RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 ANKRD26Q9UPS8 1709 aa11.38□□□□□ -0.59
NEMF-215ENST00000557380 ATP7BP35670 1465 aa11.38□□□□□ -0.59
NEMF-215ENST00000557380 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
NEMF-215ENST00000557380 PPP4R2Q9NY27 417 aa11.38□□□□□ -0.59
NEMF-215ENST00000557380 ADAMTS13Q76LX8 1427 aa11.37□□□□□ -0.59
NEMF-215ENST00000557380 ZNF521Q96K83 1311 aa11.37□□□□□ -0.59
NEMF-215ENST00000557380 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
NEMF-215ENST00000557380 SHPRHQ149N8 1683 aa11.36□□□□□ -0.59
NEMF-215ENST00000557380 PLEKHH1Q9ULM0 1364 aa11.36□□□□□ -0.59
NEMF-215ENST00000557380 GABBR2O75899 941 aa11.35□□□□□ -0.59
NEMF-215ENST00000557380 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
NEMF-215ENST00000557380 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
NEMF-215ENST00000557380 WAPLQ7Z5K2 1190 aa11.35□□□□□ -0.59
NEMF-215ENST00000557380 ADGRB2O60241 1585 aa11.34□□□□□ -0.59
NEMF-215ENST00000557380 DIP2AQ14689 1571 aa11.34□□□□□ -0.59
NEMF-215ENST00000557380 WASLO00401 505 aaPredicted RBP11.34□□□□□ -0.59
NEMF-215ENST00000557380 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
NEMF-215ENST00000557380 RCAN3Q9UKA8 241 aa11.34□□□□□ -0.59
NEMF-215ENST00000557380 EID1Q9Y6B2 187 aa11.34□□□□□ -0.59
NEMF-215ENST00000557380 LTKP29376 864 aa11.33□□□□□ -0.6
NEMF-215ENST00000557380 CEBPAP49715 358 aaPredicted RBP11.33□□□□□ -0.6
NEMF-215ENST00000557380 IRX6P78412 446 aaPredicted RBP11.33□□□□□ -0.6
NEMF-215ENST00000557380 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
NEMF-215ENST00000557380 FYB1O15117 783 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 MTHFSP49914 203 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 MNX1P50219 401 aaPredicted RBP11.32□□□□□ -0.6
NEMF-215ENST00000557380 LHX8Q68G74 356 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 TXNDC2Q86VQ3 553 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 THEMISQ8N1K5 641 aaPredicted RBP11.32□□□□□ -0.6
NEMF-215ENST00000557380 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 CABP1Q9NZU7 370 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 SALL2Q9Y467 1007 aaPredicted RBP11.32□□□□□ -0.6
NEMF-215ENST00000557380 CPSF1Q10570 1443 aaKnown RBP11.32□□□□□ -0.6
NEMF-215ENST00000557380 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 TBX22Q9Y458 520 aa11.32□□□□□ -0.6
NEMF-215ENST00000557380 RRP1P56182 461 aaKnown RBP11.31□□□□□ -0.6
NEMF-215ENST00000557380 CDC42BPGQ6DT37 1551 aa11.31□□□□□ -0.6
NEMF-215ENST00000557380 TRMT2AQ8IZ69 625 aaKnown RBP11.31□□□□□ -0.6
NEMF-215ENST00000557380 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
NEMF-215ENST00000557380 EDC4Q6P2E9 1401 aaKnown RBP11.3□□□□□ -0.6
NEMF-215ENST00000557380 IQSEC2Q5JU85 1478 aa11.3□□□□□ -0.6
NEMF-215ENST00000557380 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
NEMF-215ENST00000557380 ROBO2Q9HCK4 1378 aa11.3□□□□□ -0.6
NEMF-215ENST00000557380 APAF1O14727 1248 aa11.29□□□□□ -0.6
NEMF-215ENST00000557380 SLFN5Q08AF3 891 aa11.29□□□□□ -0.6
NEMF-215ENST00000557380 DUSP27Q5VZP5 1158 aa11.29□□□□□ -0.6
NEMF-215ENST00000557380 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
NEMF-215ENST00000557380 CCDC61Q9Y6R9 512 aa11.29□□□□□ -0.6
NEMF-215ENST00000557380 COL3A1P02461 1466 aaPredicted RBP11.29□□□□□ -0.6
NEMF-215ENST00000557380 PPIP5K1Q6PFW1 1433 aa11.29□□□□□ -0.6
NEMF-215ENST00000557380 MON2Q7Z3U7 1717 aa11.29□□□□□ -0.6
NEMF-215ENST00000557380 PTPRUQ92729 1446 aa11.28□□□□□ -0.6
NEMF-215ENST00000557380 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
NEMF-215ENST00000557380 PNPLA6Q8IY17 1366 aa11.28□□□□□ -0.6
NEMF-215ENST00000557380 PIK3R4Q99570 1358 aa11.28□□□□□ -0.6
NEMF-215ENST00000557380 TNNT2P45379 298 aaPredicted RBP11.28□□□□□ -0.6
NEMF-215ENST00000557380 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
NEMF-215ENST00000557380 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
NEMF-215ENST00000557380 GGNBP2Q9H3C7 697 aa11.28□□□□□ -0.6
NEMF-215ENST00000557380 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
NEMF-215ENST00000557380 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.28□□□□□ -0.6
NEMF-215ENST00000557380 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.6
NEMF-215ENST00000557380 E9PSI1 815 aa11.27□□□□□ -0.61
NEMF-215ENST00000557380 CCDC27Q2M243 656 aa11.27□□□□□ -0.61
NEMF-215ENST00000557380 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
NEMF-215ENST00000557380 TOPAZ1Q8N9V7 1692 aa11.27□□□□□ -0.61
NEMF-215ENST00000557380 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
NEMF-215ENST00000557380 ZNF142P52746 1687 aaPredicted RBP11.26□□□□□ -0.61
NEMF-215ENST00000557380 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
NEMF-215ENST00000557380 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
NEMF-215ENST00000557380 XRN1Q8IZH2 1706 aaKnown RBP11.25□□□□□ -0.61
NEMF-215ENST00000557380 SETD1BQ9UPS6 1966 aaKnown RBP11.25□□□□□ -0.61
NEMF-215ENST00000557380 CLCN6P51797 869 aa11.25□□□□□ -0.61
NEMF-215ENST00000557380 AATKQ6ZMQ8 1374 aa11.25□□□□□ -0.61
NEMF-215ENST00000557380 NKTRP30414 1462 aaKnown RBP11.24□□□□□ -0.61
NEMF-215ENST00000557380 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
NEMF-215ENST00000557380 WDR63Q8IWG1 891 aa11.24□□□□□ -0.61
NEMF-215ENST00000557380 WWC1Q8IX03 1113 aa11.24□□□□□ -0.61
NEMF-215ENST00000557380 PRR36Q9H6K5 1346 aa11.24□□□□□ -0.61
NEMF-215ENST00000557380 TCP11L2Q8N4U5 519 aa11.23□□□□□ -0.61
NEMF-215ENST00000557380 SLC26A8Q96RN1 970 aa11.23□□□□□ -0.61
NEMF-215ENST00000557380 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
NEMF-215ENST00000557380 AMOTL2Q9Y2J4 779 aa11.23□□□□□ -0.61
NEMF-215ENST00000557380 U2AF1L5P0DN76 240 aaPredicted RBP11.23□□□□□ -0.61
NEMF-215ENST00000557380 U2AF1Q01081 240 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEMF-215ENST00000557380 B4GALNT3Q6L9W6 998 aa11.23□□□□□ -0.61
NEMF-215ENST00000557380 PNNQ9H307 717 aaKnown RBP11.23□□□□□ -0.61
NEMF-215ENST00000557380 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
NEMF-215ENST00000557380 DIAPH1O60610 1272 aaKnown RBP11.21□□□□□ -0.61
NEMF-215ENST00000557380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.21□□□□□ -0.61
NEMF-215ENST00000557380 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
NEMF-215ENST00000557380 MAP2P11137 1827 aaKnown RBP11.21□□□□□ -0.61
NEMF-215ENST00000557380 CDK12Q9NYV4 1490 aaPredicted RBP11.21□□□□□ -0.62
NEMF-215ENST00000557380 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.21□□□□□ -0.62
NEMF-215ENST00000557380 CCDC136Q96JN2 1154 aa11.21□□□□□ -0.62
NEMF-215ENST00000557380 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.62
NEMF-215ENST00000557380 POLKQ9UBT6 870 aa11.21□□□□□ -0.62
NEMF-215ENST00000557380 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
NEMF-215ENST00000557380 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms