RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 QTRT2Q9H974 415 aaKnown RBP21.13■□□□□ 0.97
RPL28-208ENST00000559463 USP21Q9UK80 565 aa21.13■□□□□ 0.97
RPL28-208ENST00000559463 SLIT2O94813 1529 aa21.13■□□□□ 0.97
RPL28-208ENST00000559463 NRAPQ86VF7 1730 aa21.12■□□□□ 0.97
RPL28-208ENST00000559463 ACEP12821 1306 aa21.12■□□□□ 0.97
RPL28-208ENST00000559463 PLEKHG5O94827 1062 aa21.11■□□□□ 0.97
RPL28-208ENST00000559463 CARD11Q9BXL7 1154 aa21.11■□□□□ 0.97
RPL28-208ENST00000559463 RGS12O14924 1447 aa21.11■□□□□ 0.97
RPL28-208ENST00000559463 COL14A1Q05707 1796 aaKnown RBP21.1■□□□□ 0.97
RPL28-208ENST00000559463 EVC2Q86UK5 1308 aa21.09■□□□□ 0.97
RPL28-208ENST00000559463 SBNO2Q9Y2G9 1366 aa21.09■□□□□ 0.97
RPL28-208ENST00000559463 PAK3O75914 559 aaPredicted RBP21.08■□□□□ 0.97
RPL28-208ENST00000559463 RBM6P78332 1123 aaKnown RBP21.08■□□□□ 0.97
RPL28-208ENST00000559463 GLI3P10071 1580 aa21.07■□□□□ 0.96
RPL28-208ENST00000559463 EP400Q96L91 3159 aa21.07■□□□□ 0.96
RPL28-208ENST00000559463 HAP1P54257 671 aaPredicted RBP21.07■□□□□ 0.96
RPL28-208ENST00000559463 TRPC5Q9UL62 973 aaPredicted RBP21.07■□□□□ 0.96
RPL28-208ENST00000559463 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
RPL28-208ENST00000559463 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
RPL28-208ENST00000559463 PIK3C2AO00443 1686 aa21.05■□□□□ 0.96
RPL28-208ENST00000559463 CABP1Q9NZU7 370 aa21.04■□□□□ 0.96
RPL28-208ENST00000559463 BRWD3Q6RI45 1802 aa21.04■□□□□ 0.96
RPL28-208ENST00000559463 USP6P35125 1406 aa21.04■□□□□ 0.96
RPL28-208ENST00000559463 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
RPL28-208ENST00000559463 UNC5CLQ8IV45 518 aa21.03■□□□□ 0.96
RPL28-208ENST00000559463 FAM83GA6ND36 823 aa21.01■□□□□ 0.95
RPL28-208ENST00000559463 NUTM2GQ5VZR2 741 aa21.01■□□□□ 0.95
RPL28-208ENST00000559463 SSH2Q76I76 1423 aa21.01■□□□□ 0.95
RPL28-208ENST00000559463 ATAD2Q6PL18 1390 aa21■□□□□ 0.95
RPL28-208ENST00000559463 BRD4O60885 1362 aaPredicted RBP20.98■□□□□ 0.95
RPL28-208ENST00000559463 GJD4Q96KN9 370 aaPredicted RBP20.98■□□□□ 0.95
RPL28-208ENST00000559463 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
RPL28-208ENST00000559463 USP19O94966 1318 aa20.97■□□□□ 0.95
RPL28-208ENST00000559463 CPSF1Q10570 1443 aaKnown RBP20.96■□□□□ 0.95
RPL28-208ENST00000559463 LMO7Q8WWI1 1683 aa20.96■□□□□ 0.95
RPL28-208ENST00000559463 KIAA0232Q92628 1395 aa20.96■□□□□ 0.95
RPL28-208ENST00000559463 CD163L1Q9NR16 1453 aa20.95■□□□□ 0.94
RPL28-208ENST00000559463 SLIT3O75094 1523 aa20.95■□□□□ 0.94
RPL28-208ENST00000559463 TESK2Q96S53 571 aa20.95■□□□□ 0.94
RPL28-208ENST00000559463 USP54Q70EL1 1684 aa20.94■□□□□ 0.94
RPL28-208ENST00000559463 ST20-MTHFSA0A0A6YYL1 179 aa20.94■□□□□ 0.94
RPL28-208ENST00000559463 VPS72Q15906 364 aa20.94■□□□□ 0.94
RPL28-208ENST00000559463 BTG4Q9NY30 223 aa20.94■□□□□ 0.94
RPL28-208ENST00000559463 TIMELESSQ9UNS1 1208 aa20.94■□□□□ 0.94
RPL28-208ENST00000559463 USP47Q96K76 1375 aa20.93■□□□□ 0.94
RPL28-208ENST00000559463 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
RPL28-208ENST00000559463 PRDM11Q9NQV5 511 aa20.92■□□□□ 0.94
RPL28-208ENST00000559463 ZC3H6P61129 1189 aaKnown RBP20.91■□□□□ 0.94
RPL28-208ENST00000559463 RGPD5Q99666 1765 aa20.91■□□□□ 0.94
RPL28-208ENST00000559463 COL18A1P39060 1754 aa20.9■□□□□ 0.94
RPL28-208ENST00000559463 CPDO75976 1380 aa20.9■□□□□ 0.94
RPL28-208ENST00000559463 KTN1Q86UP2 1357 aaKnown RBP20.9■□□□□ 0.94
RPL28-208ENST00000559463 TTC21BQ7Z4L5 1316 aa20.9■□□□□ 0.94
RPL28-208ENST00000559463 CHRNA2Q15822 529 aa20.9■□□□□ 0.94
RPL28-208ENST00000559463 NLRP13Q86W25 1043 aa20.9■□□□□ 0.94
RPL28-208ENST00000559463 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
RPL28-208ENST00000559463 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
RPL28-208ENST00000559463 CAMTA1Q9Y6Y1 1673 aa20.89■□□□□ 0.94
RPL28-208ENST00000559463 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
RPL28-208ENST00000559463 THSD7AQ9UPZ6 1657 aa20.88■□□□□ 0.93
RPL28-208ENST00000559463 NLRP6P59044 892 aa20.87■□□□□ 0.93
RPL28-208ENST00000559463 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
RPL28-208ENST00000559463 TTC21AQ8NDW8 1320 aa20.86■□□□□ 0.93
RPL28-208ENST00000559463 GCP02774 474 aa20.86■□□□□ 0.93
RPL28-208ENST00000559463 NFAT5O94916 1531 aa20.86■□□□□ 0.93
RPL28-208ENST00000559463 LTN1O94822 1766 aa20.86■□□□□ 0.93
RPL28-208ENST00000559463 MYOM1P52179 1685 aa20.86■□□□□ 0.93
RPL28-208ENST00000559463 TMC1Q8TDI8 760 aa20.85■□□□□ 0.93
RPL28-208ENST00000559463 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
RPL28-208ENST00000559463 A0A1W2PP64 1363 aa20.85■□□□□ 0.93
RPL28-208ENST00000559463 SPATA31A5Q5VU36 1347 aa20.84■□□□□ 0.93
RPL28-208ENST00000559463 SPATA31A7Q8IWB4 1347 aa20.84■□□□□ 0.93
RPL28-208ENST00000559463 ONECUT3O60422 494 aaPredicted RBP20.84■□□□□ 0.93
RPL28-208ENST00000559463 SEPT12Q8IYM1 358 aa20.83■□□□□ 0.93
RPL28-208ENST00000559463 COL5A2P05997 1499 aaPredicted RBP20.82■□□□□ 0.92
RPL28-208ENST00000559463 EDC4Q6P2E9 1401 aaKnown RBP20.82■□□□□ 0.92
RPL28-208ENST00000559463 WNK3Q9BYP7 1800 aa20.82■□□□□ 0.92
RPL28-208ENST00000559463 NINLQ9Y2I6 1382 aa20.82■□□□□ 0.92
RPL28-208ENST00000559463 SLC24A1O60721 1099 aa20.8■□□□□ 0.92
RPL28-208ENST00000559463 FAM98CQ17RN3 349 aaKnown RBP20.8■□□□□ 0.92
RPL28-208ENST00000559463 HDGFL2Q7Z4V5 671 aaPredicted RBP20.8■□□□□ 0.92
RPL28-208ENST00000559463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.8■□□□□ 0.92
RPL28-208ENST00000559463 STRN4Q9NRL3 753 aa20.8■□□□□ 0.92
RPL28-208ENST00000559463 SPATA31A1Q5TZJ5 1347 aa20.79■□□□□ 0.92
RPL28-208ENST00000559463 ZRANB1Q9UGI0 708 aa20.79■□□□□ 0.92
RPL28-208ENST00000559463 USP31Q70CQ4 1352 aa20.79■□□□□ 0.92
RPL28-208ENST00000559463 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
RPL28-208ENST00000559463 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
RPL28-208ENST00000559463 TMF1P82094 1093 aa20.78■□□□□ 0.92
RPL28-208ENST00000559463 NME9Q86XW9 330 aa20.78■□□□□ 0.92
RPL28-208ENST00000559463 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
RPL28-208ENST00000559463 ABCC6O95255 1503 aa20.77■□□□□ 0.92
RPL28-208ENST00000559463 PARP4Q9UKK3 1724 aaKnown RBP20.76■□□□□ 0.91
RPL28-208ENST00000559463 ZBTB7CA1YPR0 619 aa20.76■□□□□ 0.91
RPL28-208ENST00000559463 LARP1Q6PKG0 1096 aaKnown RBP20.76■□□□□ 0.91
RPL28-208ENST00000559463 OVOS2A0A0J9YW53 1432 aa20.76■□□□□ 0.91
RPL28-208ENST00000559463 OVOS2Q6IE36 1432 aa20.76■□□□□ 0.91
RPL28-208ENST00000559463 ANKRD36BQ8N2N9 1353 aa20.75■□□□□ 0.91
RPL28-208ENST00000559463 KCNH5Q8NCM2 988 aa20.75■□□□□ 0.91
RPL28-208ENST00000559463 A0A0G2JS52 829 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms