RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 ZNF692Q9BU19 519 aaPredicted RBP34.4■■■■□ 3.1
SDR39U1-221ENST00000556707 CPSF1Q10570 1443 aaKnown RBP34.39■■■■□ 3.1
SDR39U1-221ENST00000556707 ADAMTS2O95450 1211 aa34.39■■■■□ 3.1
SDR39U1-221ENST00000556707 TMC1Q8TDI8 760 aa34.39■■■■□ 3.1
SDR39U1-221ENST00000556707 CDCA8Q53HL2 280 aa34.37■■■■□ 3.09
SDR39U1-221ENST00000556707 SLC12A5Q9H2X9 1139 aa34.37■■■■□ 3.09
SDR39U1-221ENST00000556707 MON2Q7Z3U7 1717 aa34.37■■■■□ 3.09
SDR39U1-221ENST00000556707 CABLES1Q8TDN4 633 aa34.36■■■■□ 3.09
SDR39U1-221ENST00000556707 RGS17Q9UGC6 210 aaPredicted RBP34.36■■■■□ 3.09
SDR39U1-221ENST00000556707 NINLQ9Y2I6 1382 aa34.36■■■■□ 3.09
SDR39U1-221ENST00000556707 CRYBG1Q9Y4K1 1723 aa34.35■■■■□ 3.09
SDR39U1-221ENST00000556707 SSH2Q76I76 1423 aa34.35■■■■□ 3.09
SDR39U1-221ENST00000556707 CD163L1Q9NR16 1453 aa34.34■■■■□ 3.09
SDR39U1-221ENST00000556707 C8orf37Q96NL8 207 aa34.33■■■■□ 3.09
SDR39U1-221ENST00000556707 KTN1Q86UP2 1357 aaKnown RBP34.33■■■■□ 3.09
SDR39U1-221ENST00000556707 PLEKHG5O94827 1062 aa34.32■■■■□ 3.08
SDR39U1-221ENST00000556707 HAP1P54257 671 aaPredicted RBP34.32■■■■□ 3.08
SDR39U1-221ENST00000556707 NRKQ7Z2Y5 1582 aa34.32■■■■□ 3.08
SDR39U1-221ENST00000556707 ABTB2Q8N961 1025 aa34.31■■■■□ 3.08
SDR39U1-221ENST00000556707 HDGFL2Q7Z4V5 671 aaPredicted RBP34.3■■■■□ 3.08
SDR39U1-221ENST00000556707 TERF2IPQ9NYB0 399 aa34.3■■■■□ 3.08
SDR39U1-221ENST00000556707 NUTM2GQ5VZR2 741 aa34.28■■■■□ 3.08
SDR39U1-221ENST00000556707 NGLY1Q96IV0 654 aa34.28■■■■□ 3.08
SDR39U1-221ENST00000556707 AFF2P51816 1311 aa34.28■■■■□ 3.08
SDR39U1-221ENST00000556707 TTC21BQ7Z4L5 1316 aa34.28■■■■□ 3.08
SDR39U1-221ENST00000556707 PIK3C2AO00443 1686 aa34.27■■■■□ 3.08
SDR39U1-221ENST00000556707 PHRF1Q9P1Y6 1649 aaKnown RBP34.26■■■■□ 3.08
SDR39U1-221ENST00000556707 A0A1W2PP64 1363 aa34.26■■■■□ 3.08
SDR39U1-221ENST00000556707 ZNF772Q68DY9 489 aaPredicted RBP34.25■■■■□ 3.07
SDR39U1-221ENST00000556707 TTC21AQ8NDW8 1320 aa34.25■■■■□ 3.07
SDR39U1-221ENST00000556707 MYOM1P52179 1685 aa34.24■■■■□ 3.07
SDR39U1-221ENST00000556707 NLRP13Q86W25 1043 aa34.23■■■■□ 3.07
SDR39U1-221ENST00000556707 USP19O94966 1318 aa34.22■■■■□ 3.07
SDR39U1-221ENST00000556707 EDC4Q6P2E9 1401 aaKnown RBP34.21■■■■□ 3.07
SDR39U1-221ENST00000556707 POTEAQ6S8J7 498 aa34.21■■■■□ 3.07
SDR39U1-221ENST00000556707 FNBP4Q8N3X1 1017 aaPredicted RBP34.21■■■■□ 3.07
SDR39U1-221ENST00000556707 ANKRD36BQ8N2N9 1353 aa34.21■■■■□ 3.07
SDR39U1-221ENST00000556707 NLRP6P59044 892 aa34.2■■■■□ 3.07
SDR39U1-221ENST00000556707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.17■■■■□ 3.06
SDR39U1-221ENST00000556707 PLCH1Q4KWH8 1693 aa34.16■■■■□ 3.06
SDR39U1-221ENST00000556707 ILDR2Q71H61 639 aa34.16■■■■□ 3.06
SDR39U1-221ENST00000556707 USP21Q9UK80 565 aa34.15■■■■□ 3.06
SDR39U1-221ENST00000556707 NWD2Q9ULI1 1742 aa34.15■■■■□ 3.06
SDR39U1-221ENST00000556707 SLIT2O94813 1529 aa34.14■■■■□ 3.06
SDR39U1-221ENST00000556707 COL14A1Q05707 1796 aaKnown RBP34.13■■■■□ 3.05
SDR39U1-221ENST00000556707 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.13■■■■□ 3.05
SDR39U1-221ENST00000556707 USP54Q70EL1 1684 aa34.13■■■■□ 3.05
SDR39U1-221ENST00000556707 FAM83GA6ND36 823 aa34.13■■■■□ 3.05
SDR39U1-221ENST00000556707 POLR3GLQ9BT43 218 aa34.13■■■■□ 3.05
SDR39U1-221ENST00000556707 SLIT3O75094 1523 aa34.13■■■■□ 3.05
SDR39U1-221ENST00000556707 C11orf95C9JLR9 678 aaPredicted RBP34.12■■■■□ 3.05
SDR39U1-221ENST00000556707 BCL9LQ86UU0 1499 aa34.12■■■■□ 3.05
SDR39U1-221ENST00000556707 GCP02774 474 aa34.11■■■■□ 3.05
SDR39U1-221ENST00000556707 NME9Q86XW9 330 aa34.1■■■■□ 3.05
SDR39U1-221ENST00000556707 USP31Q70CQ4 1352 aa34.1■■■■□ 3.05
SDR39U1-221ENST00000556707 KIAA0232Q92628 1395 aa34.1■■■■□ 3.05
SDR39U1-221ENST00000556707 ZC3H6P61129 1189 aaKnown RBP34.09■■■■□ 3.05
SDR39U1-221ENST00000556707 QTRT2Q9H974 415 aaKnown RBP34.09■■■■□ 3.05
SDR39U1-221ENST00000556707 PRDM11Q9NQV5 511 aa34.09■■■■□ 3.05
SDR39U1-221ENST00000556707 CPDO75976 1380 aa34.07■■■■□ 3.04
SDR39U1-221ENST00000556707 UNC5CLQ8IV45 518 aa34.06■■■■□ 3.04
SDR39U1-221ENST00000556707 ZRANB1Q9UGI0 708 aa34.06■■■■□ 3.04
SDR39U1-221ENST00000556707 ATRNO75882 1429 aa34.05■■■■□ 3.04
SDR39U1-221ENST00000556707 TRPC5Q9UL62 973 aaPredicted RBP34.05■■■■□ 3.04
SDR39U1-221ENST00000556707 NRAPQ86VF7 1730 aa34.04■■■■□ 3.04
SDR39U1-221ENST00000556707 CHRNA2Q15822 529 aa34.02■■■■□ 3.04
SDR39U1-221ENST00000556707 KCNH5Q8NCM2 988 aa34.02■■■■□ 3.04
SDR39U1-221ENST00000556707 RXRBP28702 533 aa34.01■■■■□ 3.03
SDR39U1-221ENST00000556707 CARD14Q9BXL6 1004 aa34.01■■■■□ 3.03
SDR39U1-221ENST00000556707 BTG4Q9NY30 223 aa34.01■■■■□ 3.03
SDR39U1-221ENST00000556707 KIF20BQ96Q89 1820 aa34.01■■■■□ 3.03
SDR39U1-221ENST00000556707 KIF7Q2M1P5 1343 aa34.01■■■■□ 3.03
SDR39U1-221ENST00000556707 OVOS2A0A0J9YW53 1432 aa34■■■■□ 3.03
SDR39U1-221ENST00000556707 OVOS2Q6IE36 1432 aa34■■■■□ 3.03
SDR39U1-221ENST00000556707 NFAT5O94916 1531 aa33.99■■■■□ 3.03
SDR39U1-221ENST00000556707 RBM6P78332 1123 aaKnown RBP33.99■■■■□ 3.03
SDR39U1-221ENST00000556707 LMO7Q8WWI1 1683 aa33.98■■■■□ 3.03
SDR39U1-221ENST00000556707 NSD3Q9BZ95 1437 aa33.97■■■■□ 3.03
SDR39U1-221ENST00000556707 FYB1O15117 783 aa33.95■■■■□ 3.03
SDR39U1-221ENST00000556707 SOX12O15370 315 aa33.95■■■■□ 3.03
SDR39U1-221ENST00000556707 COL18A1P39060 1754 aa33.94■■■■□ 3.02
SDR39U1-221ENST00000556707 VPS72Q15906 364 aa33.94■■■■□ 3.02
SDR39U1-221ENST00000556707 COG3Q96JB2 828 aa33.94■■■■□ 3.02
SDR39U1-221ENST00000556707 ARHGEF25Q86VW2 580 aa33.93■■■■□ 3.02
SDR39U1-221ENST00000556707 CDK12Q9NYV4 1490 aaPredicted RBP33.93■■■■□ 3.02
SDR39U1-221ENST00000556707 CAMTA1Q9Y6Y1 1673 aa33.93■■■■□ 3.02
SDR39U1-221ENST00000556707 ZEB1P37275 1124 aaPredicted RBP33.92■■■■□ 3.02
SDR39U1-221ENST00000556707 GJD4Q96KN9 370 aaPredicted RBP33.92■■■■□ 3.02
SDR39U1-221ENST00000556707 PANK3Q9H999 370 aa33.92■■■■□ 3.02
SDR39U1-221ENST00000556707 AATKQ6ZMQ8 1374 aa33.92■■■■□ 3.02
SDR39U1-221ENST00000556707 LTN1O94822 1766 aa33.91■■■■□ 3.02
SDR39U1-221ENST00000556707 ZBTB7CA1YPR0 619 aa33.91■■■■□ 3.02
SDR39U1-221ENST00000556707 CCDC7Q96M83 1385 aa33.9■■■■□ 3.02
SDR39U1-221ENST00000556707 GGNBP2Q9H3C7 697 aa33.9■■■■□ 3.02
SDR39U1-221ENST00000556707 GLI3P10071 1580 aa33.89■■■■□ 3.02
SDR39U1-221ENST00000556707 RGPD5Q99666 1765 aa33.89■■■■□ 3.02
SDR39U1-221ENST00000556707 CGNL1Q0VF96 1302 aa33.87■■■■□ 3.01
SDR39U1-221ENST00000556707 WASHC2AQ641Q2 1341 aa33.87■■■■□ 3.01
SDR39U1-221ENST00000556707 CCDC9Q9Y3X0 531 aaKnown RBP33.86■■■■□ 3.01
SDR39U1-221ENST00000556707 ABCC6O95255 1503 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms