RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 ABCC1P33527 1531 aa7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 KDM6BO15054 1643 aa7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 TBC1D12O60347 775 aa7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 GOPCQ9HD26 462 aa7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 TMA7Q9Y2S6 64 aaKnown RBP7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 LMOD3Q0VAK6 560 aa7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 TBC1D2Q9BYX2 928 aa7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 CHPF2Q9P2E5 772 aa7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 FAN1Q9Y2M0 1017 aa7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 U2SURPO15042 1029 aaKnown RBP7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 GSE1Q14687 1217 aa7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 MTA3Q9BTC8 594 aa7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 KIDINS220Q9ULH0 1771 aa7.49□□□□□ -1.21
CTDSPL2-206ENST00000559175 APPP05067 770 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 SF3A1Q15459 793 aaKnown RBP7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 GIGYF2Q6Y7W6 1299 aaKnown RBP7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 KRBA2Q6ZNG9 492 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 LARGE2Q8N3Y3 721 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 POLR1AO95602 1720 aaPredicted RBP7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 ARHGEF12Q9NZN5 1544 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 CARMIL1Q5VZK9 1371 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 WDHD1O75717 1129 aaPredicted RBP7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 LARP6Q9BRS8 491 aaKnown RBP7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 TANGO6Q9C0B7 1094 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 METTL14Q9HCE5 456 aaKnown RBP7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 HECW2Q9P2P5 1572 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 SHANK2Q9UPX8 1470 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 MROH1Q8NDA8 1641 aa7.48□□□□□ -1.21
CTDSPL2-206ENST00000559175 PTPROQ16827 1216 aa7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 REPIN1Q9BWE0 567 aaKnown RBP7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 UACAQ9BZF9 1416 aa7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 ERCC5P28715 1186 aaPredicted RBP7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 SPACA7Q96KW9 195 aa7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 SOX12O15370 315 aa7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 FECHP22830 423 aa7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 PSME1Q06323 249 aa7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 UNC13BO14795 1591 aa7.47□□□□□ -1.21
CTDSPL2-206ENST00000559175 ADGRL2O95490 1459 aa7.46□□□□□ -1.21
CTDSPL2-206ENST00000559175 FHOD3Q2V2M9 1422 aa7.46□□□□□ -1.21
CTDSPL2-206ENST00000559175 LRRC9Q6ZRR7 1453 aa7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 CLGNO14967 610 aa7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 RECKO95980 971 aa7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 GTF2F1P35269 517 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 ZNF467Q7Z7K2 595 aaPredicted RBP7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 ZBTB47Q9UFB7 747 aaPredicted RBP7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 RINLQ6ZS11 566 aa7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 FMN1Q68DA7 1419 aa7.46□□□□□ -1.22
CTDSPL2-206ENST00000559175 SMC5Q8IY18 1101 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 PMFBP1Q8TBY8 1022 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 STAC3Q96MF2 364 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 PRR12Q9ULL5 1215 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 TEX14Q8IWB6 1497 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 IQGAP3Q86VI3 1631 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 GPR37O15354 613 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 CFAP70Q5T0N1 1121 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 NLGN1Q8N2Q7 840 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 PIK3C2BO00750 1634 aa7.45□□□□□ -1.22
CTDSPL2-206ENST00000559175 PREX1Q8TCU6 1659 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 LAMC1P11047 1609 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 LMTK2Q8IWU2 1503 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 AMHR2Q16671 573 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 CCDC144BQ3MJ40 725 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 PIF1Q9H611 641 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 OSCARQ8IYS5 282 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 ADAMTS19Q8TE59 1207 aa7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 PRG4Q92954 1404 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL2-206ENST00000559175 IRF6O14896 467 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 PYGBP11216 843 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 HDGFL1Q5TGJ6 251 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 CCDC189A1A4V9 331 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 TMEM88BA6NKF7 163 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 POLD1P28340 1107 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 CCDC181Q5TID7 509 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 CREBRFQ8IUR6 639 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 HELBQ8NG08 1087 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 UBA5Q9GZZ9 404 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 TBC1D2BQ9UPU7 963 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 ABCA6Q8N139 1617 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 DIP2CQ9Y2E4 1556 aa7.43□□□□□ -1.22
CTDSPL2-206ENST00000559175 SPDYE2BA6NHP3 402 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 SPDYE5A6NIY4 337 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 SPDYE6P0CI01 402 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 SPDYE2Q495Y8 402 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 WDR78Q5VTH9 848 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 C11orf96Q7Z7L8 435 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 SAMD9LQ8IVG5 1584 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 NCKAP5LQ9HCH0 1330 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 NUTM2FA1L443 756 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 SCNN1AP37088 669 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 ATP10BO94823 1461 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 NCOA2Q15596 1464 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 LMOD1P29536 600 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 APLP1P51693 650 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 SDE2Q6IQ49 451 aa7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 TDRD9Q8NDG6 1382 aaKnown RBP7.42□□□□□ -1.22
CTDSPL2-206ENST00000559175 ERCC3P19447 782 aa7.41□□□□□ -1.22
CTDSPL2-206ENST00000559175 TSHZ1Q6ZSZ6 1077 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms