RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 USP17L15C9J2P7 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L10C9JJH3 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L13C9JLJ4 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L11C9JVI0 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L21D6R901 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L18D6R9N7 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L22D6RA61 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L17D6RBQ6 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L19D6RCP7 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L20D6RJB6 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 USP17L24Q0WX57 530 aa10.84□□□□□ -0.67
ZEB1-210ENST00000557827 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
ZEB1-210ENST00000557827 DESI1Q6ICB0 168 aa10.83□□□□□ -0.68
ZEB1-210ENST00000557827 LARP1Q6PKG0 1096 aaKnown RBP10.83□□□□□ -0.68
ZEB1-210ENST00000557827 RETREG3Q86VR2 466 aa10.83□□□□□ -0.68
ZEB1-210ENST00000557827 FAM174AQ8TBP5 190 aa10.83□□□□□ -0.68
ZEB1-210ENST00000557827 FAM200AQ8TCP9 573 aa10.83□□□□□ -0.68
ZEB1-210ENST00000557827 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
ZEB1-210ENST00000557827 SERPINB4P48594 390 aa10.82□□□□□ -0.68
ZEB1-210ENST00000557827 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
ZEB1-210ENST00000557827 MARSP56192 900 aaKnown RBP10.82□□□□□ -0.68
ZEB1-210ENST00000557827 PTK7Q13308 1070 aa10.82□□□□□ -0.68
ZEB1-210ENST00000557827 LYPD8Q6UX82 237 aa10.82□□□□□ -0.68
ZEB1-210ENST00000557827 CDCA7Q9BWT1 371 aaPredicted RBP10.82□□□□□ -0.68
ZEB1-210ENST00000557827 RASA1P20936 1047 aa10.81□□□□□ -0.68
ZEB1-210ENST00000557827 PUS7Q96PZ0 661 aaKnown RBP10.81□□□□□ -0.68
ZEB1-210ENST00000557827 CFHP08603 1231 aa10.8□□□□□ -0.68
ZEB1-210ENST00000557827 HSP90B1P14625 803 aaKnown RBP10.8□□□□□ -0.68
ZEB1-210ENST00000557827 GIPC2Q8TF65 315 aa10.8□□□□□ -0.68
ZEB1-210ENST00000557827 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
ZEB1-210ENST00000557827 ATP2B4P23634 1241 aa10.79□□□□□ -0.68
ZEB1-210ENST00000557827 FKBPLQ9UIM3 349 aa10.79□□□□□ -0.68
ZEB1-210ENST00000557827 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
ZEB1-210ENST00000557827 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
ZEB1-210ENST00000557827 BIN2Q9UBW5 565 aaPredicted RBP10.78□□□□□ -0.68
ZEB1-210ENST00000557827 ANKRD33BA6NCL7 494 aa10.77□□□□□ -0.69
ZEB1-210ENST00000557827 NCOA4Q13772 614 aa10.77□□□□□ -0.69
ZEB1-210ENST00000557827 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
ZEB1-210ENST00000557827 TCF3P15923 654 aa10.76□□□□□ -0.69
ZEB1-210ENST00000557827 CEP126Q9P2H0 1117 aa10.76□□□□□ -0.69
ZEB1-210ENST00000557827 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
ZEB1-210ENST00000557827 POTEMA6NI47 508 aa10.75□□□□□ -0.69
ZEB1-210ENST00000557827 SCNN1AP37088 669 aa10.75□□□□□ -0.69
ZEB1-210ENST00000557827 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
ZEB1-210ENST00000557827 NPAS4Q8IUM7 802 aa10.75□□□□□ -0.69
ZEB1-210ENST00000557827 LZTS3O60299 673 aaPredicted RBP10.74□□□□□ -0.69
ZEB1-210ENST00000557827 Q3C1V9 767 aa10.74□□□□□ -0.69
ZEB1-210ENST00000557827 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
ZEB1-210ENST00000557827 MORN1Q5T089 497 aa10.74□□□□□ -0.69
ZEB1-210ENST00000557827 RABGEF1Q9UJ41 708 aa10.74□□□□□ -0.69
ZEB1-210ENST00000557827 SLC27A5Q9Y2P5 690 aa10.74□□□□□ -0.69
ZEB1-210ENST00000557827 DPYDQ12882 1025 aa10.73□□□□□ -0.69
ZEB1-210ENST00000557827 SWI5Q1ZZU3 235 aa10.73□□□□□ -0.69
ZEB1-210ENST00000557827 PHTF2Q8N3S3 785 aa10.73□□□□□ -0.69
ZEB1-210ENST00000557827 ZC3H4Q9UPT8 1303 aaKnown RBP10.73□□□□□ -0.69
ZEB1-210ENST00000557827 ZNF326Q5BKZ1 582 aaKnown RBP10.72□□□□□ -0.69
ZEB1-210ENST00000557827 SAMD7Q7Z3H4 446 aa10.72□□□□□ -0.69
ZEB1-210ENST00000557827 C1orf216Q8TAB5 229 aa10.72□□□□□ -0.69
ZEB1-210ENST00000557827 F12P00748 615 aaPredicted RBP10.71□□□□□ -0.69
ZEB1-210ENST00000557827 PUS10Q3MIT2 529 aaKnown RBP10.71□□□□□ -0.69
ZEB1-210ENST00000557827 KMT5BQ4FZB7 885 aa10.71□□□□□ -0.69
ZEB1-210ENST00000557827 RNF135Q8IUD6 432 aa10.71□□□□□ -0.69
ZEB1-210ENST00000557827 PLPP7Q8NBV4 271 aa10.71□□□□□ -0.69
ZEB1-210ENST00000557827 PCDH10Q9P2E7 1040 aa10.71□□□□□ -0.69
ZEB1-210ENST00000557827 ST18O60284 1047 aa10.7□□□□□ -0.7
ZEB1-210ENST00000557827 KCNH2Q12809 1159 aa10.7□□□□□ -0.7
ZEB1-210ENST00000557827 FAM98CQ17RN3 349 aaKnown RBP10.7□□□□□ -0.7
ZEB1-210ENST00000557827 FAM177A1Q8N128 213 aaPredicted RBP10.7□□□□□ -0.7
ZEB1-210ENST00000557827 OGFOD1Q8N543 542 aa10.7□□□□□ -0.7
ZEB1-210ENST00000557827 VAMP1P23763 118 aa10.69□□□□□ -0.7
ZEB1-210ENST00000557827 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
ZEB1-210ENST00000557827 CDK11BP21127 795 aaKnown RBP10.68□□□□□ -0.7
ZEB1-210ENST00000557827 MCCD1P59942 119 aaPredicted RBP10.68□□□□□ -0.7
ZEB1-210ENST00000557827 ZNF592Q92610 1267 aa10.68□□□□□ -0.7
ZEB1-210ENST00000557827 ZNF594Q96JF6 807 aaPredicted RBP10.68□□□□□ -0.7
ZEB1-210ENST00000557827 MAP10Q9P2G4 905 aa10.68□□□□□ -0.7
ZEB1-210ENST00000557827 CDK11AQ9UQ88 783 aaPredicted RBP10.68□□□□□ -0.7
ZEB1-210ENST00000557827 CLDN10P78369 228 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 EML3Q32P44 896 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 MAP7D1Q3KQU3 841 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 RNF19BQ6ZMZ0 732 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 DRC1Q96MC2 740 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 C8orf37Q96NL8 207 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 USB1Q9BQ65 265 aaKnown RBP10.67□□□□□ -0.7
ZEB1-210ENST00000557827 EGFL7Q9UHF1 273 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 CHIC2Q9UKJ5 165 aa10.67□□□□□ -0.7
ZEB1-210ENST00000557827 RNF40O75150 1001 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 ABL1P00519 1130 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 PSEN2P49810 448 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 TRIM50Q86XT4 487 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 SLC4A5Q9BY07 1137 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 DNAAF2Q9NVR5 837 aaKnown RBP10.66□□□□□ -0.7
ZEB1-210ENST00000557827 GPSM3Q9Y4H4 160 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 PCDHB9Q9Y5E1 797 aa10.66□□□□□ -0.7
ZEB1-210ENST00000557827 ACTN4O43707 911 aaKnown RBP10.65□□□□□ -0.7
ZEB1-210ENST00000557827 PRMT3O60678 531 aa10.65□□□□□ -0.7
ZEB1-210ENST00000557827 PTK2Q05397 1052 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms