RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 ADGRL3Q9HAR2 1447 aa10.83□□□□□ -0.68
PCNX4-210ENST00000555740 PRAM1Q96QH2 718 aa10.83□□□□□ -0.68
PCNX4-210ENST00000555740 ATP7BP35670 1465 aa10.83□□□□□ -0.68
PCNX4-210ENST00000555740 NRKQ7Z2Y5 1582 aa10.82□□□□□ -0.68
PCNX4-210ENST00000555740 KCNA6P17658 529 aa10.82□□□□□ -0.68
PCNX4-210ENST00000555740 ANKARQ7Z5J8 1434 aa10.82□□□□□ -0.68
PCNX4-210ENST00000555740 ATAD2Q6PL18 1390 aa10.82□□□□□ -0.68
PCNX4-210ENST00000555740 EVC2Q86UK5 1308 aa10.82□□□□□ -0.68
PCNX4-210ENST00000555740 ANKRD26Q9UPS8 1709 aa10.82□□□□□ -0.68
PCNX4-210ENST00000555740 DCCP43146 1447 aa10.81□□□□□ -0.68
PCNX4-210ENST00000555740 HSPA2P54652 639 aa10.81□□□□□ -0.68
PCNX4-210ENST00000555740 STK26Q9P289 416 aa10.81□□□□□ -0.68
PCNX4-210ENST00000555740 AMOTL2Q9Y2J4 779 aa10.81□□□□□ -0.68
PCNX4-210ENST00000555740 KIF1AQ12756 1690 aa10.8□□□□□ -0.68
PCNX4-210ENST00000555740 USP54Q70EL1 1684 aa10.8□□□□□ -0.68
PCNX4-210ENST00000555740 KIF20BQ96Q89 1820 aa10.79□□□□□ -0.68
PCNX4-210ENST00000555740 POGKQ9P215 609 aa10.79□□□□□ -0.68
PCNX4-210ENST00000555740 CD163L1Q9NR16 1453 aa10.79□□□□□ -0.68
PCNX4-210ENST00000555740 CADPS2Q86UW7 1296 aa10.79□□□□□ -0.68
PCNX4-210ENST00000555740 RGPD8O14715 1765 aaPredicted RBP10.78□□□□□ -0.68
PCNX4-210ENST00000555740 LRRC7Q96NW7 1537 aa10.78□□□□□ -0.68
PCNX4-210ENST00000555740 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
PCNX4-210ENST00000555740 LTBP4Q8N2S1 1624 aa10.77□□□□□ -0.68
PCNX4-210ENST00000555740 WAPLQ7Z5K2 1190 aa10.77□□□□□ -0.69
PCNX4-210ENST00000555740 ANKRD36BQ8N2N9 1353 aa10.76□□□□□ -0.69
PCNX4-210ENST00000555740 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
PCNX4-210ENST00000555740 MINK1Q8N4C8 1332 aaPredicted RBP10.76□□□□□ -0.69
PCNX4-210ENST00000555740 WASLO00401 505 aaPredicted RBP10.76□□□□□ -0.69
PCNX4-210ENST00000555740 DIEXFQ68CQ4 756 aaKnown RBP10.76□□□□□ -0.69
PCNX4-210ENST00000555740 CPSF1Q10570 1443 aaKnown RBP10.75□□□□□ -0.69
PCNX4-210ENST00000555740 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
PCNX4-210ENST00000555740 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
PCNX4-210ENST00000555740 DDX10Q13206 875 aaKnown RBP10.74□□□□□ -0.69
PCNX4-210ENST00000555740 CDK19Q9BWU1 502 aa10.74□□□□□ -0.69
PCNX4-210ENST00000555740 GTF3C3Q9Y5Q9 886 aa10.74□□□□□ -0.69
PCNX4-210ENST00000555740 PPIP5K1Q6PFW1 1433 aa10.73□□□□□ -0.69
PCNX4-210ENST00000555740 CACNB1Q02641 598 aaPredicted RBP10.73□□□□□ -0.69
PCNX4-210ENST00000555740 POLR3AO14802 1390 aaPredicted RBP10.72□□□□□ -0.69
PCNX4-210ENST00000555740 SAFB2Q14151 953 aaKnown RBP eCLIP10.72□□□□□ -0.69
PCNX4-210ENST00000555740 KCNV2Q8TDN2 545 aa10.72□□□□□ -0.69
PCNX4-210ENST00000555740 TRPM3Q9HCF6 1732 aaPredicted RBP10.72□□□□□ -0.69
PCNX4-210ENST00000555740 PRR36Q9H6K5 1346 aa10.72□□□□□ -0.69
PCNX4-210ENST00000555740 NSD2O96028 1365 aa10.72□□□□□ -0.69
PCNX4-210ENST00000555740 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
PCNX4-210ENST00000555740 IQSEC2Q5JU85 1478 aa10.72□□□□□ -0.69
PCNX4-210ENST00000555740 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
PCNX4-210ENST00000555740 PER1O15534 1290 aaPredicted RBP10.72□□□□□ -0.69
PCNX4-210ENST00000555740 A0A1W2PP64 1363 aa10.71□□□□□ -0.69
PCNX4-210ENST00000555740 MST1RQ04912 1400 aa10.71□□□□□ -0.69
PCNX4-210ENST00000555740 CABP2Q9NPB3 220 aa10.71□□□□□ -0.69
PCNX4-210ENST00000555740 BRD4O60885 1362 aaPredicted RBP10.7□□□□□ -0.7
PCNX4-210ENST00000555740 PARD3Q8TEW0 1356 aa10.7□□□□□ -0.7
PCNX4-210ENST00000555740 EDC4Q6P2E9 1401 aaKnown RBP10.7□□□□□ -0.7
PCNX4-210ENST00000555740 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
PCNX4-210ENST00000555740 SSH2Q76I76 1423 aa10.7□□□□□ -0.7
PCNX4-210ENST00000555740 NSD3Q9BZ95 1437 aa10.7□□□□□ -0.7
PCNX4-210ENST00000555740 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
PCNX4-210ENST00000555740 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
PCNX4-210ENST00000555740 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
PCNX4-210ENST00000555740 NUDT16Q96DE0 195 aaKnown RBP10.69□□□□□ -0.7
PCNX4-210ENST00000555740 ZNF335Q9H4Z2 1342 aaPredicted RBP10.69□□□□□ -0.7
PCNX4-210ENST00000555740 C1orf167Q5SNV9 1468 aa10.69□□□□□ -0.7
PCNX4-210ENST00000555740 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
PCNX4-210ENST00000555740 PANK3Q9H999 370 aa10.68□□□□□ -0.7
PCNX4-210ENST00000555740 USP6P35125 1406 aa10.68□□□□□ -0.7
PCNX4-210ENST00000555740 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
PCNX4-210ENST00000555740 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
PCNX4-210ENST00000555740 MSH6P52701 1360 aa10.68□□□□□ -0.7
PCNX4-210ENST00000555740 ALS2Q96Q42 1657 aa10.67□□□□□ -0.7
PCNX4-210ENST00000555740 POLR3GLQ9BT43 218 aa10.66□□□□□ -0.7
PCNX4-210ENST00000555740 C19orf44Q9H6X5 657 aa10.66□□□□□ -0.7
PCNX4-210ENST00000555740 TERF2IPQ9NYB0 399 aa10.66□□□□□ -0.7
PCNX4-210ENST00000555740 REM2Q8IYK8 340 aaPredicted RBP10.66□□□□□ -0.7
PCNX4-210ENST00000555740 CARD14Q9BXL6 1004 aa10.66□□□□□ -0.7
PCNX4-210ENST00000555740 SLC12A5Q9H2X9 1139 aa10.66□□□□□ -0.7
PCNX4-210ENST00000555740 CRYBG1Q9Y4K1 1723 aa10.66□□□□□ -0.7
PCNX4-210ENST00000555740 MED1Q15648 1581 aaPredicted RBP10.65□□□□□ -0.7
PCNX4-210ENST00000555740 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
PCNX4-210ENST00000555740 HDGFL2Q7Z4V5 671 aaPredicted RBP10.64□□□□□ -0.71
PCNX4-210ENST00000555740 PRKRIP1Q9H875 184 aaPredicted RBP10.64□□□□□ -0.71
PCNX4-210ENST00000555740 CGNL1Q0VF96 1302 aa10.64□□□□□ -0.71
PCNX4-210ENST00000555740 OVOS2A0A0J9YW53 1432 aa10.64□□□□□ -0.71
PCNX4-210ENST00000555740 OVOS2Q6IE36 1432 aa10.64□□□□□ -0.71
PCNX4-210ENST00000555740 ANP32CO43423 234 aa10.64□□□□□ -0.71
PCNX4-210ENST00000555740 RALBP1Q15311 655 aa10.64□□□□□ -0.71
PCNX4-210ENST00000555740 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
PCNX4-210ENST00000555740 AHDC1Q5TGY3 1603 aaPredicted RBP10.64□□□□□ -0.71
PCNX4-210ENST00000555740 PHRF1Q9P1Y6 1649 aaKnown RBP10.64□□□□□ -0.71
PCNX4-210ENST00000555740 SMG6Q86US8 1419 aaKnown RBP10.64□□□□□ -0.71
PCNX4-210ENST00000555740 CCER2I3L3R5 266 aa10.63□□□□□ -0.71
PCNX4-210ENST00000555740 TSPYL2Q9H2G4 693 aaPredicted RBP10.63□□□□□ -0.71
PCNX4-210ENST00000555740 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
PCNX4-210ENST00000555740 KNSTRNQ9Y448 316 aa10.63□□□□□ -0.71
PCNX4-210ENST00000555740 PXDNQ92626 1479 aa10.63□□□□□ -0.71
PCNX4-210ENST00000555740 PCDHB8Q9UN66 801 aa10.62□□□□□ -0.71
PCNX4-210ENST00000555740 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
PCNX4-210ENST00000555740 USP31Q70CQ4 1352 aa10.62□□□□□ -0.71
PCNX4-210ENST00000555740 CHRM1P11229 460 aaPredicted RBP10.62□□□□□ -0.71
PCNX4-210ENST00000555740 ABCA3Q99758 1704 aa10.62□□□□□ -0.71
PCNX4-210ENST00000555740 SLIT3O75094 1523 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms