RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TBC1D9Q6ZT07 1266 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 TRPM2O94759 1503 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 CD109Q6YHK3 1445 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 FSD2A1L4K1 749 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 WAPLQ7Z5K2 1190 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 NGEFQ8N5V2 710 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 DTNBO60941 627 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 PLEKHF1Q96S99 279 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 EMILIN1Q9Y6C2 1016 aa21.31■■□□□ 1
PPP4R3A-208ENST00000555462 FANCAO15360 1455 aa21.3■■□□□ 1
PPP4R3A-208ENST00000555462 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
PPP4R3A-208ENST00000555462 SMC5Q8IY18 1101 aa21.3■■□□□ 1
PPP4R3A-208ENST00000555462 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
PPP4R3A-208ENST00000555462 CEP152O94986 1710 aa21.29■■□□□ 1
PPP4R3A-208ENST00000555462 A0A1W2PP64 1363 aa21.29■■□□□ 1
PPP4R3A-208ENST00000555462 IDI1Q13907 227 aa21.29■■□□□ 1
PPP4R3A-208ENST00000555462 NINLQ9Y2I6 1382 aa21.29■■□□□ 1
PPP4R3A-208ENST00000555462 MRE11P49959 708 aa21.29■■□□□ 1
PPP4R3A-208ENST00000555462 NUCB1Q02818 461 aa21.29■■□□□ 1
PPP4R3A-208ENST00000555462 RRS1Q15050 365 aaKnown RBP21.29■■□□□ 1
PPP4R3A-208ENST00000555462 DDX49Q9Y6V7 483 aaKnown RBP21.29■■□□□ 1
PPP4R3A-208ENST00000555462 CLASP1Q7Z460 1538 aa21.28■■□□□ 1
PPP4R3A-208ENST00000555462 ABCA6Q8N139 1617 aa21.28■■□□□ 1
PPP4R3A-208ENST00000555462 PLXNC1O60486 1568 aa21.28■■□□□ 1
PPP4R3A-208ENST00000555462 ESPNB1AK53 854 aa21.28■■□□□ 1
PPP4R3A-208ENST00000555462 HDAC1Q13547 482 aaPredicted RBP21.28■■□□□ 1
PPP4R3A-208ENST00000555462 TSHZ3Q63HK5 1081 aa21.28■■□□□ 1
PPP4R3A-208ENST00000555462 MCTP1Q6DN14 999 aa21.28■■□□□ 1
PPP4R3A-208ENST00000555462 IPO8O15397 1037 aaKnown RBP21.27■■□□□ 1
PPP4R3A-208ENST00000555462 ADGRL1O94910 1474 aa21.27■□□□□ 0.99
PPP4R3A-208ENST00000555462 ZNF518AQ6AHZ1 1483 aa21.27■□□□□ 0.99
PPP4R3A-208ENST00000555462 SIRT2Q8IXJ6 389 aa21.26■□□□□ 0.99
PPP4R3A-208ENST00000555462 ABCC1P33527 1531 aa21.26■□□□□ 0.99
PPP4R3A-208ENST00000555462 SLC24A1O60721 1099 aa21.26■□□□□ 0.99
PPP4R3A-208ENST00000555462 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
PPP4R3A-208ENST00000555462 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
PPP4R3A-208ENST00000555462 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
PPP4R3A-208ENST00000555462 CCDC27Q2M243 656 aa21.25■□□□□ 0.99
PPP4R3A-208ENST00000555462 KIF2CQ99661 725 aa21.25■□□□□ 0.99
PPP4R3A-208ENST00000555462 SPHKAPQ2M3C7 1700 aa21.25■□□□□ 0.99
PPP4R3A-208ENST00000555462 DDX11L8A8MPP1 907 aa21.25■□□□□ 0.99
PPP4R3A-208ENST00000555462 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
PPP4R3A-208ENST00000555462 AK9Q5TCS8 1911 aa21.24■□□□□ 0.99
PPP4R3A-208ENST00000555462 MLECQ14165 292 aa21.24■□□□□ 0.99
PPP4R3A-208ENST00000555462 RTEL1-TNFRSF6BF6WH68 1400 aa21.24■□□□□ 0.99
PPP4R3A-208ENST00000555462 CAVIN1Q6NZI2 390 aaKnown RBP21.24■□□□□ 0.99
PPP4R3A-208ENST00000555462 HSP90AA2PQ14568 343 aaPredicted RBP21.23■□□□□ 0.99
PPP4R3A-208ENST00000555462 RBM27Q9P2N5 1060 aaKnown RBP21.23■□□□□ 0.99
PPP4R3A-208ENST00000555462 RBM10P98175 930 aaKnown RBP21.23■□□□□ 0.99
PPP4R3A-208ENST00000555462 CDK19Q9BWU1 502 aa21.23■□□□□ 0.99
PPP4R3A-208ENST00000555462 CHD1O14646 1710 aa21.23■□□□□ 0.99
PPP4R3A-208ENST00000555462 GBP4Q96PP9 640 aa21.23■□□□□ 0.99
PPP4R3A-208ENST00000555462 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
PPP4R3A-208ENST00000555462 NECTIN2Q92692 538 aa21.21■□□□□ 0.99
PPP4R3A-208ENST00000555462 ZFYVE16Q7Z3T8 1539 aa21.21■□□□□ 0.99
PPP4R3A-208ENST00000555462 ZBTB7BO15156 539 aaPredicted RBP21.21■□□□□ 0.99
PPP4R3A-208ENST00000555462 VGFO15240 615 aaPredicted RBP21.21■□□□□ 0.99
PPP4R3A-208ENST00000555462 ZGPATQ8N5A5 531 aaKnown RBP21.2■□□□□ 0.98
PPP4R3A-208ENST00000555462 SLC4A10Q6U841 1118 aa21.2■□□□□ 0.98
PPP4R3A-208ENST00000555462 NME9Q86XW9 330 aa21.2■□□□□ 0.98
PPP4R3A-208ENST00000555462 MBIPQ9NS73 344 aa21.2■□□□□ 0.98
PPP4R3A-208ENST00000555462 TERF2IPQ9NYB0 399 aa21.2■□□□□ 0.98
PPP4R3A-208ENST00000555462 IQSEC2Q5JU85 1478 aa21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 K7ELQ4 463 aaPredicted RBP21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 PLEKHG5O94827 1062 aa21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 CLCN1P35523 988 aa21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 KIF16BQ96L93 1317 aa21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 RNF214Q8ND24 703 aa21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 MAP3K4Q9Y6R4 1608 aa21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 VAMP4O75379 141 aa21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 TWISTNBQ3B726 338 aaPredicted RBP21.19■□□□□ 0.98
PPP4R3A-208ENST00000555462 ATP7AQ04656 1500 aa21.18■□□□□ 0.98
PPP4R3A-208ENST00000555462 GSPT1P15170 499 aaKnown RBP21.18■□□□□ 0.98
PPP4R3A-208ENST00000555462 ANKRD36BQ8N2N9 1353 aa21.18■□□□□ 0.98
PPP4R3A-208ENST00000555462 NPATQ14207 1427 aa21.17■□□□□ 0.98
PPP4R3A-208ENST00000555462 NASPP49321 788 aaPredicted RBP21.17■□□□□ 0.98
PPP4R3A-208ENST00000555462 SHPRHQ149N8 1683 aa21.17■□□□□ 0.98
PPP4R3A-208ENST00000555462 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
PPP4R3A-208ENST00000555462 HDGFL2Q7Z4V5 671 aaPredicted RBP21.17■□□□□ 0.98
PPP4R3A-208ENST00000555462 PPIP5K1Q6PFW1 1433 aa21.16■□□□□ 0.98
PPP4R3A-208ENST00000555462 PRPF40AO75400 957 aaKnown RBP21.16■□□□□ 0.98
PPP4R3A-208ENST00000555462 NPM1P06748 294 aaKnown RBP eCLIP21.16■□□□□ 0.98
PPP4R3A-208ENST00000555462 POLKQ9UBT6 870 aa21.16■□□□□ 0.98
PPP4R3A-208ENST00000555462 RBM25P49756 843 aaKnown RBP21.16■□□□□ 0.98
PPP4R3A-208ENST00000555462 RAB3GAP1Q15042 981 aa21.16■□□□□ 0.98
PPP4R3A-208ENST00000555462 ZNF428Q96B54 188 aa21.16■□□□□ 0.98
PPP4R3A-208ENST00000555462 AEBP1Q8IUX7 1158 aa21.15■□□□□ 0.98
PPP4R3A-208ENST00000555462 AAMPQ13685 434 aa21.15■□□□□ 0.98
PPP4R3A-208ENST00000555462 MCM10Q7L590 875 aa21.15■□□□□ 0.98
PPP4R3A-208ENST00000555462 MRPL50Q8N5N7 158 aaKnown RBP21.14■□□□□ 0.98
PPP4R3A-208ENST00000555462 BAG4O95429 457 aaKnown RBP21.14■□□□□ 0.97
PPP4R3A-208ENST00000555462 BMP2KLQ5H9B9 411 aa21.14■□□□□ 0.97
PPP4R3A-208ENST00000555462 MROH2AA6NES4 1674 aa21.13■□□□□ 0.97
PPP4R3A-208ENST00000555462 F6X3S4 739 aa21.13■□□□□ 0.97
PPP4R3A-208ENST00000555462 LARP6Q9BRS8 491 aaKnown RBP21.12■□□□□ 0.97
PPP4R3A-208ENST00000555462 GOLGA6L22H0YM25 854 aa21.11■□□□□ 0.97
PPP4R3A-208ENST00000555462 KIAA1211Q6ZU35 1233 aa21.1■□□□□ 0.97
PPP4R3A-208ENST00000555462 GDPD2Q9HCC8 539 aa21.1■□□□□ 0.97
PPP4R3A-208ENST00000555462 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
PPP4R3A-208ENST00000555462 CDC45O75419 566 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms