RNA–Protein interactions for RNA: ENST00000558388.6

AC012236.1-202, humanhuman

TSL 2 BASIC

Gene AC012236.1, Length 1,024 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012236.1-202ENST00000558388 QTRT2Q9H974 415 aaKnown RBP16.52■□□□□ 0.24
AC012236.1-202ENST00000558388 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
AC012236.1-202ENST00000558388 MARF1Q9Y4F3 1742 aaKnown RBP16.52■□□□□ 0.24
AC012236.1-202ENST00000558388 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
AC012236.1-202ENST00000558388 SLC24A1O60721 1099 aa16.51■□□□□ 0.23
AC012236.1-202ENST00000558388 PHF8Q9UPP1 1060 aa16.51■□□□□ 0.23
AC012236.1-202ENST00000558388 KIF7Q2M1P5 1343 aa16.5■□□□□ 0.23
AC012236.1-202ENST00000558388 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
AC012236.1-202ENST00000558388 TESK2Q96S53 571 aa16.5■□□□□ 0.23
AC012236.1-202ENST00000558388 ADGRB2O60241 1585 aa16.5■□□□□ 0.23
AC012236.1-202ENST00000558388 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
AC012236.1-202ENST00000558388 TMF1P82094 1093 aa16.49■□□□□ 0.23
AC012236.1-202ENST00000558388 DDX10Q13206 875 aaKnown RBP16.49■□□□□ 0.23
AC012236.1-202ENST00000558388 POLA2Q14181 598 aa16.49■□□□□ 0.23
AC012236.1-202ENST00000558388 CENPJQ9HC77 1338 aaPredicted RBP16.48■□□□□ 0.23
AC012236.1-202ENST00000558388 RGS12O14924 1447 aa16.48■□□□□ 0.23
AC012236.1-202ENST00000558388 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
AC012236.1-202ENST00000558388 USP21Q9UK80 565 aa16.48■□□□□ 0.23
AC012236.1-202ENST00000558388 SBNO2Q9Y2G9 1366 aa16.46■□□□□ 0.23
AC012236.1-202ENST00000558388 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
AC012236.1-202ENST00000558388 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
AC012236.1-202ENST00000558388 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
AC012236.1-202ENST00000558388 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
AC012236.1-202ENST00000558388 ABCA3Q99758 1704 aa16.45■□□□□ 0.22
AC012236.1-202ENST00000558388 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
AC012236.1-202ENST00000558388 LMOD2Q6P5Q4 547 aa16.44■□□□□ 0.22
AC012236.1-202ENST00000558388 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
AC012236.1-202ENST00000558388 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
AC012236.1-202ENST00000558388 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
AC012236.1-202ENST00000558388 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
AC012236.1-202ENST00000558388 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
AC012236.1-202ENST00000558388 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
AC012236.1-202ENST00000558388 PSME1Q06323 249 aa16.43■□□□□ 0.22
AC012236.1-202ENST00000558388 ATRNO75882 1429 aa16.43■□□□□ 0.22
AC012236.1-202ENST00000558388 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
AC012236.1-202ENST00000558388 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
AC012236.1-202ENST00000558388 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
AC012236.1-202ENST00000558388 TRPC5Q9UL62 973 aaPredicted RBP16.4■□□□□ 0.22
AC012236.1-202ENST00000558388 ALS2Q96Q42 1657 aa16.4■□□□□ 0.22
AC012236.1-202ENST00000558388 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
AC012236.1-202ENST00000558388 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
AC012236.1-202ENST00000558388 ATP7BP35670 1465 aa16.39■□□□□ 0.21
AC012236.1-202ENST00000558388 PLCH1Q4KWH8 1693 aa16.39■□□□□ 0.21
AC012236.1-202ENST00000558388 SLIT2O94813 1529 aa16.38■□□□□ 0.21
AC012236.1-202ENST00000558388 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
AC012236.1-202ENST00000558388 GLI3P10071 1580 aa16.37■□□□□ 0.21
AC012236.1-202ENST00000558388 EVC2Q86UK5 1308 aa16.37■□□□□ 0.21
AC012236.1-202ENST00000558388 ITSN1Q15811 1721 aa16.36■□□□□ 0.21
AC012236.1-202ENST00000558388 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.36■□□□□ 0.21
AC012236.1-202ENST00000558388 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
AC012236.1-202ENST00000558388 TOPAZ1Q8N9V7 1692 aa16.36■□□□□ 0.21
AC012236.1-202ENST00000558388 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
AC012236.1-202ENST00000558388 PAK3O75914 559 aaPredicted RBP16.35■□□□□ 0.21
AC012236.1-202ENST00000558388 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
AC012236.1-202ENST00000558388 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
AC012236.1-202ENST00000558388 FAM83GA6ND36 823 aa16.34■□□□□ 0.21
AC012236.1-202ENST00000558388 NUTM2GQ5VZR2 741 aa16.34■□□□□ 0.21
AC012236.1-202ENST00000558388 GJD4Q96KN9 370 aaPredicted RBP16.34■□□□□ 0.21
AC012236.1-202ENST00000558388 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.21
AC012236.1-202ENST00000558388 ANP32CO43423 234 aa16.33■□□□□ 0.2
AC012236.1-202ENST00000558388 CABP2Q9NPB3 220 aa16.33■□□□□ 0.2
AC012236.1-202ENST00000558388 ARHGEF10O15013 1369 aa16.33■□□□□ 0.2
AC012236.1-202ENST00000558388 MIER1Q8N108 512 aa16.32■□□□□ 0.2
AC012236.1-202ENST00000558388 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
AC012236.1-202ENST00000558388 ACEP12821 1306 aa16.31■□□□□ 0.2
AC012236.1-202ENST00000558388 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
AC012236.1-202ENST00000558388 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
AC012236.1-202ENST00000558388 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
AC012236.1-202ENST00000558388 PANK3Q9H999 370 aa16.28■□□□□ 0.2
AC012236.1-202ENST00000558388 CCDC9Q9Y3X0 531 aaKnown RBP16.28■□□□□ 0.2
AC012236.1-202ENST00000558388 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
AC012236.1-202ENST00000558388 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.2
AC012236.1-202ENST00000558388 BTG4Q9NY30 223 aa16.27■□□□□ 0.2
AC012236.1-202ENST00000558388 MYOM1P52179 1685 aa16.27■□□□□ 0.19
AC012236.1-202ENST00000558388 PPIP5K1Q6PFW1 1433 aa16.27■□□□□ 0.19
AC012236.1-202ENST00000558388 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
AC012236.1-202ENST00000558388 COL14A1Q05707 1796 aaKnown RBP16.26■□□□□ 0.19
AC012236.1-202ENST00000558388 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
AC012236.1-202ENST00000558388 CHRNA2Q15822 529 aa16.26■□□□□ 0.19
AC012236.1-202ENST00000558388 VPS72Q15906 364 aa16.26■□□□□ 0.19
AC012236.1-202ENST00000558388 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
AC012236.1-202ENST00000558388 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
AC012236.1-202ENST00000558388 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
AC012236.1-202ENST00000558388 ZC3H6P61129 1189 aaKnown RBP16.24■□□□□ 0.19
AC012236.1-202ENST00000558388 SEPT12Q8IYM1 358 aa16.24■□□□□ 0.19
AC012236.1-202ENST00000558388 CABP1Q9NZU7 370 aa16.24■□□□□ 0.19
AC012236.1-202ENST00000558388 KIAA0232Q92628 1395 aa16.23■□□□□ 0.19
AC012236.1-202ENST00000558388 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
AC012236.1-202ENST00000558388 ATXN8OSP0DMR3 200 aa16.22■□□□□ 0.19
AC012236.1-202ENST00000558388 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
AC012236.1-202ENST00000558388 NRKQ7Z2Y5 1582 aa16.21■□□□□ 0.19
AC012236.1-202ENST00000558388 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.19
AC012236.1-202ENST00000558388 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
AC012236.1-202ENST00000558388 SLC12A5Q9H2X9 1139 aa16.21■□□□□ 0.19
AC012236.1-202ENST00000558388 KNSTRNQ9Y448 316 aa16.21■□□□□ 0.19
AC012236.1-202ENST00000558388 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
AC012236.1-202ENST00000558388 ANKRD36BQ8N2N9 1353 aa16.19■□□□□ 0.18
AC012236.1-202ENST00000558388 A0A0G2JS52 829 aa16.19■□□□□ 0.18
AC012236.1-202ENST00000558388 CCER2I3L3R5 266 aa16.19■□□□□ 0.18
AC012236.1-202ENST00000558388 MYT1Q01538 1121 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms