RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 ITSN2Q9NZM3 1697 aa9.28□□□□□ -0.92
FOXN3-218ENST00000557718 TROQ12816 1431 aaPredicted RBP9.28□□□□□ -0.92
FOXN3-218ENST00000557718 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
FOXN3-218ENST00000557718 ABCC10Q5T3U5 1492 aa9.28□□□□□ -0.92
FOXN3-218ENST00000557718 PREX2Q70Z35 1606 aa9.27□□□□□ -0.92
FOXN3-218ENST00000557718 CYB5RLQ6IPT4 315 aa9.27□□□□□ -0.93
FOXN3-218ENST00000557718 GPIHBP1Q8IV16 184 aa9.27□□□□□ -0.93
FOXN3-218ENST00000557718 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.93
FOXN3-218ENST00000557718 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.93
FOXN3-218ENST00000557718 RDH13Q8NBN7 331 aa9.26□□□□□ -0.93
FOXN3-218ENST00000557718 PHOX2BQ99453 314 aa9.26□□□□□ -0.93
FOXN3-218ENST00000557718 WDR7Q9Y4E6 1490 aa9.26□□□□□ -0.93
FOXN3-218ENST00000557718 DIP2BQ9P265 1576 aa9.25□□□□□ -0.93
FOXN3-218ENST00000557718 ASXL2Q76L83 1435 aa9.25□□□□□ -0.93
FOXN3-218ENST00000557718 DDX11L8A8MPP1 907 aa9.25□□□□□ -0.93
FOXN3-218ENST00000557718 TRIM67Q6ZTA4 783 aa9.25□□□□□ -0.93
FOXN3-218ENST00000557718 SLC6A16Q9GZN6 736 aa9.25□□□□□ -0.93
FOXN3-218ENST00000557718 PPRC1Q5VV67 1664 aaKnown RBP9.25□□□□□ -0.93
FOXN3-218ENST00000557718 MTUS2Q5JR59 1369 aa9.24□□□□□ -0.93
FOXN3-218ENST00000557718 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
FOXN3-218ENST00000557718 SPRYD7Q5W111 196 aa9.24□□□□□ -0.93
FOXN3-218ENST00000557718 LIAT1Q6ZQX7 453 aa9.24□□□□□ -0.93
FOXN3-218ENST00000557718 MAP3K4Q9Y6R4 1608 aa9.23□□□□□ -0.93
FOXN3-218ENST00000557718 TSPOAP1O95153 1857 aa9.23□□□□□ -0.93
FOXN3-218ENST00000557718 SPSB2Q99619 263 aa9.23□□□□□ -0.93
FOXN3-218ENST00000557718 FUT2Q10981 343 aa9.22□□□□□ -0.93
FOXN3-218ENST00000557718 MORN1Q5T089 497 aa9.22□□□□□ -0.93
FOXN3-218ENST00000557718 ZNF598Q86UK7 904 aaKnown RBP9.22□□□□□ -0.93
FOXN3-218ENST00000557718 PTPN23Q9H3S7 1636 aa9.22□□□□□ -0.93
FOXN3-218ENST00000557718 GLI2P10070 1586 aa9.21□□□□□ -0.93
FOXN3-218ENST00000557718 CROCC2H7BZ55 1655 aa9.21□□□□□ -0.93
FOXN3-218ENST00000557718 GCGRP47871 477 aa9.21□□□□□ -0.94
FOXN3-218ENST00000557718 SULF1Q8IWU6 871 aa9.21□□□□□ -0.94
FOXN3-218ENST00000557718 GPATCH8Q9UKJ3 1502 aaKnown RBP9.21□□□□□ -0.94
FOXN3-218ENST00000557718 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
FOXN3-218ENST00000557718 ATP6V1AP38606 617 aa9.2□□□□□ -0.94
FOXN3-218ENST00000557718 MYOM3Q5VTT5 1437 aa9.2□□□□□ -0.94
FOXN3-218ENST00000557718 RRBP1Q9P2E9 1410 aaKnown RBP9.2□□□□□ -0.94
FOXN3-218ENST00000557718 PLA2G2CQ5R387 149 aa9.19□□□□□ -0.94
FOXN3-218ENST00000557718 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
FOXN3-218ENST00000557718 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
FOXN3-218ENST00000557718 THAP11Q96EK4 314 aa9.19□□□□□ -0.94
FOXN3-218ENST00000557718 FGD6Q6ZV73 1430 aa9.19□□□□□ -0.94
FOXN3-218ENST00000557718 PLEKHD1A6NEE1 506 aa9.18□□□□□ -0.94
FOXN3-218ENST00000557718 PRR20EP86478 221 aa9.18□□□□□ -0.94
FOXN3-218ENST00000557718 PRR20CP86479 221 aa9.18□□□□□ -0.94
FOXN3-218ENST00000557718 PRR20DP86480 221 aa9.18□□□□□ -0.94
FOXN3-218ENST00000557718 PRR20BP86481 221 aa9.18□□□□□ -0.94
FOXN3-218ENST00000557718 PRR20AP86496 221 aa9.18□□□□□ -0.94
FOXN3-218ENST00000557718 TCOF1Q13428 1488 aaKnown RBP9.18□□□□□ -0.94
FOXN3-218ENST00000557718 SLC27A5Q9Y2P5 690 aa9.18□□□□□ -0.94
FOXN3-218ENST00000557718 ARAP3Q8WWN8 1544 aa9.17□□□□□ -0.94
FOXN3-218ENST00000557718 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
FOXN3-218ENST00000557718 DNMT1P26358 1616 aaKnown RBP9.16□□□□□ -0.94
FOXN3-218ENST00000557718 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
FOXN3-218ENST00000557718 CAMSAP2Q08AD1 1489 aa9.15□□□□□ -0.94
FOXN3-218ENST00000557718 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.94
FOXN3-218ENST00000557718 GDF9O60383 454 aa9.15□□□□□ -0.94
FOXN3-218ENST00000557718 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
FOXN3-218ENST00000557718 FAM160A2Q8N612 972 aaPredicted RBP9.15□□□□□ -0.94
FOXN3-218ENST00000557718 ADGBQ8N7X0 1667 aa9.15□□□□□ -0.94
FOXN3-218ENST00000557718 ABCC1P33527 1531 aa9.15□□□□□ -0.95
FOXN3-218ENST00000557718 ARHGAP5Q13017 1502 aa9.15□□□□□ -0.95
FOXN3-218ENST00000557718 MIA2Q96PC5 1412 aa9.14□□□□□ -0.95
FOXN3-218ENST00000557718 CCNB3Q8WWL7 1395 aa9.14□□□□□ -0.95
FOXN3-218ENST00000557718 IRF6O14896 467 aa9.14□□□□□ -0.95
FOXN3-218ENST00000557718 BRICD5Q6PL45 260 aa9.14□□□□□ -0.95
FOXN3-218ENST00000557718 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
FOXN3-218ENST00000557718 CFAP74Q9C0B2 1584 aa9.14□□□□□ -0.95
FOXN3-218ENST00000557718 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
FOXN3-218ENST00000557718 PLCH2O75038 1416 aa9.14□□□□□ -0.95
FOXN3-218ENST00000557718 ARHGEF5Q12774 1597 aa9.13□□□□□ -0.95
FOXN3-218ENST00000557718 TNFRSF10AO00220 468 aa9.13□□□□□ -0.95
FOXN3-218ENST00000557718 PKDCCQ504Y2 493 aa9.13□□□□□ -0.95
FOXN3-218ENST00000557718 ARHGEF12Q9NZN5 1544 aa9.13□□□□□ -0.95
FOXN3-218ENST00000557718 SYCP2Q9BX26 1530 aa9.12□□□□□ -0.95
FOXN3-218ENST00000557718 DGAT1O75907 488 aa9.12□□□□□ -0.95
FOXN3-218ENST00000557718 CD46P15529 392 aa9.12□□□□□ -0.95
FOXN3-218ENST00000557718 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
FOXN3-218ENST00000557718 FCF1Q9Y324 198 aaKnown RBP9.12□□□□□ -0.95
FOXN3-218ENST00000557718 ZNF644Q9H582 1327 aaPredicted RBP9.11□□□□□ -0.95
FOXN3-218ENST00000557718 GCC2Q8IWJ2 1684 aa9.11□□□□□ -0.95
FOXN3-218ENST00000557718 ZNF787Q6DD87 383 aa9.11□□□□□ -0.95
FOXN3-218ENST00000557718 RNF19BQ6ZMZ0 732 aa9.11□□□□□ -0.95
FOXN3-218ENST00000557718 PRDM9Q9NQV7 894 aa9.11□□□□□ -0.95
FOXN3-218ENST00000557718 PTPRKQ15262 1439 aa9.11□□□□□ -0.95
FOXN3-218ENST00000557718 FRMPD1Q5SYB0 1578 aa9.11□□□□□ -0.95
FOXN3-218ENST00000557718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
FOXN3-218ENST00000557718 MINK1Q8N4C8 1332 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-218ENST00000557718 MBD5Q9P267 1494 aa9.1□□□□□ -0.95
FOXN3-218ENST00000557718 RPIAP49247 311 aa9.1□□□□□ -0.95
FOXN3-218ENST00000557718 MYT1Q01538 1121 aa9.1□□□□□ -0.95
FOXN3-218ENST00000557718 TRIM26Q12899 539 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-218ENST00000557718 PKD2L1Q9P0L9 805 aa9.1□□□□□ -0.95
FOXN3-218ENST00000557718 CD109Q6YHK3 1445 aa9.1□□□□□ -0.95
FOXN3-218ENST00000557718 FANCAO15360 1455 aa9.09□□□□□ -0.95
FOXN3-218ENST00000557718 MAST1Q9Y2H9 1570 aa9.09□□□□□ -0.95
FOXN3-218ENST00000557718 FAM187AA6NFU0 413 aa9.09□□□□□ -0.95
FOXN3-218ENST00000557718 MDM2Q00987 491 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-218ENST00000557718 INO80Q9ULG1 1556 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms