RNA–Protein interactions for RNA: ENST00000560460.5

RMDN3-208, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-208ENST00000560460 MYT1Q01538 1121 aa28.37■■■□□ 2.13
RMDN3-208ENST00000560460 NUDT16Q96DE0 195 aaKnown RBP28.37■■■□□ 2.13
RMDN3-208ENST00000560460 BTG4Q9NY30 223 aa28.37■■■□□ 2.13
RMDN3-208ENST00000560460 ATP7BP35670 1465 aa28.37■■■□□ 2.13
RMDN3-208ENST00000560460 NRAPQ86VF7 1730 aa28.37■■■□□ 2.13
RMDN3-208ENST00000560460 COL14A1Q05707 1796 aaKnown RBP28.36■■■□□ 2.13
RMDN3-208ENST00000560460 KIAA1210Q9ULL0 1709 aa28.33■■■□□ 2.13
RMDN3-208ENST00000560460 CRYBG1Q9Y4K1 1723 aa28.33■■■□□ 2.13
RMDN3-208ENST00000560460 ONECUT3O60422 494 aaPredicted RBP28.33■■■□□ 2.13
RMDN3-208ENST00000560460 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
RMDN3-208ENST00000560460 CDK19Q9BWU1 502 aa28.32■■■□□ 2.12
RMDN3-208ENST00000560460 SF3B2Q13435 895 aaKnown RBP28.31■■■□□ 2.12
RMDN3-208ENST00000560460 FAM98CQ17RN3 349 aaKnown RBP28.31■■■□□ 2.12
RMDN3-208ENST00000560460 DEFB132Q7Z7B7 95 aa28.29■■■□□ 2.12
RMDN3-208ENST00000560460 PRDM11Q9NQV5 511 aa28.29■■■□□ 2.12
RMDN3-208ENST00000560460 TOPAZ1Q8N9V7 1692 aa28.27■■■□□ 2.12
RMDN3-208ENST00000560460 NBPF1Q3BBV0 1214 aa28.26■■■□□ 2.11
RMDN3-208ENST00000560460 ACEP12821 1306 aa28.24■■■□□ 2.11
RMDN3-208ENST00000560460 NUTM2GQ5VZR2 741 aa28.24■■■□□ 2.11
RMDN3-208ENST00000560460 CCDC61Q9Y6R9 512 aa28.24■■■□□ 2.11
RMDN3-208ENST00000560460 PHRF1Q9P1Y6 1649 aaKnown RBP28.24■■■□□ 2.11
RMDN3-208ENST00000560460 KIAA0232Q92628 1395 aa28.24■■■□□ 2.11
RMDN3-208ENST00000560460 SPATA31A5Q5VU36 1347 aa28.23■■■□□ 2.11
RMDN3-208ENST00000560460 SPATA31A7Q8IWB4 1347 aa28.23■■■□□ 2.11
RMDN3-208ENST00000560460 POLR3AO14802 1390 aaPredicted RBP28.22■■■□□ 2.11
RMDN3-208ENST00000560460 CHRNA2Q15822 529 aa28.21■■■□□ 2.11
RMDN3-208ENST00000560460 NBPF8Q3BBV2 869 aa28.21■■■□□ 2.11
RMDN3-208ENST00000560460 ZC3H6P61129 1189 aaKnown RBP28.19■■■□□ 2.1
RMDN3-208ENST00000560460 PLEKHG3A1L390 1219 aa28.18■■■□□ 2.1
RMDN3-208ENST00000560460 SRPK2P78362 688 aaKnown RBP28.18■■■□□ 2.1
RMDN3-208ENST00000560460 CENPJQ9HC77 1338 aaPredicted RBP28.18■■■□□ 2.1
RMDN3-208ENST00000560460 STRN4Q9NRL3 753 aa28.17■■■□□ 2.1
RMDN3-208ENST00000560460 THSD7AQ9UPZ6 1657 aa28.16■■■□□ 2.1
RMDN3-208ENST00000560460 FAM182BQ5T319 152 aa28.15■■■□□ 2.1
RMDN3-208ENST00000560460 ABTB2Q8N961 1025 aa28.15■■■□□ 2.1
RMDN3-208ENST00000560460 QRICH2Q9H0J4 1663 aa28.14■■■□□ 2.1
RMDN3-208ENST00000560460 BAG6P46379 1132 aa28.14■■■□□ 2.1
RMDN3-208ENST00000560460 PPIP5K1Q6PFW1 1433 aa28.14■■■□□ 2.1
RMDN3-208ENST00000560460 CABP2Q9NPB3 220 aa28.13■■■□□ 2.09
RMDN3-208ENST00000560460 SPATA31A1Q5TZJ5 1347 aa28.13■■■□□ 2.09
RMDN3-208ENST00000560460 NRKQ7Z2Y5 1582 aa28.12■■■□□ 2.09
RMDN3-208ENST00000560460 RGPD1P0DJD0 1748 aa28.11■■■□□ 2.09
RMDN3-208ENST00000560460 L3MBTL2Q969R5 705 aa28.1■■■□□ 2.09
RMDN3-208ENST00000560460 EVA1CP58658 441 aa28.09■■■□□ 2.09
RMDN3-208ENST00000560460 USP35Q9P2H5 1018 aa28.09■■■□□ 2.09
RMDN3-208ENST00000560460 NLRP13Q86W25 1043 aa28.06■■■□□ 2.08
RMDN3-208ENST00000560460 USP19O94966 1318 aa28.06■■■□□ 2.08
RMDN3-208ENST00000560460 SSH2Q76I76 1423 aa28.06■■■□□ 2.08
RMDN3-208ENST00000560460 EN1Q05925 392 aaPredicted RBP28.05■■■□□ 2.08
RMDN3-208ENST00000560460 SIN3AQ96ST3 1273 aa28.05■■■□□ 2.08
RMDN3-208ENST00000560460 CAMTA1Q9Y6Y1 1673 aa28.04■■■□□ 2.08
RMDN3-208ENST00000560460 CPDO75976 1380 aa28.04■■■□□ 2.08
RMDN3-208ENST00000560460 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
RMDN3-208ENST00000560460 CABP1Q9NZU7 370 aa28.03■■■□□ 2.08
RMDN3-208ENST00000560460 TRPM1Q7Z4N2 1603 aa28.03■■■□□ 2.08
RMDN3-208ENST00000560460 TNS1Q9HBL0 1735 aaKnown RBP28.02■■■□□ 2.08
RMDN3-208ENST00000560460 PSDA5PKW4 1024 aaPredicted RBP28.02■■■□□ 2.08
RMDN3-208ENST00000560460 GCP02774 474 aa28.02■■■□□ 2.08
RMDN3-208ENST00000560460 NEUROD1Q13562 356 aa28.02■■■□□ 2.08
RMDN3-208ENST00000560460 LMO7Q8WWI1 1683 aa28.02■■■□□ 2.08
RMDN3-208ENST00000560460 LARP1Q6PKG0 1096 aaKnown RBP28.01■■■□□ 2.07
RMDN3-208ENST00000560460 USP6P35125 1406 aa28.01■■■□□ 2.07
RMDN3-208ENST00000560460 BRD4O60885 1362 aaPredicted RBP28■■■□□ 2.07
RMDN3-208ENST00000560460 EVC2Q86UK5 1308 aa27.99■■■□□ 2.07
RMDN3-208ENST00000560460 ZBTB7CA1YPR0 619 aa27.99■■■□□ 2.07
RMDN3-208ENST00000560460 FAM196AQ6ZSG2 479 aa27.99■■■□□ 2.07
RMDN3-208ENST00000560460 BARGINQ6ZT62 677 aa27.99■■■□□ 2.07
RMDN3-208ENST00000560460 ROCK2O75116 1388 aaKnown RBP27.99■■■□□ 2.07
RMDN3-208ENST00000560460 TRIM37O94972 964 aa27.98■■■□□ 2.07
RMDN3-208ENST00000560460 NLRP6P59044 892 aa27.97■■■□□ 2.07
RMDN3-208ENST00000560460 PDE3BQ13370 1112 aa27.97■■■□□ 2.07
RMDN3-208ENST00000560460 TCP11L2Q8N4U5 519 aa27.97■■■□□ 2.07
RMDN3-208ENST00000560460 DISP2A7MBM2 1401 aa27.97■■■□□ 2.07
RMDN3-208ENST00000560460 LRP5O75197 1615 aa27.95■■■□□ 2.06
RMDN3-208ENST00000560460 COL5A2P05997 1499 aaPredicted RBP27.94■■■□□ 2.06
RMDN3-208ENST00000560460 EZH2Q15910 746 aaKnown RBP27.93■■■□□ 2.06
RMDN3-208ENST00000560460 PIK3C2AO00443 1686 aa27.92■■■□□ 2.06
RMDN3-208ENST00000560460 SLIT3O75094 1523 aa27.92■■■□□ 2.06
RMDN3-208ENST00000560460 APBA3O96018 575 aa27.91■■■□□ 2.06
RMDN3-208ENST00000560460 R3HDM1Q15032 1099 aaKnown RBP27.91■■■□□ 2.06
RMDN3-208ENST00000560460 THRAP3Q9Y2W1 955 aaKnown RBP27.91■■■□□ 2.06
RMDN3-208ENST00000560460 CRB1P82279 1406 aa27.88■■■□□ 2.05
RMDN3-208ENST00000560460 AATKQ6ZMQ8 1374 aa27.87■■■□□ 2.05
RMDN3-208ENST00000560460 PARP4Q9UKK3 1724 aaKnown RBP27.87■■■□□ 2.05
RMDN3-208ENST00000560460 CAMKK2Q96RR4 588 aa27.87■■■□□ 2.05
RMDN3-208ENST00000560460 AKAP12Q02952 1782 aa27.86■■■□□ 2.05
RMDN3-208ENST00000560460 ZNF692Q9BU19 519 aaPredicted RBP27.85■■■□□ 2.05
RMDN3-208ENST00000560460 TTC21BQ7Z4L5 1316 aa27.85■■■□□ 2.05
RMDN3-208ENST00000560460 PARD3Q8TEW0 1356 aa27.84■■■□□ 2.05
RMDN3-208ENST00000560460 SOX12O15370 315 aa27.83■■■□□ 2.05
RMDN3-208ENST00000560460 TOM1L2Q6ZVM7 507 aa27.83■■■□□ 2.05
RMDN3-208ENST00000560460 COL18A1P39060 1754 aa27.82■■■□□ 2.04
RMDN3-208ENST00000560460 CPSF1Q10570 1443 aaKnown RBP27.81■■■□□ 2.04
RMDN3-208ENST00000560460 KTN1Q86UP2 1357 aaKnown RBP27.8■■■□□ 2.04
RMDN3-208ENST00000560460 RREB1Q92766 1687 aa27.8■■■□□ 2.04
RMDN3-208ENST00000560460 TTC21AQ8NDW8 1320 aa27.79■■■□□ 2.04
RMDN3-208ENST00000560460 KCNH5Q8NCM2 988 aa27.79■■■□□ 2.04
RMDN3-208ENST00000560460 AXIN2Q9Y2T1 843 aa27.79■■■□□ 2.04
RMDN3-208ENST00000560460 LRRC37A3O60309 1634 aa27.78■■■□□ 2.04
RMDN3-208ENST00000560460 CLSPNQ9HAW4 1339 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms