RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.09□□□□□ -0.63
AC090888.3-201ENST00000558917 PRSS12P56730 875 aa11.09□□□□□ -0.63
AC090888.3-201ENST00000558917 SYNMO15061 1565 aa11.08□□□□□ -0.64
AC090888.3-201ENST00000558917 ARHGAP5Q13017 1502 aa11.08□□□□□ -0.64
AC090888.3-201ENST00000558917 LRP6O75581 1613 aa11.07□□□□□ -0.64
AC090888.3-201ENST00000558917 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
AC090888.3-201ENST00000558917 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
AC090888.3-201ENST00000558917 ABCC1P33527 1531 aa11.06□□□□□ -0.64
AC090888.3-201ENST00000558917 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
AC090888.3-201ENST00000558917 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
AC090888.3-201ENST00000558917 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
AC090888.3-201ENST00000558917 ANKLE2Q86XL3 938 aa11.05□□□□□ -0.64
AC090888.3-201ENST00000558917 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
AC090888.3-201ENST00000558917 CDC42BPBQ9Y5S2 1711 aa11.05□□□□□ -0.64
AC090888.3-201ENST00000558917 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
AC090888.3-201ENST00000558917 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
AC090888.3-201ENST00000558917 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
AC090888.3-201ENST00000558917 TATDN2Q93075 761 aa11.04□□□□□ -0.64
AC090888.3-201ENST00000558917 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
AC090888.3-201ENST00000558917 ROBO1Q9Y6N7 1651 aa11.04□□□□□ -0.64
AC090888.3-201ENST00000558917 PLXNC1O60486 1568 aa11.03□□□□□ -0.64
AC090888.3-201ENST00000558917 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
AC090888.3-201ENST00000558917 C3orf80F5H4A9 247 aa11.02□□□□□ -0.65
AC090888.3-201ENST00000558917 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
AC090888.3-201ENST00000558917 SAMD9LQ8IVG5 1584 aa11.02□□□□□ -0.65
AC090888.3-201ENST00000558917 TNRQ92752 1358 aa11.02□□□□□ -0.65
AC090888.3-201ENST00000558917 EP400Q96L91 3159 aa11.02□□□□□ -0.65
AC090888.3-201ENST00000558917 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
AC090888.3-201ENST00000558917 RNF40O75150 1001 aa11.01□□□□□ -0.65
AC090888.3-201ENST00000558917 OSBPP22059 807 aa11.01□□□□□ -0.65
AC090888.3-201ENST00000558917 RANGAP1P46060 587 aaPredicted RBP11.01□□□□□ -0.65
AC090888.3-201ENST00000558917 Q6ZNB5 142 aa11.01□□□□□ -0.65
AC090888.3-201ENST00000558917 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
AC090888.3-201ENST00000558917 GGT6Q6P531 493 aa11□□□□□ -0.65
AC090888.3-201ENST00000558917 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
AC090888.3-201ENST00000558917 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
AC090888.3-201ENST00000558917 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
AC090888.3-201ENST00000558917 JCADQ9P266 1359 aa10.98□□□□□ -0.65
AC090888.3-201ENST00000558917 RXRBP28702 533 aa10.97□□□□□ -0.65
AC090888.3-201ENST00000558917 ZNF772Q68DY9 489 aaPredicted RBP10.97□□□□□ -0.65
AC090888.3-201ENST00000558917 RTN4Q9NQC3 1192 aaKnown RBP10.97□□□□□ -0.65
AC090888.3-201ENST00000558917 RGS12O14924 1447 aa10.97□□□□□ -0.65
AC090888.3-201ENST00000558917 UGGT1Q9NYU2 1555 aa10.96□□□□□ -0.65
AC090888.3-201ENST00000558917 A2MP01023 1474 aa10.96□□□□□ -0.65
AC090888.3-201ENST00000558917 TROQ12816 1431 aaPredicted RBP10.96□□□□□ -0.65
AC090888.3-201ENST00000558917 MTRQ99707 1265 aa10.96□□□□□ -0.65
AC090888.3-201ENST00000558917 COL16A1Q07092 1604 aaPredicted RBP10.95□□□□□ -0.66
AC090888.3-201ENST00000558917 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
AC090888.3-201ENST00000558917 MAP3K1Q13233 1512 aa10.95□□□□□ -0.66
AC090888.3-201ENST00000558917 THEMISQ8N1K5 641 aaPredicted RBP10.95□□□□□ -0.66
AC090888.3-201ENST00000558917 IL21Q9HBE4 155 aa10.95□□□□□ -0.66
AC090888.3-201ENST00000558917 PHLPP1O60346 1717 aa10.95□□□□□ -0.66
AC090888.3-201ENST00000558917 RBM27Q9P2N5 1060 aaKnown RBP10.94□□□□□ -0.66
AC090888.3-201ENST00000558917 PZPP20742 1482 aa10.93□□□□□ -0.66
AC090888.3-201ENST00000558917 MIA2Q96PC5 1412 aa10.93□□□□□ -0.66
AC090888.3-201ENST00000558917 TMEM94Q12767 1356 aa10.93□□□□□ -0.66
AC090888.3-201ENST00000558917 ATP7AQ04656 1500 aa10.93□□□□□ -0.66
AC090888.3-201ENST00000558917 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
AC090888.3-201ENST00000558917 SPAG9O60271 1321 aaKnown RBP10.92□□□□□ -0.66
AC090888.3-201ENST00000558917 INO80Q9ULG1 1556 aaPredicted RBP10.92□□□□□ -0.66
AC090888.3-201ENST00000558917 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
AC090888.3-201ENST00000558917 SYCP2Q9BX26 1530 aa10.91□□□□□ -0.66
AC090888.3-201ENST00000558917 KDM5DQ9BY66 1539 aa10.91□□□□□ -0.66
AC090888.3-201ENST00000558917 ZNF516Q92618 1163 aa10.91□□□□□ -0.66
AC090888.3-201ENST00000558917 PRKD2Q9BZL6 878 aa10.91□□□□□ -0.66
AC090888.3-201ENST00000558917 NLRP1Q9C000 1473 aa10.91□□□□□ -0.66
AC090888.3-201ENST00000558917 GFRA3O60609 400 aa10.9□□□□□ -0.66
AC090888.3-201ENST00000558917 LTKP29376 864 aa10.9□□□□□ -0.66
AC090888.3-201ENST00000558917 APLP1P51693 650 aa10.9□□□□□ -0.66
AC090888.3-201ENST00000558917 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
AC090888.3-201ENST00000558917 PPP1R18Q6NYC8 613 aa10.9□□□□□ -0.66
AC090888.3-201ENST00000558917 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
AC090888.3-201ENST00000558917 LRRIQ1Q96JM4 1722 aa10.89□□□□□ -0.67
AC090888.3-201ENST00000558917 HNRNPMP52272 730 aaKnown RBP eCLIP10.89□□□□□ -0.67
AC090888.3-201ENST00000558917 LAPTM4AQ15012 233 aa10.89□□□□□ -0.67
AC090888.3-201ENST00000558917 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
AC090888.3-201ENST00000558917 SPATA31A6Q5VVP1 1343 aa10.88□□□□□ -0.67
AC090888.3-201ENST00000558917 CDC42BPAQ5VT25 1732 aa10.88□□□□□ -0.67
AC090888.3-201ENST00000558917 NECTIN2Q92692 538 aa10.88□□□□□ -0.67
AC090888.3-201ENST00000558917 AFF2P51816 1311 aa10.87□□□□□ -0.67
AC090888.3-201ENST00000558917 SLF2Q8IX21 1173 aa10.87□□□□□ -0.67
AC090888.3-201ENST00000558917 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
AC090888.3-201ENST00000558917 SCAF11Q99590 1463 aaKnown RBP10.87□□□□□ -0.67
AC090888.3-201ENST00000558917 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 NUTM2BA6NNL0 878 aaPredicted RBP10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 NUTM2EB1AL46 878 aaPredicted RBP10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 NUTM2AQ8IVF1 878 aaPredicted RBP10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 LRP5O75197 1615 aa10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 NCOA2Q15596 1464 aa10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 LRRC9Q6ZRR7 1453 aa10.86□□□□□ -0.67
AC090888.3-201ENST00000558917 SHPRHQ149N8 1683 aa10.85□□□□□ -0.67
AC090888.3-201ENST00000558917 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
AC090888.3-201ENST00000558917 COPS2P61201 443 aa10.85□□□□□ -0.67
AC090888.3-201ENST00000558917 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.85□□□□□ -0.67
AC090888.3-201ENST00000558917 SLAIN2Q9P270 581 aa10.85□□□□□ -0.67
AC090888.3-201ENST00000558917 ATP1B4Q9UN42 357 aaPredicted RBP10.85□□□□□ -0.67
AC090888.3-201ENST00000558917 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
AC090888.3-201ENST00000558917 CLIP1P30622 1438 aa10.84□□□□□ -0.67
AC090888.3-201ENST00000558917 DIP2AQ14689 1571 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms