RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
AC012409.1-202ENST00000558449 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
AC012409.1-202ENST00000558449 FBXO45P0C2W1 286 aa11.35□□□□□ -0.59
AC012409.1-202ENST00000558449 CTHP32929 405 aa11.34□□□□□ -0.59
AC012409.1-202ENST00000558449 MSS51Q4VC12 460 aa11.32□□□□□ -0.6
AC012409.1-202ENST00000558449 TBC1D9Q6ZT07 1266 aa11.32□□□□□ -0.6
AC012409.1-202ENST00000558449 FAM160A2Q8N612 972 aaPredicted RBP11.32□□□□□ -0.6
AC012409.1-202ENST00000558449 SPSB2Q99619 263 aa11.32□□□□□ -0.6
AC012409.1-202ENST00000558449 ZC3H4Q9UPT8 1303 aaKnown RBP11.32□□□□□ -0.6
AC012409.1-202ENST00000558449 CSB-PGBD3P0DP91 1061 aa11.31□□□□□ -0.6
AC012409.1-202ENST00000558449 CDCA8Q53HL2 280 aa11.31□□□□□ -0.6
AC012409.1-202ENST00000558449 EVA1BQ9NVM1 165 aa11.31□□□□□ -0.6
AC012409.1-202ENST00000558449 MAFBQ9Y5Q3 323 aaPredicted RBP11.31□□□□□ -0.6
AC012409.1-202ENST00000558449 DXOO77932 396 aaKnown RBP11.3□□□□□ -0.6
AC012409.1-202ENST00000558449 COPS2P61201 443 aa11.3□□□□□ -0.6
AC012409.1-202ENST00000558449 ATP9BO43861 1147 aa11.29□□□□□ -0.6
AC012409.1-202ENST00000558449 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
AC012409.1-202ENST00000558449 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
AC012409.1-202ENST00000558449 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
AC012409.1-202ENST00000558449 MMP16P51512 607 aa11.28□□□□□ -0.6
AC012409.1-202ENST00000558449 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
AC012409.1-202ENST00000558449 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
AC012409.1-202ENST00000558449 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
AC012409.1-202ENST00000558449 ATG7O95352 703 aa11.26□□□□□ -0.61
AC012409.1-202ENST00000558449 PRDM9Q9NQV7 894 aa11.26□□□□□ -0.61
AC012409.1-202ENST00000558449 CCDC9Q9Y3X0 531 aaKnown RBP11.26□□□□□ -0.61
AC012409.1-202ENST00000558449 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
AC012409.1-202ENST00000558449 PTK2Q05397 1052 aa11.25□□□□□ -0.61
AC012409.1-202ENST00000558449 PDXDC2PQ6P474 469 aa11.25□□□□□ -0.61
AC012409.1-202ENST00000558449 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
AC012409.1-202ENST00000558449 KRTAP3-3Q9BYR6 98 aa11.25□□□□□ -0.61
AC012409.1-202ENST00000558449 KRTAP3-2Q9BYR7 98 aa11.25□□□□□ -0.61
AC012409.1-202ENST00000558449 CARNS1A5YM72 827 aa11.24□□□□□ -0.61
AC012409.1-202ENST00000558449 ZPR1O75312 459 aa11.24□□□□□ -0.61
AC012409.1-202ENST00000558449 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.61
AC012409.1-202ENST00000558449 VRTNQ9H8Y1 702 aa11.24□□□□□ -0.61
AC012409.1-202ENST00000558449 GPSM3Q9Y4H4 160 aa11.24□□□□□ -0.61
AC012409.1-202ENST00000558449 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
AC012409.1-202ENST00000558449 TLL1O43897 1013 aa11.22□□□□□ -0.61
AC012409.1-202ENST00000558449 ADH1BP00325 375 aa11.22□□□□□ -0.61
AC012409.1-202ENST00000558449 SKIP12755 728 aa11.22□□□□□ -0.61
AC012409.1-202ENST00000558449 KANK4Q5T7N3 995 aaPredicted RBP11.22□□□□□ -0.61
AC012409.1-202ENST00000558449 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
AC012409.1-202ENST00000558449 OCSTAMPQ9BR26 566 aa11.22□□□□□ -0.61
AC012409.1-202ENST00000558449 NBPF14Q5TI25 921 aa11.21□□□□□ -0.61
AC012409.1-202ENST00000558449 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.61
AC012409.1-202ENST00000558449 BRD1O95696 1058 aa11.2□□□□□ -0.62
AC012409.1-202ENST00000558449 MCCD1P59942 119 aaPredicted RBP11.2□□□□□ -0.62
AC012409.1-202ENST00000558449 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
AC012409.1-202ENST00000558449 MTRQ99707 1265 aa11.2□□□□□ -0.62
AC012409.1-202ENST00000558449 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
AC012409.1-202ENST00000558449 FAM174AQ8TBP5 190 aa11.19□□□□□ -0.62
AC012409.1-202ENST00000558449 ZNF592Q92610 1267 aa11.19□□□□□ -0.62
AC012409.1-202ENST00000558449 PCDHB9Q9Y5E1 797 aa11.19□□□□□ -0.62
AC012409.1-202ENST00000558449 TMEM88BA6NKF7 163 aa11.18□□□□□ -0.62
AC012409.1-202ENST00000558449 PTCRAQ6ISU1 281 aaPredicted RBP11.18□□□□□ -0.62
AC012409.1-202ENST00000558449 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
AC012409.1-202ENST00000558449 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 POTEMA6NI47 508 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 USP17L5A8MUK1 530 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 PATL2C9JE40 543 aaKnown RBP11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 PLEKHM2Q8IWE5 1019 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 ARHGAP9Q9BRR9 750 aa11.17□□□□□ -0.62
AC012409.1-202ENST00000558449 PTPN5P54829 565 aa11.16□□□□□ -0.62
AC012409.1-202ENST00000558449 KCNA1Q09470 495 aa11.16□□□□□ -0.62
AC012409.1-202ENST00000558449 DEPDC4Q8N2C3 294 aa11.16□□□□□ -0.62
AC012409.1-202ENST00000558449 PHTF2Q8N3S3 785 aa11.16□□□□□ -0.62
AC012409.1-202ENST00000558449 ADAM32Q8TC27 787 aa11.16□□□□□ -0.62
AC012409.1-202ENST00000558449 ZNF516Q92618 1163 aa11.16□□□□□ -0.62
AC012409.1-202ENST00000558449 SLC6A16Q9GZN6 736 aa11.16□□□□□ -0.62
AC012409.1-202ENST00000558449 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
AC012409.1-202ENST00000558449 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
AC012409.1-202ENST00000558449 ZBTB33Q86T24 672 aa11.15□□□□□ -0.62
AC012409.1-202ENST00000558449 RNF135Q8IUD6 432 aa11.15□□□□□ -0.62
AC012409.1-202ENST00000558449 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
AC012409.1-202ENST00000558449 SH3BP5LQ7L8J4 393 aa11.14□□□□□ -0.63
AC012409.1-202ENST00000558449 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
AC012409.1-202ENST00000558449 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
AC012409.1-202ENST00000558449 TMCO4Q5TGY1 634 aa11.12□□□□□ -0.63
AC012409.1-202ENST00000558449 PLPP7Q8NBV4 271 aa11.12□□□□□ -0.63
AC012409.1-202ENST00000558449 NCOA4Q13772 614 aa11.11□□□□□ -0.63
AC012409.1-202ENST00000558449 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
AC012409.1-202ENST00000558449 DZIP3Q86Y13 1208 aaKnown RBP11.11□□□□□ -0.63
AC012409.1-202ENST00000558449 ZMIZ1Q9ULJ6 1067 aa11.11□□□□□ -0.63
AC012409.1-202ENST00000558449 NOVA2Q9UNW9 492 aaKnown RBP11.11□□□□□ -0.63
AC012409.1-202ENST00000558449 LZTS3O60299 673 aaPredicted RBP11.1□□□□□ -0.63
AC012409.1-202ENST00000558449 BAP1Q92560 729 aa11.1□□□□□ -0.63
AC012409.1-202ENST00000558449 CHIC2Q9UKJ5 165 aa11.1□□□□□ -0.63
AC012409.1-202ENST00000558449 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
AC012409.1-202ENST00000558449 MAP7D1Q3KQU3 841 aa11.09□□□□□ -0.63
AC012409.1-202ENST00000558449 TSGA10IPQ3SY00 556 aa11.09□□□□□ -0.63
AC012409.1-202ENST00000558449 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
AC012409.1-202ENST00000558449 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
AC012409.1-202ENST00000558449 NKX2-3Q8TAU0 364 aa11.09□□□□□ -0.63
AC012409.1-202ENST00000558449 STK32AQ8WU08 396 aa11.09□□□□□ -0.63
AC012409.1-202ENST00000558449 CARD14Q9BXL6 1004 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms