RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 DHX8Q14562 1220 aaKnown RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 UBTFL1P0CB47 393 aaPredicted RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 INTS3Q68E01 1043 aaKnown RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 MSH6P52701 1360 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 SYTL4Q96C24 671 aaPredicted RBP10.19□□□□□ -0.78
LINC00641-201ENST00000555379 TOM1O60784 492 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 MCM2P49736 904 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 A0A087WZG4 1122 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 H3BQV1 296 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 CABP4P57796 275 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 ARID3AQ99856 593 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 UHRF1BP1LA0JNW5 1464 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 TTC21AQ8NDW8 1320 aa10.19□□□□□ -0.78
LINC00641-201ENST00000555379 FCHSD2O94868 740 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 STARD3NLO95772 234 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 TOM1L2Q6ZVM7 507 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 DRC7Q8IY82 874 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 IPO9Q96P70 1041 aaKnown RBP10.18□□□□□ -0.78
LINC00641-201ENST00000555379 SRCIN1Q9C0H9 1055 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 GSE1Q14687 1217 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 CDK13Q14004 1512 aaKnown RBP10.18□□□□□ -0.78
LINC00641-201ENST00000555379 KDM5BQ9UGL1 1544 aa10.18□□□□□ -0.78
LINC00641-201ENST00000555379 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
LINC00641-201ENST00000555379 ASXL2Q76L83 1435 aa10.17□□□□□ -0.78
LINC00641-201ENST00000555379 A2MP01023 1474 aa10.17□□□□□ -0.78
LINC00641-201ENST00000555379 CPLX1O14810 134 aa10.17□□□□□ -0.78
LINC00641-201ENST00000555379 DHX16O60231 1041 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 RALYLQ86SE5 291 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 CLASRPQ8N2M8 674 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
LINC00641-201ENST00000555379 CFAP70Q5T0N1 1121 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 CCDC146Q8IYE0 955 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 CCDC43Q96MW1 224 aaKnown RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 ZNF287Q9HBT7 754 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 CNTROBQ8N137 903 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 GCC1Q96CN9 775 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 EIF2S2P20042 333 aaKnown RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 ABCC2Q92887 1545 aa10.16□□□□□ -0.78
LINC00641-201ENST00000555379 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
LINC00641-201ENST00000555379 FAM161AQ3B820 660 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 NACAP1Q9BZK3 213 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 NEO1Q92859 1461 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.78
LINC00641-201ENST00000555379 APBB1O00213 710 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 RAPGEF3O95398 923 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 CCDC158Q5M9N0 1113 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 ABCC5O15440 1437 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
LINC00641-201ENST00000555379 PIP4K2AP48426 406 aaPredicted RBP10.15□□□□□ -0.79
LINC00641-201ENST00000555379 STK11IPQ8N1F8 1099 aa10.15□□□□□ -0.79
LINC00641-201ENST00000555379 FAM43AQ8N2R8 423 aa10.15□□□□□ -0.79
LINC00641-201ENST00000555379 TSPYL1Q9H0U9 437 aa10.15□□□□□ -0.79
LINC00641-201ENST00000555379 APAF1O14727 1248 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 NEFHP12036 1026 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 VPS53Q5VIR6 699 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 ZNF530Q6P9A1 599 aaPredicted RBP10.14□□□□□ -0.79
LINC00641-201ENST00000555379 DNAI2Q9GZS0 605 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 NAIPQ13075 1403 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
LINC00641-201ENST00000555379 PHF8Q9UPP1 1060 aa10.14□□□□□ -0.79
LINC00641-201ENST00000555379 PLCB2Q00722 1185 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 CCDC70Q6NSX1 233 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TMOD2Q9NZR1 351 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TEX35Q5T0J7 233 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 ANKRD45Q5TZF3 282 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 NPHP3Q7Z494 1330 aa10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TULP1O00294 542 aaPredicted RBP10.13□□□□□ -0.79
LINC00641-201ENST00000555379 TPD52L1Q16890 204 aaPredicted RBP10.13□□□□□ -0.79
LINC00641-201ENST00000555379 NUDT16Q96DE0 195 aaKnown RBP10.13□□□□□ -0.79
LINC00641-201ENST00000555379 PDCP20941 246 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 SOS1Q07889 1333 aaPredicted RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 B4GALNT3Q6L9W6 998 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 NUCB2P80303 420 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 GGNBP2Q9H3C7 697 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 ANKRD36BQ8N2N9 1353 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 GNAI2P04899 355 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 SMARCC1Q92922 1105 aaPredicted RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 MTHFSP49914 203 aa10.12□□□□□ -0.79
LINC00641-201ENST00000555379 R3HCC1Q9Y3T6 440 aaKnown RBP10.12□□□□□ -0.79
LINC00641-201ENST00000555379 TRPM2O94759 1503 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 RDXP35241 583 aaKnown RBP10.11□□□□□ -0.79
LINC00641-201ENST00000555379 RILPL2Q969X0 211 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 CTNNA3Q9UI47 895 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
LINC00641-201ENST00000555379 CWC15Q9P013 229 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms