RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 TLL1O43897 1013 aa7.68□□□□□ -1.18
TRAV15-201ENST00000556680 F12P00748 615 aaPredicted RBP7.68□□□□□ -1.18
TRAV15-201ENST00000556680 SOX11P35716 441 aa7.68□□□□□ -1.18
TRAV15-201ENST00000556680 MMP16P51512 607 aa7.68□□□□□ -1.18
TRAV15-201ENST00000556680 KCNH2Q12809 1159 aa7.68□□□□□ -1.18
TRAV15-201ENST00000556680 ARMC2Q8NEN0 867 aa7.68□□□□□ -1.18
TRAV15-201ENST00000556680 ZNF516Q92618 1163 aa7.68□□□□□ -1.18
TRAV15-201ENST00000556680 TJAP1Q5JTD0 557 aa7.67□□□□□ -1.18
TRAV15-201ENST00000556680 SLC6A16Q9GZN6 736 aa7.67□□□□□ -1.18
TRAV15-201ENST00000556680 PRDM9Q9NQV7 894 aa7.67□□□□□ -1.18
TRAV15-201ENST00000556680 ACIN1Q9UKV3 1341 aaKnown RBP7.67□□□□□ -1.18
TRAV15-201ENST00000556680 ZBBXA8MT70 800 aa7.66□□□□□ -1.18
TRAV15-201ENST00000556680 NR1H3Q13133 447 aa7.66□□□□□ -1.18
TRAV15-201ENST00000556680 ADAMTS19Q8TE59 1207 aa7.66□□□□□ -1.18
TRAV15-201ENST00000556680 ALG2Q9H553 416 aa7.66□□□□□ -1.18
TRAV15-201ENST00000556680 ZC3H4Q9UPT8 1303 aaKnown RBP7.66□□□□□ -1.18
TRAV15-201ENST00000556680 FBXO45P0C2W1 286 aa7.64□□□□□ -1.19
TRAV15-201ENST00000556680 RFX1P22670 979 aa7.64□□□□□ -1.19
TRAV15-201ENST00000556680 PTK2Q05397 1052 aa7.64□□□□□ -1.19
TRAV15-201ENST00000556680 PDIA4P13667 645 aaKnown RBP7.63□□□□□ -1.19
TRAV15-201ENST00000556680 NBPF14Q5TI25 921 aa7.63□□□□□ -1.19
TRAV15-201ENST00000556680 PDXDC2PQ6P474 469 aa7.63□□□□□ -1.19
TRAV15-201ENST00000556680 NKX2-3Q8TAU0 364 aa7.63□□□□□ -1.19
TRAV15-201ENST00000556680 GPKOWQ92917 476 aaPredicted RBP eCLIP7.63□□□□□ -1.19
TRAV15-201ENST00000556680 PPP1R15AO75807 674 aaPredicted RBP7.62□□□□□ -1.19
TRAV15-201ENST00000556680 PPP1R12CQ9BZL4 782 aa7.62□□□□□ -1.19
TRAV15-201ENST00000556680 TFIP11Q9UBB9 837 aaKnown RBP7.62□□□□□ -1.19
TRAV15-201ENST00000556680 HCSTQ9UBK5 93 aa7.62□□□□□ -1.19
TRAV15-201ENST00000556680 S1PR4O95977 384 aa7.61□□□□□ -1.19
TRAV15-201ENST00000556680 PTCRAQ6ISU1 281 aaPredicted RBP7.61□□□□□ -1.19
TRAV15-201ENST00000556680 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
TRAV15-201ENST00000556680 UNC93B1Q9H1C4 597 aa7.61□□□□□ -1.19
TRAV15-201ENST00000556680 GPSM3Q9Y4H4 160 aa7.61□□□□□ -1.19
TRAV15-201ENST00000556680 PALM3A6NDB9 673 aaPredicted RBP7.6□□□□□ -1.19
TRAV15-201ENST00000556680 LMOD1P29536 600 aaPredicted RBP7.6□□□□□ -1.19
TRAV15-201ENST00000556680 ZBTB33Q86T24 672 aa7.6□□□□□ -1.19
TRAV15-201ENST00000556680 ARHGAP9Q9BRR9 750 aa7.6□□□□□ -1.19
TRAV15-201ENST00000556680 KCNC4Q03721 635 aa7.59□□□□□ -1.19
TRAV15-201ENST00000556680 AGERQ15109 404 aa7.59□□□□□ -1.19
TRAV15-201ENST00000556680 FCF1Q9Y324 198 aaKnown RBP7.59□□□□□ -1.19
TRAV15-201ENST00000556680 PCDHB9Q9Y5E1 797 aa7.59□□□□□ -1.19
TRAV15-201ENST00000556680 MCCD1P59942 119 aaPredicted RBP7.58□□□□□ -1.2
TRAV15-201ENST00000556680 CFAP70Q5T0N1 1121 aa7.58□□□□□ -1.2
TRAV15-201ENST00000556680 BAP1Q92560 729 aa7.58□□□□□ -1.2
TRAV15-201ENST00000556680 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
TRAV15-201ENST00000556680 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.57□□□□□ -1.2
TRAV15-201ENST00000556680 ZBTB24O43167 697 aaPredicted RBP7.57□□□□□ -1.2
TRAV15-201ENST00000556680 RNF166Q96A37 237 aaPredicted RBP7.57□□□□□ -1.2
TRAV15-201ENST00000556680 PCDH10Q9P2E7 1040 aa7.57□□□□□ -1.2
TRAV15-201ENST00000556680 MAGEB6P1A0A0J9YX57 407 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 GGCXP38435 758 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 SLFNL1Q499Z3 407 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 TBC1D9Q6ZT07 1266 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 BPHLQ86WA6 291 aaPredicted RBP7.56□□□□□ -1.2
TRAV15-201ENST00000556680 DZIP3Q86Y13 1208 aaKnown RBP7.56□□□□□ -1.2
TRAV15-201ENST00000556680 ADAM32Q8TC27 787 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 CARD14Q9BXL6 1004 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 CEP126Q9P2H0 1117 aa7.56□□□□□ -1.2
TRAV15-201ENST00000556680 PPEF1O14829 653 aaPredicted RBP7.55□□□□□ -1.2
TRAV15-201ENST00000556680 ATP9BO43861 1147 aa7.55□□□□□ -1.2
TRAV15-201ENST00000556680 SKIP12755 728 aa7.55□□□□□ -1.2
TRAV15-201ENST00000556680 PDE4CQ08493 712 aa7.55□□□□□ -1.2
TRAV15-201ENST00000556680 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
TRAV15-201ENST00000556680 CDCA8Q53HL2 280 aa7.55□□□□□ -1.2
TRAV15-201ENST00000556680 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
TRAV15-201ENST00000556680 RETREG2Q8NC44 543 aa7.54□□□□□ -1.2
TRAV15-201ENST00000556680 OCSTAMPQ9BR26 566 aa7.54□□□□□ -1.2
TRAV15-201ENST00000556680 MAFBQ9Y5Q3 323 aaPredicted RBP7.54□□□□□ -1.2
TRAV15-201ENST00000556680 PIK3CDO00329 1044 aa7.53□□□□□ -1.2
TRAV15-201ENST00000556680 RNF135Q8IUD6 432 aa7.53□□□□□ -1.2
TRAV15-201ENST00000556680 SPNS2Q8IVW8 549 aa7.53□□□□□ -1.2
TRAV15-201ENST00000556680 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
TRAV15-201ENST00000556680 NFATC2IPQ8NCF5 419 aa7.53□□□□□ -1.2
TRAV15-201ENST00000556680 VRTNQ9H8Y1 702 aa7.53□□□□□ -1.2
TRAV15-201ENST00000556680 ITGBL1O95965 494 aaPredicted RBP7.52□□□□□ -1.21
TRAV15-201ENST00000556680 CSB-PGBD3P0DP91 1061 aa7.52□□□□□ -1.21
TRAV15-201ENST00000556680 FOXJ1Q92949 421 aa7.52□□□□□ -1.21
TRAV15-201ENST00000556680 RNF223E7ERA6 249 aa7.51□□□□□ -1.21
TRAV15-201ENST00000556680 SRPK2P78362 688 aaKnown RBP7.51□□□□□ -1.21
TRAV15-201ENST00000556680 TRAIPQ9BWF2 469 aa7.51□□□□□ -1.21
TRAV15-201ENST00000556680 ZBTB7CA1YPR0 619 aa7.5□□□□□ -1.21
TRAV15-201ENST00000556680 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
TRAV15-201ENST00000556680 SH3RF1Q7Z6J0 888 aa7.5□□□□□ -1.21
TRAV15-201ENST00000556680 ANKLE1Q8NAG6 615 aa7.5□□□□□ -1.21
TRAV15-201ENST00000556680 SLC10A4Q96EP9 437 aa7.5□□□□□ -1.21
TRAV15-201ENST00000556680 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 USP17L5A8MUK1 530 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 SH3BP2P78314 561 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 ERFEQ4G0M1 354 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 PPP1R18Q6NYC8 613 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 DEPDC4Q8N2C3 294 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 FAM174AQ8TBP5 190 aa7.49□□□□□ -1.21
TRAV15-201ENST00000556680 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.49□□□□□ -1.21
TRAV15-201ENST00000556680 LZTS3O60299 673 aaPredicted RBP7.48□□□□□ -1.21
TRAV15-201ENST00000556680 MAP7D1Q3KQU3 841 aa7.48□□□□□ -1.21
TRAV15-201ENST00000556680 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms