RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 GTF3C3Q9Y5Q9 886 aa32.15■■■□□ 2.74
RCCD1-203ENST00000555155 ZBED9Q6R2W3 1325 aa32.15■■■□□ 2.74
RCCD1-203ENST00000555155 ACEP12821 1306 aa32.14■■■□□ 2.74
RCCD1-203ENST00000555155 EDC4Q6P2E9 1401 aaKnown RBP32.13■■■□□ 2.73
RCCD1-203ENST00000555155 CADPS2Q86UW7 1296 aa32.13■■■□□ 2.73
RCCD1-203ENST00000555155 MST1RQ04912 1400 aa32.12■■■□□ 2.73
RCCD1-203ENST00000555155 WDR43Q15061 677 aaKnown RBP eCLIP32.12■■■□□ 2.73
RCCD1-203ENST00000555155 ESCO1Q5FWF5 840 aa32.12■■■□□ 2.73
RCCD1-203ENST00000555155 ORAI2Q96SN7 254 aa32.12■■■□□ 2.73
RCCD1-203ENST00000555155 C1orf167Q5SNV9 1468 aa32.11■■■□□ 2.73
RCCD1-203ENST00000555155 ADAMTS8Q9UP79 889 aa32.11■■■□□ 2.73
RCCD1-203ENST00000555155 MTHFSP49914 203 aa32.09■■■□□ 2.73
RCCD1-203ENST00000555155 NME9Q86XW9 330 aa32.09■■■□□ 2.73
RCCD1-203ENST00000555155 PHF8Q9UPP1 1060 aa32.09■■■□□ 2.73
RCCD1-203ENST00000555155 NGDNQ8NEJ9 315 aaKnown RBP32.08■■■□□ 2.73
RCCD1-203ENST00000555155 POLR3AO14802 1390 aaPredicted RBP32.08■■■□□ 2.73
RCCD1-203ENST00000555155 ZRANB1Q9UGI0 708 aa32.07■■■□□ 2.72
RCCD1-203ENST00000555155 BLMP54132 1417 aaPredicted RBP32.06■■■□□ 2.72
RCCD1-203ENST00000555155 ZNF692Q9BU19 519 aaPredicted RBP32.06■■■□□ 2.72
RCCD1-203ENST00000555155 SALL2Q9Y467 1007 aaPredicted RBP32.06■■■□□ 2.72
RCCD1-203ENST00000555155 NRKQ7Z2Y5 1582 aa32.04■■■□□ 2.72
RCCD1-203ENST00000555155 USP6P35125 1406 aa32.02■■■□□ 2.72
RCCD1-203ENST00000555155 SHPRHQ149N8 1683 aa32.02■■■□□ 2.72
RCCD1-203ENST00000555155 FBLN1P23142 703 aa32.01■■■□□ 2.71
RCCD1-203ENST00000555155 SLAIN2Q9P270 581 aa31.99■■■□□ 2.71
RCCD1-203ENST00000555155 TTC21BQ7Z4L5 1316 aa31.98■■■□□ 2.71
RCCD1-203ENST00000555155 FOXO3O43524 673 aa31.98■■■□□ 2.71
RCCD1-203ENST00000555155 CCDC146Q8IYE0 955 aa31.97■■■□□ 2.71
RCCD1-203ENST00000555155 CFAP53Q96M91 514 aa31.97■■■□□ 2.71
RCCD1-203ENST00000555155 INSRP06213 1382 aa31.96■■■□□ 2.71
RCCD1-203ENST00000555155 SSH2Q76I76 1423 aa31.96■■■□□ 2.71
RCCD1-203ENST00000555155 COG3Q96JB2 828 aa31.94■■■□□ 2.7
RCCD1-203ENST00000555155 XPCQ01831 940 aaPredicted RBP31.93■■■□□ 2.7
RCCD1-203ENST00000555155 BRINP3Q76B58 766 aa31.93■■■□□ 2.7
RCCD1-203ENST00000555155 KIF1AQ12756 1690 aa31.92■■■□□ 2.7
RCCD1-203ENST00000555155 PSME1Q06323 249 aa31.92■■■□□ 2.7
RCCD1-203ENST00000555155 DDX17Q92841 729 aaKnown RBP31.92■■■□□ 2.7
RCCD1-203ENST00000555155 MAP2P11137 1827 aaKnown RBP31.92■■■□□ 2.7
RCCD1-203ENST00000555155 PPM1GO15355 546 aaPredicted RBP31.9■■■□□ 2.7
RCCD1-203ENST00000555155 POLKQ9UBT6 870 aa31.87■■■□□ 2.69
RCCD1-203ENST00000555155 COL3A1P02461 1466 aaPredicted RBP31.87■■■□□ 2.69
RCCD1-203ENST00000555155 PAK3O75914 559 aaPredicted RBP31.86■■■□□ 2.69
RCCD1-203ENST00000555155 EMILIN1Q9Y6C2 1016 aa31.85■■■□□ 2.69
RCCD1-203ENST00000555155 TTC21AQ8NDW8 1320 aa31.85■■■□□ 2.69
RCCD1-203ENST00000555155 KRT28Q7Z3Y7 464 aa31.84■■■□□ 2.69
RCCD1-203ENST00000555155 OVOS2A0A0J9YW53 1432 aa31.83■■■□□ 2.69
RCCD1-203ENST00000555155 OVOS2Q6IE36 1432 aa31.83■■■□□ 2.69
RCCD1-203ENST00000555155 RRS1Q15050 365 aaKnown RBP31.83■■■□□ 2.69
RCCD1-203ENST00000555155 PIK3C2AO00443 1686 aa31.82■■■□□ 2.68
RCCD1-203ENST00000555155 NPHP3Q7Z494 1330 aa31.81■■■□□ 2.68
RCCD1-203ENST00000555155 SOX12O15370 315 aa31.81■■■□□ 2.68
RCCD1-203ENST00000555155 U2SURPO15042 1029 aaKnown RBP31.8■■■□□ 2.68
RCCD1-203ENST00000555155 U2AF1L5P0DN76 240 aaPredicted RBP31.8■■■□□ 2.68
RCCD1-203ENST00000555155 U2AF1Q01081 240 aaKnown RBP eCLIP31.8■■■□□ 2.684e-12■■□□□ 12.7
RCCD1-203ENST00000555155 APAF1O14727 1248 aa31.8■■■□□ 2.68
RCCD1-203ENST00000555155 NUTM2GQ5VZR2 741 aa31.79■■■□□ 2.68
RCCD1-203ENST00000555155 SMG6Q86US8 1419 aaKnown RBP31.79■■■□□ 2.68
RCCD1-203ENST00000555155 ABTB2Q8N961 1025 aa31.79■■■□□ 2.68
RCCD1-203ENST00000555155 AATKQ6ZMQ8 1374 aa31.79■■■□□ 2.68
RCCD1-203ENST00000555155 NUDCQ9Y266 331 aa31.78■■■□□ 2.68
RCCD1-203ENST00000555155 SUPT16HQ9Y5B9 1047 aaKnown RBP31.78■■■□□ 2.68
RCCD1-203ENST00000555155 TRPM3Q9HCF6 1732 aaPredicted RBP31.77■■■□□ 2.68
RCCD1-203ENST00000555155 PNPLA6Q8IY17 1366 aa31.77■■■□□ 2.68
RCCD1-203ENST00000555155 CERKQ8TCT0 537 aa31.77■■■□□ 2.68
RCCD1-203ENST00000555155 PXDNQ92626 1479 aa31.76■■■□□ 2.68
RCCD1-203ENST00000555155 DIAPH1O60610 1272 aaKnown RBP31.76■■■□□ 2.68
RCCD1-203ENST00000555155 CDCA7LQ96GN5 454 aa31.76■■■□□ 2.67
RCCD1-203ENST00000555155 NLRP6P59044 892 aa31.75■■■□□ 2.67
RCCD1-203ENST00000555155 TOM1O60784 492 aa31.74■■■□□ 2.67
RCCD1-203ENST00000555155 USP31Q70CQ4 1352 aa31.74■■■□□ 2.67
RCCD1-203ENST00000555155 ROBO1Q9Y6N7 1651 aa31.73■■■□□ 2.67
RCCD1-203ENST00000555155 CDK12Q9NYV4 1490 aaPredicted RBP31.72■■■□□ 2.67
RCCD1-203ENST00000555155 IQSEC2Q5JU85 1478 aa31.72■■■□□ 2.67
RCCD1-203ENST00000555155 LMOD2Q6P5Q4 547 aa31.72■■■□□ 2.67
RCCD1-203ENST00000555155 RUNDC1Q96C34 613 aa31.72■■■□□ 2.67
RCCD1-203ENST00000555155 UBAP1LF5GYI3 381 aa31.71■■■□□ 2.67
RCCD1-203ENST00000555155 MARF1Q9Y4F3 1742 aaKnown RBP31.7■■■□□ 2.67
RCCD1-203ENST00000555155 SOS2Q07890 1332 aaPredicted RBP31.7■■■□□ 2.66
RCCD1-203ENST00000555155 PIP4K2BP78356 416 aa31.69■■■□□ 2.66
RCCD1-203ENST00000555155 SBNO1A3KN83 1393 aa31.69■■■□□ 2.66
RCCD1-203ENST00000555155 RRP7AQ9Y3A4 280 aaKnown RBP31.69■■■□□ 2.66
RCCD1-203ENST00000555155 NHSL1Q5SYE7 1610 aa31.69■■■□□ 2.66
RCCD1-203ENST00000555155 PDE3BQ13370 1112 aa31.68■■■□□ 2.66
RCCD1-203ENST00000555155 PEAK1Q9H792 1746 aa31.67■■■□□ 2.66
RCCD1-203ENST00000555155 NEUROD2Q15784 382 aa31.67■■■□□ 2.66
RCCD1-203ENST00000555155 ALS2Q96Q42 1657 aa31.66■■■□□ 2.66
RCCD1-203ENST00000555155 SPATA31A3Q5VYP0 1347 aa31.66■■■□□ 2.66
RCCD1-203ENST00000555155 FKBP8Q14318 412 aa31.65■■■□□ 2.66
RCCD1-203ENST00000555155 TCP11L2Q8N4U5 519 aa31.65■■■□□ 2.66
RCCD1-203ENST00000555155 TNS3Q68CZ2 1445 aa31.65■■■□□ 2.66
RCCD1-203ENST00000555155 PLEKHG5O94827 1062 aa31.65■■■□□ 2.66
RCCD1-203ENST00000555155 ZNF521Q96K83 1311 aa31.64■■■□□ 2.66
RCCD1-203ENST00000555155 USP54Q70EL1 1684 aa31.64■■■□□ 2.66
RCCD1-203ENST00000555155 NEFLP07196 543 aa31.63■■■□□ 2.65
RCCD1-203ENST00000555155 IL13P35225 146 aa31.63■■■□□ 2.65
RCCD1-203ENST00000555155 MAP3K19Q56UN5 1328 aa31.61■■■□□ 2.65
RCCD1-203ENST00000555155 IRX6P78412 446 aaPredicted RBP31.6■■■□□ 2.65
RCCD1-203ENST00000555155 PLEKHF1Q96S99 279 aa31.6■■■□□ 2.65
RCCD1-203ENST00000555155 HMOX1P09601 288 aa31.59■■■□□ 2.65
RCCD1-203ENST00000555155 AHDC1Q5TGY3 1603 aaPredicted RBP31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms