RNA–Protein interactions for RNA: ENST00000557557.1

PSMC6-216, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 2,939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-216ENST00000557557 PDE3BQ13370 1112 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 NBPF6Q5VWK0 638 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 NBPF10Q6P3W6 841 aaKnown RBP8.33□□□□□ -1.08
PSMC6-216ENST00000557557 NBPF5PQ86XG9 351 aaPredicted RBP8.33□□□□□ -1.08
PSMC6-216ENST00000557557 OTUD6BQ8N6M0 293 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 NBPF4Q96M43 638 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 MRVI1Q9Y6F6 885 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 SYCE3A1L190 88 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 MCTP1Q6DN14 999 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
PSMC6-216ENST00000557557 PPP1R12AO14974 1030 aaPredicted RBP8.32□□□□□ -1.08
PSMC6-216ENST00000557557 RBM5P52756 815 aaKnown RBP eCLIP8.32□□□□□ -1.08
PSMC6-216ENST00000557557 CWC22Q9HCG8 908 aaKnown RBP8.32□□□□□ -1.08
PSMC6-216ENST00000557557 ARAP1Q96P48 1450 aa8.32□□□□□ -1.08
PSMC6-216ENST00000557557 NCOA1Q15788 1441 aa8.32□□□□□ -1.08
PSMC6-216ENST00000557557 MAPK8IP3Q9UPT6 1336 aa8.32□□□□□ -1.08
PSMC6-216ENST00000557557 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
PSMC6-216ENST00000557557 DDIT3P35638 169 aa8.31□□□□□ -1.08
PSMC6-216ENST00000557557 MAP2K2P36507 400 aa8.31□□□□□ -1.08
PSMC6-216ENST00000557557 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
PSMC6-216ENST00000557557 TMEM132AQ24JP5 1023 aa8.31□□□□□ -1.08
PSMC6-216ENST00000557557 TTC31Q49AM3 519 aaPredicted RBP8.31□□□□□ -1.08
PSMC6-216ENST00000557557 PACS2Q86VP3 889 aa8.31□□□□□ -1.08
PSMC6-216ENST00000557557 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.31□□□□□ -1.08
PSMC6-216ENST00000557557 IPO8O15397 1037 aaKnown RBP8.31□□□□□ -1.08
PSMC6-216ENST00000557557 GTF3C6Q969F1 213 aa8.31□□□□□ -1.08
PSMC6-216ENST00000557557 RBM28Q9NW13 759 aaKnown RBP8.31□□□□□ -1.08
PSMC6-216ENST00000557557 A0A1B0GUL7 405 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 REC8O95072 547 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 BAG4O95429 457 aaKnown RBP8.3□□□□□ -1.08
PSMC6-216ENST00000557557 TTC19Q6DKK2 380 aaPredicted RBP8.3□□□□□ -1.08
PSMC6-216ENST00000557557 ANKRD20A12PQ8NF67 263 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.3□□□□□ -1.08
PSMC6-216ENST00000557557 RAD54L2Q9Y4B4 1467 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.3□□□□□ -1.08
PSMC6-216ENST00000557557 V9GYY5 206 aaPredicted RBP8.3□□□□□ -1.08
PSMC6-216ENST00000557557 CARMIL1Q5VZK9 1371 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 H0YHG0 523 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 SARNPP82979 210 aaKnown RBP8.3□□□□□ -1.08
PSMC6-216ENST00000557557 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 SPTLC3Q9NUV7 552 aa8.3□□□□□ -1.08
PSMC6-216ENST00000557557 RBM6P78332 1123 aaKnown RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 BMS1Q14692 1282 aaKnown RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 ZKSCAN8Q15776 578 aaPredicted RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 CIZ1Q9ULV3 898 aaPredicted RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 LRRFIP2Q9Y608 721 aaKnown RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
PSMC6-216ENST00000557557 POLR3GO15318 223 aaPredicted RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 GSCP56915 257 aaPredicted RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 ZSCAN26Q16670 478 aa8.29□□□□□ -1.08
PSMC6-216ENST00000557557 ZC3H12AQ5D1E8 599 aaKnown RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 RTF1Q92541 710 aaKnown RBP8.29□□□□□ -1.08
PSMC6-216ENST00000557557 CCT2P78371 535 aaKnown RBP8.28□□□□□ -1.08
PSMC6-216ENST00000557557 PLCB2Q00722 1185 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 TTLL5Q6EMB2 1281 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 ARMCX6Q7L4S7 300 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 ATG3Q9NT62 314 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 RRP15Q9Y3B9 282 aaKnown RBP8.28□□□□□ -1.08
PSMC6-216ENST00000557557 POLA1P09884 1462 aaPredicted RBP8.28□□□□□ -1.08
PSMC6-216ENST00000557557 VIRMAQ69YN4 1812 aaKnown RBP8.28□□□□□ -1.08
PSMC6-216ENST00000557557 ARHGAP35Q9NRY4 1499 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 NPHP1O15259 732 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 CAND2O75155 1236 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 MAP9Q49MG5 647 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 LRSAM1Q6UWE0 723 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 SMC5Q8IY18 1101 aa8.28□□□□□ -1.08
PSMC6-216ENST00000557557 DNMBPQ6XZF7 1577 aa8.27□□□□□ -1.08
PSMC6-216ENST00000557557 DHX29Q7Z478 1369 aaKnown RBP8.27□□□□□ -1.08
PSMC6-216ENST00000557557 PRPF40AO75400 957 aaKnown RBP8.27□□□□□ -1.09
PSMC6-216ENST00000557557 CALRP27797 417 aaKnown RBP8.27□□□□□ -1.09
PSMC6-216ENST00000557557 MUM1L1Q5H9M0 696 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 SRLQ86TD4 932 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 CREBRFQ8IUR6 639 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 ITFG2Q969R8 447 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 USP25Q9UHP3 1055 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 LRPPRCP42704 1394 aaKnown RBP8.27□□□□□ -1.09
PSMC6-216ENST00000557557 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 SCP2P22307 547 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
PSMC6-216ENST00000557557 JMYQ8N9B5 988 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.27□□□□□ -1.09
PSMC6-216ENST00000557557 FAM184AQ8NB25 1140 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 PUS7Q96PZ0 661 aaKnown RBP8.27□□□□□ -1.09
PSMC6-216ENST00000557557 SLC24A3Q9HC58 644 aa8.27□□□□□ -1.09
PSMC6-216ENST00000557557 PLEKHD1A6NEE1 506 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 TXLNBQ8N3L3 684 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 C16orf45Q96MC5 204 aaPredicted RBP8.26□□□□□ -1.09
PSMC6-216ENST00000557557 NAIF1Q69YI7 327 aaPredicted RBP8.26□□□□□ -1.09
PSMC6-216ENST00000557557 IRAK4Q9NWZ3 460 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 TMEM63CQ9P1W3 806 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 PYCARDQ9ULZ3 195 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 ABCA10Q8WWZ4 1543 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 KLHL33A6NCF5 533 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 ST5P78524 1137 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
PSMC6-216ENST00000557557 NUTM2GQ5VZR2 741 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 ZNF397Q8NF99 534 aaPredicted RBP8.26□□□□□ -1.09
PSMC6-216ENST00000557557 LMBRD1Q9NUN5 540 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 CWC15Q9P013 229 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms