□□□□ 0.77
TNFAIP2-207ENST00000560562 NFAT5O94916 1531 aa19.87■□□□□ 0.77
TNFAIP2-207ENST00000560562 KRT27Q7Z3Y8 459 aa19.86■□□□□ 0.77
TNFAIP2-207ENST00000560562 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 WNK3Q9BYP7 1800 aa19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 A0A0G2JS52 829 aa19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 MYT1Q01538 1121 aa19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 LARP1Q6PKG0 1096 aaKnown RBP19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 ZNF692Q9BU19 519 aaPredicted RBP19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
TNFAIP2-207ENST00000560562 SLC12A5Q9H2X9 1139 aa19.84■□□□□ 0.77
TNFAIP2-207ENST00000560562 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
TNFAIP2-207ENST00000560562 LTN1O94822 1766 aa19.83■□□□□ 0.77
TNFAIP2-207ENST00000560562 TNS1Q9HBL0 1735 aaKnown RBP19.83■□□□□ 0.77
TNFAIP2-207ENST00000560562 TTC21AQ8NDW8 1320 aa19.83■□□□□ 0.76
TNFAIP2-207ENST00000560562 FAM182BQ5T319 152 aa19.83■□□□□ 0.76
TNFAIP2-207ENST00000560562 A0A1W2PP64 1363 aa19.82■□□□□ 0.76
TNFAIP2-207ENST00000560562 RGPD1P0DJD0 1748 aa19.82■□□□□ 0.76
TNFAIP2-207ENST00000560562 PARP4Q9UKK3 1724 aaKnown RBP19.82■□□□□ 0.76
TNFAIP2-207ENST00000560562 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
TNFAIP2-207ENST00000560562 USP47Q96K76 1375 aa19.81■□□□□ 0.76
TNFAIP2-207ENST00000560562 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
TNFAIP2-207ENST00000560562 TMC1Q8TDI8 760 aa19.81■□□□□ 0.76
TNFAIP2-207ENST00000560562 USP35Q9P2H5 1018 aa19.81■□□□□ 0.76
TNFAIP2-207ENST00000560562 CCDC125Q86Z20 511 aa19.8■□□□□ 0.76
TNFAIP2-207ENST00000560562 EVA1CP58658 441 aa19.79■□□□□ 0.76
TNFAIP2-207ENST00000560562 DEFB132Q7Z7B7 95 aa19.79■□□□□ 0.76
TNFAIP2-207ENST00000560562 NME9Q86XW9 330 aa19.79■□□□□ 0.76
TNFAIP2-207ENST00000560562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
TNFAIP2-207ENST00000560562 AXIN2Q9Y2T1 843 aa19.79■□□□□ 0.76
TNFAIP2-207ENST00000560562 SOX12O15370 315 aa19.78■□□□□ 0.76
TNFAIP2-207ENST00000560562 EDC4Q6P2E9 1401 aaKnown RBP19.78■□□□□ 0.76
TNFAIP2-207ENST00000560562 USP31Q70CQ4 1352 aa19.78■□□□□ 0.76
TNFAIP2-207ENST00000560562 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
TNFAIP2-207ENST00000560562 LRRC37A3O60309 1634 aa19.78■□□□□ 0.76
TNFAIP2-207ENST00000560562 ARHGEF25Q86VW2 580 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms