RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-204ENST00000555690 NBPF1Q3BBV0 1214 aa35.46■■■■□ 3.27
PPP4R4-204ENST00000555690 ZRANB1Q9UGI0 708 aa35.44■■■■□ 3.26
PPP4R4-204ENST00000555690 BLMP54132 1417 aaPredicted RBP35.41■■■■□ 3.26
PPP4R4-204ENST00000555690 KRT27Q7Z3Y8 459 aa35.41■■■■□ 3.26
PPP4R4-204ENST00000555690 ITSN1Q15811 1721 aa35.4■■■■□ 3.26
PPP4R4-204ENST00000555690 KIAA1210Q9ULL0 1709 aa35.4■■■■□ 3.26
PPP4R4-204ENST00000555690 A0A0G2JS52 829 aa35.4■■■■□ 3.26
PPP4R4-204ENST00000555690 MYT1Q01538 1121 aa35.4■■■■□ 3.26
PPP4R4-204ENST00000555690 COL14A1Q05707 1796 aaKnown RBP35.38■■■■□ 3.25
PPP4R4-204ENST00000555690 NRAPQ86VF7 1730 aa35.38■■■■□ 3.25
PPP4R4-204ENST00000555690 FAM98CQ17RN3 349 aaKnown RBP35.38■■■■□ 3.25
PPP4R4-204ENST00000555690 PRDM11Q9NQV5 511 aa35.37■■■■□ 3.25
PPP4R4-204ENST00000555690 CCDC61Q9Y6R9 512 aa35.37■■■■□ 3.25
PPP4R4-204ENST00000555690 ACEP12821 1306 aa35.36■■■■□ 3.25
PPP4R4-204ENST00000555690 CRYBG1Q9Y4K1 1723 aa35.35■■■■□ 3.25
PPP4R4-204ENST00000555690 NBPF8Q3BBV2 869 aa35.35■■■■□ 3.25
PPP4R4-204ENST00000555690 NUTM2GQ5VZR2 741 aa35.35■■■■□ 3.25
PPP4R4-204ENST00000555690 DEFB132Q7Z7B7 95 aa35.34■■■■□ 3.25
PPP4R4-204ENST00000555690 POLR3AO14802 1390 aaPredicted RBP35.34■■■■□ 3.25
PPP4R4-204ENST00000555690 SF3B2Q13435 895 aaKnown RBP35.33■■■■□ 3.25
PPP4R4-204ENST00000555690 PLEKHG3A1L390 1219 aa35.32■■■■□ 3.24
PPP4R4-204ENST00000555690 SPATA31A5Q5VU36 1347 aa35.31■■■■□ 3.24
PPP4R4-204ENST00000555690 SPATA31A7Q8IWB4 1347 aa35.31■■■■□ 3.24
PPP4R4-204ENST00000555690 KIAA0232Q92628 1395 aa35.3■■■■□ 3.24
PPP4R4-204ENST00000555690 CHRNA2Q15822 529 aa35.29■■■■□ 3.24
PPP4R4-204ENST00000555690 TOPAZ1Q8N9V7 1692 aa35.29■■■■□ 3.24
PPP4R4-204ENST00000555690 CENPJQ9HC77 1338 aaPredicted RBP35.29■■■■□ 3.24
PPP4R4-204ENST00000555690 ZC3H6P61129 1189 aaKnown RBP35.28■■■■□ 3.24
PPP4R4-204ENST00000555690 SRPK2P78362 688 aaKnown RBP35.28■■■■□ 3.24
PPP4R4-204ENST00000555690 L3MBTL2Q969R5 705 aa35.28■■■■□ 3.24
PPP4R4-204ENST00000555690 CABP2Q9NPB3 220 aa35.25■■■■□ 3.23
PPP4R4-204ENST00000555690 ABTB2Q8N961 1025 aa35.24■■■■□ 3.23
PPP4R4-204ENST00000555690 SIN3AQ96ST3 1273 aa35.23■■■■□ 3.23
PPP4R4-204ENST00000555690 PHRF1Q9P1Y6 1649 aaKnown RBP35.22■■■■□ 3.23
PPP4R4-204ENST00000555690 STRN4Q9NRL3 753 aa35.22■■■■□ 3.23
PPP4R4-204ENST00000555690 FAM182BQ5T319 152 aa35.21■■■■□ 3.23
PPP4R4-204ENST00000555690 PPIP5K1Q6PFW1 1433 aa35.21■■■■□ 3.23
PPP4R4-204ENST00000555690 SPATA31A1Q5TZJ5 1347 aa35.19■■■■□ 3.22
PPP4R4-204ENST00000555690 NEUROD1Q13562 356 aa35.15■■■■□ 3.22
PPP4R4-204ENST00000555690 BAG6P46379 1132 aa35.14■■■■□ 3.22
PPP4R4-204ENST00000555690 QRICH2Q9H0J4 1663 aa35.14■■■■□ 3.22
PPP4R4-204ENST00000555690 THSD7AQ9UPZ6 1657 aa35.14■■■■□ 3.22
PPP4R4-204ENST00000555690 USP19O94966 1318 aa35.13■■■■□ 3.21
PPP4R4-204ENST00000555690 EVA1CP58658 441 aa35.13■■■■□ 3.21
PPP4R4-204ENST00000555690 NLRP13Q86W25 1043 aa35.13■■■■□ 3.21
PPP4R4-204ENST00000555690 CABP1Q9NZU7 370 aa35.13■■■■□ 3.21
PPP4R4-204ENST00000555690 USP35Q9P2H5 1018 aa35.12■■■■□ 3.21
PPP4R4-204ENST00000555690 NRKQ7Z2Y5 1582 aa35.11■■■■□ 3.21
PPP4R4-204ENST00000555690 GCP02774 474 aa35.09■■■■□ 3.21
PPP4R4-204ENST00000555690 CPDO75976 1380 aa35.09■■■■□ 3.21
PPP4R4-204ENST00000555690 SSH2Q76I76 1423 aa35.07■■■■□ 3.21
PPP4R4-204ENST00000555690 CAMTA1Q9Y6Y1 1673 aa35.07■■■■□ 3.2
PPP4R4-204ENST00000555690 EN1Q05925 392 aaPredicted RBP35.06■■■■□ 3.2
PPP4R4-204ENST00000555690 LARP1Q6PKG0 1096 aaKnown RBP35.06■■■■□ 3.2
PPP4R4-204ENST00000555690 BRD4O60885 1362 aaPredicted RBP35.05■■■■□ 3.2
PPP4R4-204ENST00000555690 TRPM1Q7Z4N2 1603 aa35.05■■■■□ 3.2
PPP4R4-204ENST00000555690 EVC2Q86UK5 1308 aa35.05■■■■□ 3.2
PPP4R4-204ENST00000555690 ROCK2O75116 1388 aaKnown RBP35.04■■■■□ 3.2
PPP4R4-204ENST00000555690 USP6P35125 1406 aa35.04■■■■□ 3.2
PPP4R4-204ENST00000555690 NLRP6P59044 892 aa35.02■■■■□ 3.2
PPP4R4-204ENST00000555690 BARGINQ6ZT62 677 aa35.02■■■■□ 3.2
PPP4R4-204ENST00000555690 RGPD1P0DJD0 1748 aa35.01■■■■□ 3.19
PPP4R4-204ENST00000555690 FAM196AQ6ZSG2 479 aa35■■■■□ 3.19
PPP4R4-204ENST00000555690 LMO7Q8WWI1 1683 aa35■■■■□ 3.19
PPP4R4-204ENST00000555690 ZBTB7CA1YPR0 619 aa34.99■■■■□ 3.19
PPP4R4-204ENST00000555690 TCP11L2Q8N4U5 519 aa34.99■■■■□ 3.19
PPP4R4-204ENST00000555690 PSDA5PKW4 1024 aaPredicted RBP34.98■■■■□ 3.19
PPP4R4-204ENST00000555690 TRIM37O94972 964 aa34.98■■■■□ 3.19
PPP4R4-204ENST00000555690 PDE3BQ13370 1112 aa34.96■■■■□ 3.19
PPP4R4-204ENST00000555690 DISP2A7MBM2 1401 aa34.93■■■■□ 3.18
PPP4R4-204ENST00000555690 COL5A2P05997 1499 aaPredicted RBP34.92■■■■□ 3.18
PPP4R4-204ENST00000555690 EZH2Q15910 746 aaKnown RBP34.92■■■■□ 3.18
PPP4R4-204ENST00000555690 THRAP3Q9Y2W1 955 aaKnown RBP34.92■■■■□ 3.18
PPP4R4-204ENST00000555690 TNS1Q9HBL0 1735 aaKnown RBP34.92■■■■□ 3.18
PPP4R4-204ENST00000555690 ZNF692Q9BU19 519 aaPredicted RBP34.9■■■■□ 3.18
PPP4R4-204ENST00000555690 SLIT3O75094 1523 aa34.9■■■■□ 3.18
PPP4R4-204ENST00000555690 AATKQ6ZMQ8 1374 aa34.89■■■■□ 3.18
PPP4R4-204ENST00000555690 TTC21BQ7Z4L5 1316 aa34.88■■■■□ 3.17
PPP4R4-204ENST00000555690 APBA3O96018 575 aa34.88■■■■□ 3.17
PPP4R4-204ENST00000555690 CAMKK2Q96RR4 588 aa34.88■■■■□ 3.17
PPP4R4-204ENST00000555690 PIK3C2AO00443 1686 aa34.87■■■■□ 3.17
PPP4R4-204ENST00000555690 CRB1P82279 1406 aa34.86■■■■□ 3.17
PPP4R4-204ENST00000555690 R3HDM1Q15032 1099 aaKnown RBP34.85■■■■□ 3.17
PPP4R4-204ENST00000555690 AXIN2Q9Y2T1 843 aa34.83■■■■□ 3.17
PPP4R4-204ENST00000555690 SOX12O15370 315 aa34.81■■■■□ 3.16
PPP4R4-204ENST00000555690 TOM1L2Q6ZVM7 507 aa34.81■■■■□ 3.16
PPP4R4-204ENST00000555690 CARD11Q9BXL7 1154 aa34.81■■■■□ 3.16
PPP4R4-204ENST00000555690 CPSF1Q10570 1443 aaKnown RBP34.81■■■■□ 3.16
PPP4R4-204ENST00000555690 LRP5O75197 1615 aa34.8■■■■□ 3.16
PPP4R4-204ENST00000555690 TTC21AQ8NDW8 1320 aa34.8■■■■□ 3.16
PPP4R4-204ENST00000555690 KTN1Q86UP2 1357 aaKnown RBP34.79■■■■□ 3.16
PPP4R4-204ENST00000555690 ARHGEF25Q86VW2 580 aa34.79■■■■□ 3.16
PPP4R4-204ENST00000555690 KCNH5Q8NCM2 988 aa34.79■■■■□ 3.16
PPP4R4-204ENST00000555690 AKAP12Q02952 1782 aa34.79■■■■□ 3.16
PPP4R4-204ENST00000555690 COL18A1P39060 1754 aa34.77■■■■□ 3.16
PPP4R4-204ENST00000555690 PARP4Q9UKK3 1724 aaKnown RBP34.77■■■■□ 3.16
PPP4R4-204ENST00000555690 PARD3Q8TEW0 1356 aa34.75■■■■□ 3.15
PPP4R4-204ENST00000555690 SBNO2Q9Y2G9 1366 aa34.75■■■■□ 3.15
PPP4R4-204ENST00000555690 WDR17Q8IZU2 1322 aa34.75■■■■□ 3.15
PPP4R4-204ENST00000555690 TONSLQ96HA7 1378 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms