RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 ADGRB2O60241 1585 aa13.72□□□□□ -0.21
MARK3-211ENST00000556744 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
MARK3-211ENST00000556744 SPATA31A6Q5VVP1 1343 aa13.7□□□□□ -0.22
MARK3-211ENST00000556744 LRRC59Q96AG4 307 aaKnown RBP13.7□□□□□ -0.22
MARK3-211ENST00000556744 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
MARK3-211ENST00000556744 TRAK1Q9UPV9 953 aa13.7□□□□□ -0.22
MARK3-211ENST00000556744 NBPF1Q3BBV0 1214 aa13.69□□□□□ -0.22
MARK3-211ENST00000556744 ILDR2Q71H61 639 aa13.69□□□□□ -0.22
MARK3-211ENST00000556744 ARHGEF28Q8N1W1 1705 aaKnown RBP13.69□□□□□ -0.22
MARK3-211ENST00000556744 ANKARQ7Z5J8 1434 aa13.68□□□□□ -0.22
MARK3-211ENST00000556744 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
MARK3-211ENST00000556744 POGKQ9P215 609 aa13.68□□□□□ -0.22
MARK3-211ENST00000556744 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
MARK3-211ENST00000556744 ESCO1Q5FWF5 840 aa13.67□□□□□ -0.22
MARK3-211ENST00000556744 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
MARK3-211ENST00000556744 PXDNQ92626 1479 aa13.67□□□□□ -0.22
MARK3-211ENST00000556744 NPHP3Q7Z494 1330 aa13.66□□□□□ -0.22
MARK3-211ENST00000556744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
MARK3-211ENST00000556744 NEUROD1Q13562 356 aa13.66□□□□□ -0.22
MARK3-211ENST00000556744 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
MARK3-211ENST00000556744 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
MARK3-211ENST00000556744 KIF1AQ12756 1690 aa13.66□□□□□ -0.22
MARK3-211ENST00000556744 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
MARK3-211ENST00000556744 LRP6O75581 1613 aa13.65□□□□□ -0.22
MARK3-211ENST00000556744 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
MARK3-211ENST00000556744 USP32Q8NFA0 1604 aa13.65□□□□□ -0.22
MARK3-211ENST00000556744 WASLO00401 505 aaPredicted RBP13.65□□□□□ -0.22
MARK3-211ENST00000556744 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
MARK3-211ENST00000556744 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
MARK3-211ENST00000556744 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
MARK3-211ENST00000556744 FOXO3O43524 673 aa13.64□□□□□ -0.23
MARK3-211ENST00000556744 SAFB2Q14151 953 aaKnown RBP eCLIP13.64□□□□□ -0.23
MARK3-211ENST00000556744 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
MARK3-211ENST00000556744 EIF3AQ14152 1382 aaKnown RBP13.63□□□□□ -0.23
MARK3-211ENST00000556744 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
MARK3-211ENST00000556744 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
MARK3-211ENST00000556744 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
MARK3-211ENST00000556744 STK24Q9Y6E0 443 aa13.63□□□□□ -0.23
MARK3-211ENST00000556744 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
MARK3-211ENST00000556744 TULP4Q9NRJ4 1543 aa13.63□□□□□ -0.23
MARK3-211ENST00000556744 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
MARK3-211ENST00000556744 PRR36Q9H6K5 1346 aa13.63□□□□□ -0.23
MARK3-211ENST00000556744 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
MARK3-211ENST00000556744 RYDENQ9NUL5 291 aaKnown RBP13.62□□□□□ -0.23
MARK3-211ENST00000556744 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
MARK3-211ENST00000556744 HIRIP3Q9BW71 556 aaPredicted RBP13.61□□□□□ -0.23
MARK3-211ENST00000556744 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
MARK3-211ENST00000556744 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
MARK3-211ENST00000556744 ATP7BP35670 1465 aa13.59□□□□□ -0.23
MARK3-211ENST00000556744 CENPJQ9HC77 1338 aaPredicted RBP13.59□□□□□ -0.23
MARK3-211ENST00000556744 SBNO1A3KN83 1393 aa13.58□□□□□ -0.23
MARK3-211ENST00000556744 GTPBP6O43824 516 aaPredicted RBP13.58□□□□□ -0.24
MARK3-211ENST00000556744 POTEAQ6S8J7 498 aa13.58□□□□□ -0.24
MARK3-211ENST00000556744 KRT28Q7Z3Y7 464 aa13.58□□□□□ -0.24
MARK3-211ENST00000556744 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
MARK3-211ENST00000556744 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
MARK3-211ENST00000556744 SOCS7O14512 581 aa13.57□□□□□ -0.24
MARK3-211ENST00000556744 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
MARK3-211ENST00000556744 NUDT16Q96DE0 195 aaKnown RBP13.57□□□□□ -0.24
MARK3-211ENST00000556744 CDK19Q9BWU1 502 aa13.57□□□□□ -0.24
MARK3-211ENST00000556744 ROCK2O75116 1388 aaKnown RBP13.57□□□□□ -0.24
MARK3-211ENST00000556744 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
MARK3-211ENST00000556744 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
MARK3-211ENST00000556744 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
MARK3-211ENST00000556744 PSME1Q06323 249 aa13.56□□□□□ -0.24
MARK3-211ENST00000556744 PCGF6Q9BYE7 350 aa13.56□□□□□ -0.24
MARK3-211ENST00000556744 TIMELESSQ9UNS1 1208 aa13.56□□□□□ -0.24
MARK3-211ENST00000556744 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
MARK3-211ENST00000556744 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
MARK3-211ENST00000556744 TOPAZ1Q8N9V7 1692 aa13.55□□□□□ -0.24
MARK3-211ENST00000556744 ITSN1Q15811 1721 aa13.55□□□□□ -0.24
MARK3-211ENST00000556744 TRPM3Q9HCF6 1732 aaPredicted RBP13.55□□□□□ -0.24
MARK3-211ENST00000556744 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
MARK3-211ENST00000556744 TNS3Q68CZ2 1445 aa13.55□□□□□ -0.24
MARK3-211ENST00000556744 QRICH2Q9H0J4 1663 aa13.54□□□□□ -0.24
MARK3-211ENST00000556744 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
MARK3-211ENST00000556744 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
MARK3-211ENST00000556744 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
MARK3-211ENST00000556744 PMFBP1Q8TBY8 1022 aa13.54□□□□□ -0.24
MARK3-211ENST00000556744 SBNO2Q9Y2G9 1366 aa13.54□□□□□ -0.24
MARK3-211ENST00000556744 MEX3CQ5U5Q3 659 aaKnown RBP13.53□□□□□ -0.24
MARK3-211ENST00000556744 FNBP4Q8N3X1 1017 aaPredicted RBP13.53□□□□□ -0.24
MARK3-211ENST00000556744 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
MARK3-211ENST00000556744 ARHGEF10O15013 1369 aa13.52□□□□□ -0.25
MARK3-211ENST00000556744 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
MARK3-211ENST00000556744 MARF1Q9Y4F3 1742 aaKnown RBP13.51□□□□□ -0.25
MARK3-211ENST00000556744 AFF2P51816 1311 aa13.51□□□□□ -0.25
MARK3-211ENST00000556744 CARD11Q9BXL7 1154 aa13.5□□□□□ -0.25
MARK3-211ENST00000556744 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
MARK3-211ENST00000556744 ACEP12821 1306 aa13.49□□□□□ -0.25
MARK3-211ENST00000556744 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
MARK3-211ENST00000556744 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
MARK3-211ENST00000556744 NGDNQ8NEJ9 315 aaKnown RBP13.49□□□□□ -0.25
MARK3-211ENST00000556744 PCDHB8Q9UN66 801 aa13.49□□□□□ -0.25
MARK3-211ENST00000556744 PCDHB13Q9Y5F0 798 aa13.49□□□□□ -0.25
MARK3-211ENST00000556744 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
MARK3-211ENST00000556744 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
MARK3-211ENST00000556744 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
MARK3-211ENST00000556744 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
MARK3-211ENST00000556744 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms