RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 CTHP32929 405 aa8.89□□□□□ -0.99
KTN1-223ENST00000555573 HDGFL1Q5TGJ6 251 aa8.89□□□□□ -0.99
KTN1-223ENST00000555573 NUDT12Q9BQG2 462 aa8.89□□□□□ -0.99
KTN1-223ENST00000555573 IL21Q9HBE4 155 aa8.89□□□□□ -0.99
KTN1-223ENST00000555573 FKBPLQ9UIM3 349 aa8.88□□□□□ -0.99
KTN1-223ENST00000555573 PNMA1Q8ND90 353 aa8.88□□□□□ -0.99
KTN1-223ENST00000555573 EVA1BQ9NVM1 165 aa8.88□□□□□ -0.99
KTN1-223ENST00000555573 KCNH2Q12809 1159 aa8.86□□□□□ -0.99
KTN1-223ENST00000555573 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
KTN1-223ENST00000555573 ALG2Q9H553 416 aa8.86□□□□□ -0.99
KTN1-223ENST00000555573 FBXO45P0C2W1 286 aa8.85□□□□□ -0.99
KTN1-223ENST00000555573 SLC6A16Q9GZN6 736 aa8.85□□□□□ -0.99
KTN1-223ENST00000555573 ZBBXA8MT70 800 aa8.83□□□□□ -1
KTN1-223ENST00000555573 NR1H3Q13133 447 aa8.83□□□□□ -1
KTN1-223ENST00000555573 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
KTN1-223ENST00000555573 PTCRAQ6ISU1 281 aaPredicted RBP8.83□□□□□ -1
KTN1-223ENST00000555573 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
KTN1-223ENST00000555573 S1PR4O95977 384 aa8.82□□□□□ -1
KTN1-223ENST00000555573 SOX11P35716 441 aa8.82□□□□□ -1
KTN1-223ENST00000555573 EIF4G2P78344 907 aaKnown RBP eCLIP8.81□□□□□ -1
KTN1-223ENST00000555573 SEMA3FQ13275 785 aa8.81□□□□□ -1
KTN1-223ENST00000555573 ARMC2Q8NEN0 867 aa8.8□□□□□ -1
KTN1-223ENST00000555573 UCN2Q96RP3 112 aa8.8□□□□□ -1
KTN1-223ENST00000555573 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
KTN1-223ENST00000555573 OCSTAMPQ9BR26 566 aa8.8□□□□□ -1
KTN1-223ENST00000555573 NBPF14Q5TI25 921 aa8.79□□□□□ -1
KTN1-223ENST00000555573 PDXDC2PQ6P474 469 aa8.79□□□□□ -1
KTN1-223ENST00000555573 PPP1R12CQ9BZL4 782 aa8.79□□□□□ -1
KTN1-223ENST00000555573 HCSTQ9UBK5 93 aa8.79□□□□□ -1
KTN1-223ENST00000555573 FCF1Q9Y324 198 aaKnown RBP8.79□□□□□ -1
KTN1-223ENST00000555573 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
KTN1-223ENST00000555573 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
KTN1-223ENST00000555573 PTK2Q05397 1052 aa8.77□□□□□ -1
KTN1-223ENST00000555573 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1
KTN1-223ENST00000555573 PALM3A6NDB9 673 aaPredicted RBP8.77□□□□□ -1.01
KTN1-223ENST00000555573 RFX1P22670 979 aa8.77□□□□□ -1.01
KTN1-223ENST00000555573 ITGBL1O95965 494 aaPredicted RBP8.76□□□□□ -1.01
KTN1-223ENST00000555573 PPEF1O14829 653 aaPredicted RBP8.75□□□□□ -1.01
KTN1-223ENST00000555573 KCNC4Q03721 635 aa8.75□□□□□ -1.01
KTN1-223ENST00000555573 TFIP11Q9UBB9 837 aaKnown RBP8.75□□□□□ -1.01
KTN1-223ENST00000555573 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
KTN1-223ENST00000555573 SH3BP5LQ7L8J4 393 aa8.74□□□□□ -1.01
KTN1-223ENST00000555573 BAP1Q92560 729 aa8.74□□□□□ -1.01
KTN1-223ENST00000555573 ARHGAP9Q9BRR9 750 aa8.74□□□□□ -1.01
KTN1-223ENST00000555573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.74□□□□□ -1.01
KTN1-223ENST00000555573 PIK3CDO00329 1044 aa8.74□□□□□ -1.01
KTN1-223ENST00000555573 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
KTN1-223ENST00000555573 ADAM32Q8TC27 787 aa8.74□□□□□ -1.01
KTN1-223ENST00000555573 PPP1R15AO75807 674 aaPredicted RBP8.73□□□□□ -1.01
KTN1-223ENST00000555573 LMOD1P29536 600 aaPredicted RBP8.73□□□□□ -1.01
KTN1-223ENST00000555573 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
KTN1-223ENST00000555573 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
KTN1-223ENST00000555573 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
KTN1-223ENST00000555573 RNF223E7ERA6 249 aa8.71□□□□□ -1.01
KTN1-223ENST00000555573 SRPK2P78362 688 aaKnown RBP8.71□□□□□ -1.01
KTN1-223ENST00000555573 SH3RF1Q7Z6J0 888 aa8.71□□□□□ -1.01
KTN1-223ENST00000555573 ZBTB33Q86T24 672 aa8.71□□□□□ -1.01
KTN1-223ENST00000555573 ZNF511Q8NB15 262 aa8.71□□□□□ -1.01
KTN1-223ENST00000555573 FOXJ1Q92949 421 aa8.71□□□□□ -1.01
KTN1-223ENST00000555573 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.01
KTN1-223ENST00000555573 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.02
KTN1-223ENST00000555573 ATP9BO43861 1147 aa8.71□□□□□ -1.02
KTN1-223ENST00000555573 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
KTN1-223ENST00000555573 PLA2G2CQ5R387 149 aa8.7□□□□□ -1.02
KTN1-223ENST00000555573 RETREG2Q8NC44 543 aa8.7□□□□□ -1.02
KTN1-223ENST00000555573 FAM174AQ8TBP5 190 aa8.7□□□□□ -1.02
KTN1-223ENST00000555573 CEP126Q9P2H0 1117 aa8.7□□□□□ -1.02
KTN1-223ENST00000555573 AGERQ15109 404 aa8.69□□□□□ -1.02
KTN1-223ENST00000555573 PDIA4P13667 645 aaKnown RBP8.68□□□□□ -1.02
KTN1-223ENST00000555573 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
KTN1-223ENST00000555573 SH3BP2P78314 561 aa8.68□□□□□ -1.02
KTN1-223ENST00000555573 ERFEQ4G0M1 354 aa8.68□□□□□ -1.02
KTN1-223ENST00000555573 PPP1R18Q6NYC8 613 aa8.68□□□□□ -1.02
KTN1-223ENST00000555573 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
KTN1-223ENST00000555573 NFATC2IPQ8NCF5 419 aa8.68□□□□□ -1.02
KTN1-223ENST00000555573 ACIN1Q9UKV3 1341 aaKnown RBP8.68□□□□□ -1.02
KTN1-223ENST00000555573 SKIP12755 728 aa8.67□□□□□ -1.02
KTN1-223ENST00000555573 MCCD1P59942 119 aaPredicted RBP8.67□□□□□ -1.02
KTN1-223ENST00000555573 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
KTN1-223ENST00000555573 ZNF592Q92610 1267 aa8.67□□□□□ -1.02
KTN1-223ENST00000555573 ZBTB24O43167 697 aaPredicted RBP8.66□□□□□ -1.02
KTN1-223ENST00000555573 GGCXP38435 758 aa8.66□□□□□ -1.02
KTN1-223ENST00000555573 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
KTN1-223ENST00000555573 DZIP3Q86Y13 1208 aaKnown RBP8.66□□□□□ -1.02
KTN1-223ENST00000555573 PHTF2Q8N3S3 785 aa8.66□□□□□ -1.02
KTN1-223ENST00000555573 TRIM32Q13049 653 aa8.66□□□□□ -1.02
KTN1-223ENST00000555573 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
KTN1-223ENST00000555573 DEPDC4Q8N2C3 294 aa8.66□□□□□ -1.02
KTN1-223ENST00000555573 USP17L3A6NCW0 530 aa8.65□□□□□ -1.03
KTN1-223ENST00000555573 USP17L4A6NCW7 530 aa8.65□□□□□ -1.03
KTN1-223ENST00000555573 USP17L5A8MUK1 530 aa8.65□□□□□ -1.03
KTN1-223ENST00000555573 USP17L2Q6R6M4 530 aa8.65□□□□□ -1.03
KTN1-223ENST00000555573 USP17L1Q7RTZ2 530 aa8.65□□□□□ -1.03
KTN1-223ENST00000555573 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.03
KTN1-223ENST00000555573 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.65□□□□□ -1.03
KTN1-223ENST00000555573 SKOR1P84550 965 aa8.63□□□□□ -1.03
KTN1-223ENST00000555573 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
KTN1-223ENST00000555573 KANK4Q5T7N3 995 aaPredicted RBP8.63□□□□□ -1.03
KTN1-223ENST00000555573 TRAIPQ9BWF2 469 aa8.63□□□□□ -1.03
KTN1-223ENST00000555573 GIGYF1O75420 1035 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms