RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CLCN1P35523 988 aa6.6□□□□□ -1.35
HMGB3P26-201ENST00000560051 RETREG3Q86VR2 466 aa6.6□□□□□ -1.35
HMGB3P26-201ENST00000560051 IRF7Q92985 503 aa6.6□□□□□ -1.35
HMGB3P26-201ENST00000560051 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB3P26-201ENST00000560051 FAM9AQ8IZU1 332 aaPredicted RBP6.59□□□□□ -1.35
HMGB3P26-201ENST00000560051 GPCPD1Q9NPB8 672 aa6.59□□□□□ -1.35
HMGB3P26-201ENST00000560051 C6orf229H3BNL8 230 aa6.58□□□□□ -1.36
HMGB3P26-201ENST00000560051 NPAS3Q8IXF0 933 aa6.58□□□□□ -1.36
HMGB3P26-201ENST00000560051 HLA-CQ95604 372 aa6.58□□□□□ -1.36
HMGB3P26-201ENST00000560051 PLEKHG3A1L390 1219 aa6.57□□□□□ -1.36
HMGB3P26-201ENST00000560051 MS4A1P11836 297 aa6.57□□□□□ -1.36
HMGB3P26-201ENST00000560051 SYMPKQ92797 1274 aaKnown RBP6.57□□□□□ -1.36
HMGB3P26-201ENST00000560051 FDX1P10109 184 aa6.56□□□□□ -1.36
HMGB3P26-201ENST00000560051 GUCA2AQ02747 115 aa6.56□□□□□ -1.36
HMGB3P26-201ENST00000560051 CCNYL3P0C7X3 344 aa6.55□□□□□ -1.36
HMGB3P26-201ENST00000560051 ZSCAN1Q8NBB4 408 aa6.55□□□□□ -1.36
HMGB3P26-201ENST00000560051 FAM217BQ9NTX9 383 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P26-201ENST00000560051 ARID3CA6NKF2 412 aa6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 SIAH2O43255 324 aa6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 BMP1P13497 986 aa6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 SCARF1Q14162 830 aa6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 PTCRAQ6ISU1 281 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 CCDC102AQ96A19 550 aa6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 PKNOX2Q96KN3 472 aa6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 POLR3GLQ9BT43 218 aa6.54□□□□□ -1.36
HMGB3P26-201ENST00000560051 GMPRP36959 345 aa6.53□□□□□ -1.36
HMGB3P26-201ENST00000560051 SH3BP2P78314 561 aa6.53□□□□□ -1.36
HMGB3P26-201ENST00000560051 KCTD17Q8N5Z5 321 aa6.53□□□□□ -1.36
HMGB3P26-201ENST00000560051 VARSP26640 1264 aaKnown RBP6.52□□□□□ -1.37
HMGB3P26-201ENST00000560051 PTPRNQ16849 979 aa6.52□□□□□ -1.37
HMGB3P26-201ENST00000560051 TRIM46Q7Z4K8 759 aa6.52□□□□□ -1.37
HMGB3P26-201ENST00000560051 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
HMGB3P26-201ENST00000560051 UNC93B1Q9H1C4 597 aa6.52□□□□□ -1.37
HMGB3P26-201ENST00000560051 SLC24A3Q9HC58 644 aa6.52□□□□□ -1.37
HMGB3P26-201ENST00000560051 EVA1BQ9NVM1 165 aa6.52□□□□□ -1.37
HMGB3P26-201ENST00000560051 SPDYE5A6NIY4 337 aa6.51□□□□□ -1.37
HMGB3P26-201ENST00000560051 RAD21O60216 631 aa6.51□□□□□ -1.37
HMGB3P26-201ENST00000560051 LINC01559Q495D7 138 aa6.51□□□□□ -1.37
HMGB3P26-201ENST00000560051 ZFP42Q96MM3 310 aa6.51□□□□□ -1.37
HMGB3P26-201ENST00000560051 H3BM21 787 aa6.5□□□□□ -1.37
HMGB3P26-201ENST00000560051 APBB1O00213 710 aa6.5□□□□□ -1.37
HMGB3P26-201ENST00000560051 VEGFBP49765 207 aa6.5□□□□□ -1.37
HMGB3P26-201ENST00000560051 KCNH2Q12809 1159 aa6.5□□□□□ -1.37
HMGB3P26-201ENST00000560051 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
HMGB3P26-201ENST00000560051 BAP1Q92560 729 aa6.5□□□□□ -1.37
HMGB3P26-201ENST00000560051 CLSTN1O94985 981 aa6.49□□□□□ -1.37
HMGB3P26-201ENST00000560051 CENPBP07199 599 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P26-201ENST00000560051 SSTR3P32745 418 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P26-201ENST00000560051 NNTQ13423 1086 aa6.49□□□□□ -1.37
HMGB3P26-201ENST00000560051 PRR7Q8TB68 274 aa6.49□□□□□ -1.37
HMGB3P26-201ENST00000560051 FAM174AQ8TBP5 190 aa6.49□□□□□ -1.37
HMGB3P26-201ENST00000560051 ZC3H15Q8WU90 426 aaKnown RBP6.49□□□□□ -1.37
HMGB3P26-201ENST00000560051 CTHP32929 405 aa6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 MTMR2Q13614 643 aa6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 TTLL12Q14166 644 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 MRPL14Q6P1L8 145 aaKnown RBP6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 DHX37Q8IY37 1157 aaKnown RBP6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 MPNDQ8N594 471 aa6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 ZNF511Q8NB15 262 aa6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 PCDHGC3Q9UN70 934 aa6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 MTMR7Q9Y216 660 aa6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 TLL2Q9Y6L7 1015 aa6.48□□□□□ -1.37
HMGB3P26-201ENST00000560051 ADH1CP00326 375 aa6.47□□□□□ -1.37
HMGB3P26-201ENST00000560051 WDR4P57081 412 aaKnown RBP6.47□□□□□ -1.37
HMGB3P26-201ENST00000560051 FGD1P98174 961 aa6.47□□□□□ -1.37
HMGB3P26-201ENST00000560051 DIXDC1Q155Q3 683 aa6.47□□□□□ -1.37
HMGB3P26-201ENST00000560051 DESI1Q6ICB0 168 aa6.47□□□□□ -1.37
HMGB3P26-201ENST00000560051 SPIRE2Q8WWL2 714 aa6.47□□□□□ -1.37
HMGB3P26-201ENST00000560051 ZNF428Q96B54 188 aa6.47□□□□□ -1.37
HMGB3P26-201ENST00000560051 UPP2O95045 317 aa6.46□□□□□ -1.38
HMGB3P26-201ENST00000560051 ARID5BQ14865 1188 aa6.46□□□□□ -1.38
HMGB3P26-201ENST00000560051 PURBQ96QR8 312 aaKnown RBP6.46□□□□□ -1.38
HMGB3P26-201ENST00000560051 MOXD2PA6NHM9 499 aa6.45□□□□□ -1.38
HMGB3P26-201ENST00000560051 MAN1A2O60476 641 aa6.45□□□□□ -1.38
HMGB3P26-201ENST00000560051 NDUFV2P19404 249 aa6.45□□□□□ -1.38
HMGB3P26-201ENST00000560051 AGERQ15109 404 aa6.45□□□□□ -1.38
HMGB3P26-201ENST00000560051 TICAM2Q86XR7 235 aa6.44□□□□□ -1.38
HMGB3P26-201ENST00000560051 ERBB4Q15303 1308 aa6.44□□□□□ -1.38
HMGB3P26-201ENST00000560051 TIMP2P16035 220 aa6.43□□□□□ -1.38
HMGB3P26-201ENST00000560051 RBM25P49756 843 aaKnown RBP6.43□□□□□ -1.38
HMGB3P26-201ENST00000560051 FOXD4L5Q5VV16 416 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P26-201ENST00000560051 FOXD4L4Q8WXT5 416 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P26-201ENST00000560051 PSMD1Q99460 953 aa6.43□□□□□ -1.38
HMGB3P26-201ENST00000560051 NR5A1Q13285 461 aa6.42□□□□□ -1.38
HMGB3P26-201ENST00000560051 TRAIPQ9BWF2 469 aa6.42□□□□□ -1.38
HMGB3P26-201ENST00000560051 SPTLC1O15269 473 aa6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 ZIC2O95409 532 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 GJA5P36382 358 aa6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 C6orf118Q5T5N4 469 aa6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 LYPD8Q6UX82 237 aa6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 BEGAINQ9BUH8 593 aa6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P26-201ENST00000560051 BMP2P12643 396 aa6.4□□□□□ -1.38
HMGB3P26-201ENST00000560051 BPHLQ86WA6 291 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P26-201ENST00000560051 CDK15Q96Q40 435 aa6.4□□□□□ -1.38
HMGB3P26-201ENST00000560051 ZBTB3Q9H5J0 574 aa6.4□□□□□ -1.38
HMGB3P26-201ENST00000560051 SOBPA7XYQ1 873 aa6.39□□□□□ -1.39
HMGB3P26-201ENST00000560051 VSIG8P0DPA2 414 aa6.39□□□□□ -1.39
HMGB3P26-201ENST00000560051 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms