RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CLTCQ00610 1675 aaKnown RBP21.16■□□□□ 0.98
SPG11-215ENST00000559193 FTSJ3Q8IY81 847 aaKnown RBP21.16■□□□□ 0.98
SPG11-215ENST00000559193 ATAD2Q6PL18 1390 aa21.16■□□□□ 0.98
SPG11-215ENST00000559193 YEATS2Q9ULM3 1422 aa21.15■□□□□ 0.98
SPG11-215ENST00000559193 PREX1Q8TCU6 1659 aa21.15■□□□□ 0.98
SPG11-215ENST00000559193 FYB1O15117 783 aa21.15■□□□□ 0.98
SPG11-215ENST00000559193 BECN1Q14457 450 aa21.15■□□□□ 0.98
SPG11-215ENST00000559193 SMC4Q9NTJ3 1288 aa21.15■□□□□ 0.98
SPG11-215ENST00000559193 MINK1Q8N4C8 1332 aaPredicted RBP21.15■□□□□ 0.98
SPG11-215ENST00000559193 OSCARQ8IYS5 282 aa21.14■□□□□ 0.98
SPG11-215ENST00000559193 TBC1D32Q96NH3 1257 aa21.14■□□□□ 0.98
SPG11-215ENST00000559193 PRAM1Q96QH2 718 aa21.13■□□□□ 0.97
SPG11-215ENST00000559193 YTHDC2Q9H6S0 1430 aaKnown RBP21.13■□□□□ 0.97
SPG11-215ENST00000559193 TRIM27P14373 513 aa21.13■□□□□ 0.97
SPG11-215ENST00000559193 SSH1Q8WYL5 1049 aa21.12■□□□□ 0.97
SPG11-215ENST00000559193 TERF2IPQ9NYB0 399 aa21.12■□□□□ 0.97
SPG11-215ENST00000559193 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
SPG11-215ENST00000559193 BRPF3Q9ULD4 1205 aa21.11■□□□□ 0.97
SPG11-215ENST00000559193 IL16Q14005 1332 aa21.11■□□□□ 0.97
SPG11-215ENST00000559193 RTN4Q9NQC3 1192 aaKnown RBP21.1■□□□□ 0.97
SPG11-215ENST00000559193 ATF7IPQ6VMQ6 1270 aa21.09■□□□□ 0.97
SPG11-215ENST00000559193 POGKQ9P215 609 aa21.09■□□□□ 0.97
SPG11-215ENST00000559193 PNPLA6Q8IY17 1366 aa21.09■□□□□ 0.97
SPG11-215ENST00000559193 SLKQ9H2G2 1235 aaPredicted RBP21.08■□□□□ 0.97
SPG11-215ENST00000559193 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.96
SPG11-215ENST00000559193 ANTXR1Q9H6X2 564 aa21.08■□□□□ 0.96
SPG11-215ENST00000559193 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.96
SPG11-215ENST00000559193 RIPK4P57078 832 aa21.07■□□□□ 0.96
SPG11-215ENST00000559193 ITPRIPQ8IWB1 547 aa21.07■□□□□ 0.96
SPG11-215ENST00000559193 DDX19BQ9UMR2 479 aa21.07■□□□□ 0.96
SPG11-215ENST00000559193 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
SPG11-215ENST00000559193 NOB1Q9ULX3 412 aaKnown RBP21.07■□□□□ 0.96
SPG11-215ENST00000559193 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
SPG11-215ENST00000559193 KIF20BQ96Q89 1820 aa21.06■□□□□ 0.96
SPG11-215ENST00000559193 TBC1D2Q9BYX2 928 aa21.06■□□□□ 0.96
SPG11-215ENST00000559193 CDC42BPGQ6DT37 1551 aa21.06■□□□□ 0.96
SPG11-215ENST00000559193 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
SPG11-215ENST00000559193 HDGFL2Q7Z4V5 671 aaPredicted RBP21.05■□□□□ 0.96
SPG11-215ENST00000559193 CDK19Q9BWU1 502 aa21.04■□□□□ 0.96
SPG11-215ENST00000559193 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
SPG11-215ENST00000559193 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
SPG11-215ENST00000559193 CABP1Q9NZU7 370 aa21.03■□□□□ 0.96
SPG11-215ENST00000559193 SMC5Q8IY18 1101 aa21.02■□□□□ 0.96
SPG11-215ENST00000559193 KIF16BQ96L93 1317 aa21.02■□□□□ 0.95
SPG11-215ENST00000559193 ZBTB40Q9NUA8 1239 aa21.01■□□□□ 0.95
SPG11-215ENST00000559193 PNNQ9H307 717 aaKnown RBP21.01■□□□□ 0.95
SPG11-215ENST00000559193 FAM135BQ49AJ0 1406 aa21■□□□□ 0.95
SPG11-215ENST00000559193 FCHSD2O94868 740 aa20.99■□□□□ 0.95
SPG11-215ENST00000559193 RSPH6AQ9H0K4 717 aa20.99■□□□□ 0.95
SPG11-215ENST00000559193 ALDH1L2Q3SY69 923 aa20.98■□□□□ 0.95
SPG11-215ENST00000559193 C22orf23Q9BZE7 217 aa20.98■□□□□ 0.95
SPG11-215ENST00000559193 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
SPG11-215ENST00000559193 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
SPG11-215ENST00000559193 PRKAR2BP31323 418 aa20.97■□□□□ 0.95
SPG11-215ENST00000559193 POLKQ9UBT6 870 aa20.97■□□□□ 0.95
SPG11-215ENST00000559193 FBLN1P23142 703 aa20.96■□□□□ 0.95
SPG11-215ENST00000559193 ATP7BP35670 1465 aa20.96■□□□□ 0.95
SPG11-215ENST00000559193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.96■□□□□ 0.95
SPG11-215ENST00000559193 DLC1Q96QB1 1528 aa20.96■□□□□ 0.95
SPG11-215ENST00000559193 PPIP5K1Q6PFW1 1433 aa20.96■□□□□ 0.95
SPG11-215ENST00000559193 NUCB1Q02818 461 aa20.93■□□□□ 0.94
SPG11-215ENST00000559193 WAPLQ7Z5K2 1190 aa20.93■□□□□ 0.94
SPG11-215ENST00000559193 BRPF1P55201 1214 aaPredicted RBP20.92■□□□□ 0.94
SPG11-215ENST00000559193 STAG3Q9UJ98 1225 aa20.92■□□□□ 0.94
SPG11-215ENST00000559193 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
SPG11-215ENST00000559193 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
SPG11-215ENST00000559193 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
SPG11-215ENST00000559193 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
SPG11-215ENST00000559193 PHACTR3Q96KR7 559 aa20.92■□□□□ 0.94
SPG11-215ENST00000559193 SPRYD3Q8NCJ5 442 aa20.92■□□□□ 0.94
SPG11-215ENST00000559193 NFE2L2Q16236 605 aa20.91■□□□□ 0.94
SPG11-215ENST00000559193 A2ML1A8K2U0 1454 aa20.91■□□□□ 0.94
SPG11-215ENST00000559193 ZNF428Q96B54 188 aa20.91■□□□□ 0.94
SPG11-215ENST00000559193 HMOX1P09601 288 aa20.9■□□□□ 0.94
SPG11-215ENST00000559193 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
SPG11-215ENST00000559193 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
SPG11-215ENST00000559193 EMILIN1Q9Y6C2 1016 aa20.89■□□□□ 0.93
SPG11-215ENST00000559193 PTCH1Q13635 1447 aa20.88■□□□□ 0.93
SPG11-215ENST00000559193 PIK3R4Q99570 1358 aa20.88■□□□□ 0.93
SPG11-215ENST00000559193 VAMP4O75379 141 aa20.88■□□□□ 0.93
SPG11-215ENST00000559193 CHD1LQ86WJ1 897 aa20.88■□□□□ 0.93
SPG11-215ENST00000559193 MRPL50Q8N5N7 158 aaKnown RBP20.88■□□□□ 0.93
SPG11-215ENST00000559193 MAP2P11137 1827 aaKnown RBP20.88■□□□□ 0.93
SPG11-215ENST00000559193 CPSF1Q10570 1443 aaKnown RBP20.88■□□□□ 0.93
SPG11-215ENST00000559193 RIMS2Q9UQ26 1411 aa20.88■□□□□ 0.93
SPG11-215ENST00000559193 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
SPG11-215ENST00000559193 TSPYL6Q8N831 410 aa20.87■□□□□ 0.93
SPG11-215ENST00000559193 CDK12Q9NYV4 1490 aaPredicted RBP20.87■□□□□ 0.93
SPG11-215ENST00000559193 ZBTB7BO15156 539 aaPredicted RBP20.86■□□□□ 0.93
SPG11-215ENST00000559193 IL13P35225 146 aa20.86■□□□□ 0.93
SPG11-215ENST00000559193 SPATA31D1Q6ZQQ2 1576 aa20.86■□□□□ 0.93
SPG11-215ENST00000559193 NME9Q86XW9 330 aa20.85■□□□□ 0.93
SPG11-215ENST00000559193 ARHGAP45Q92619 1136 aa20.85■□□□□ 0.93
SPG11-215ENST00000559193 IFT57Q9NWB7 429 aa20.85■□□□□ 0.93
SPG11-215ENST00000559193 CHMP5Q9NZZ3 219 aa20.85■□□□□ 0.93
SPG11-215ENST00000559193 REREQ9P2R6 1566 aa20.84■□□□□ 0.93
SPG11-215ENST00000559193 ZNF853P0CG23 659 aa20.84■□□□□ 0.93
SPG11-215ENST00000559193 MCM4P33991 863 aa20.84■□□□□ 0.93
SPG11-215ENST00000559193 RBM25P49756 843 aaKnown RBP20.84■□□□□ 0.93
SPG11-215ENST00000559193 CALD1Q05682 793 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms