RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, humanhuman

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-204ENST00000555088 CPSF1Q10570 1443 aaKnown RBP17.37■□□□□ 0.37
GSKIP-204ENST00000555088 HDGFL2Q7Z4V5 671 aaPredicted RBP17.36■□□□□ 0.37
GSKIP-204ENST00000555088 NGDNQ8NEJ9 315 aaKnown RBP17.36■□□□□ 0.37
GSKIP-204ENST00000555088 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
GSKIP-204ENST00000555088 ANKRD36BQ8N2N9 1353 aa17.36■□□□□ 0.37
GSKIP-204ENST00000555088 POLR3GLQ9BT43 218 aa17.35■□□□□ 0.37
GSKIP-204ENST00000555088 ACEP12821 1306 aa17.35■□□□□ 0.37
GSKIP-204ENST00000555088 TOPAZ1Q8N9V7 1692 aa17.35■□□□□ 0.37
GSKIP-204ENST00000555088 KIF1AQ12756 1690 aa17.33■□□□□ 0.37
GSKIP-204ENST00000555088 CD163L1Q9NR16 1453 aa17.33■□□□□ 0.37
GSKIP-204ENST00000555088 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.36
GSKIP-204ENST00000555088 PSME1Q06323 249 aa17.32■□□□□ 0.36
GSKIP-204ENST00000555088 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
GSKIP-204ENST00000555088 ITSN1Q15811 1721 aa17.31■□□□□ 0.36
GSKIP-204ENST00000555088 FOXO3O43524 673 aa17.31■□□□□ 0.36
GSKIP-204ENST00000555088 USP6P35125 1406 aa17.3■□□□□ 0.36
GSKIP-204ENST00000555088 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
GSKIP-204ENST00000555088 SBNO1A3KN83 1393 aa17.3■□□□□ 0.36
GSKIP-204ENST00000555088 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
GSKIP-204ENST00000555088 SOS2Q07890 1332 aaPredicted RBP17.3■□□□□ 0.36
GSKIP-204ENST00000555088 PIP4K2BP78356 416 aa17.3■□□□□ 0.36
GSKIP-204ENST00000555088 PANK3Q9H999 370 aa17.3■□□□□ 0.36
GSKIP-204ENST00000555088 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
GSKIP-204ENST00000555088 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
GSKIP-204ENST00000555088 TTC21AQ8NDW8 1320 aa17.28■□□□□ 0.36
GSKIP-204ENST00000555088 AHDC1Q5TGY3 1603 aaPredicted RBP17.28■□□□□ 0.36
GSKIP-204ENST00000555088 PXDNQ92626 1479 aa17.27■□□□□ 0.36
GSKIP-204ENST00000555088 CARD14Q9BXL6 1004 aa17.27■□□□□ 0.36
GSKIP-204ENST00000555088 FBXO41Q8TF61 875 aa17.26■□□□□ 0.35
GSKIP-204ENST00000555088 MYOM1P52179 1685 aa17.26■□□□□ 0.35
GSKIP-204ENST00000555088 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
GSKIP-204ENST00000555088 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
GSKIP-204ENST00000555088 PER1O15534 1290 aaPredicted RBP17.25■□□□□ 0.35
GSKIP-204ENST00000555088 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
GSKIP-204ENST00000555088 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
GSKIP-204ENST00000555088 KNSTRNQ9Y448 316 aa17.24■□□□□ 0.35
GSKIP-204ENST00000555088 ARHGEF10O15013 1369 aa17.24■□□□□ 0.35
GSKIP-204ENST00000555088 NPC1L1Q9UHC9 1359 aa17.24■□□□□ 0.35
GSKIP-204ENST00000555088 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
GSKIP-204ENST00000555088 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
GSKIP-204ENST00000555088 NSD3Q9BZ95 1437 aa17.23■□□□□ 0.35
GSKIP-204ENST00000555088 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
GSKIP-204ENST00000555088 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
GSKIP-204ENST00000555088 DDX17Q92841 729 aaKnown RBP17.22■□□□□ 0.35
GSKIP-204ENST00000555088 NSD2O96028 1365 aa17.22■□□□□ 0.35
GSKIP-204ENST00000555088 USP31Q70CQ4 1352 aa17.21■□□□□ 0.35
GSKIP-204ENST00000555088 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
GSKIP-204ENST00000555088 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
GSKIP-204ENST00000555088 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
GSKIP-204ENST00000555088 PIP4P2Q8N4L2 257 aa17.2■□□□□ 0.34
GSKIP-204ENST00000555088 FYB1O15117 783 aa17.19■□□□□ 0.34
GSKIP-204ENST00000555088 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
GSKIP-204ENST00000555088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
GSKIP-204ENST00000555088 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
GSKIP-204ENST00000555088 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
GSKIP-204ENST00000555088 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
GSKIP-204ENST00000555088 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
GSKIP-204ENST00000555088 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
GSKIP-204ENST00000555088 AKAP12Q02952 1782 aa17.16■□□□□ 0.34
GSKIP-204ENST00000555088 HSPA1LP34931 641 aa17.16■□□□□ 0.34
GSKIP-204ENST00000555088 NME9Q86XW9 330 aa17.16■□□□□ 0.34
GSKIP-204ENST00000555088 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
GSKIP-204ENST00000555088 USP19O94966 1318 aa17.16■□□□□ 0.34
GSKIP-204ENST00000555088 JCADQ9P266 1359 aa17.15■□□□□ 0.34
GSKIP-204ENST00000555088 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
GSKIP-204ENST00000555088 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
GSKIP-204ENST00000555088 NLRP6P59044 892 aa17.15■□□□□ 0.34
GSKIP-204ENST00000555088 SPDYE2Q495Y8 402 aa17.15■□□□□ 0.34
GSKIP-204ENST00000555088 COG3Q96JB2 828 aa17.15■□□□□ 0.34
GSKIP-204ENST00000555088 TRPM3Q9HCF6 1732 aaPredicted RBP17.15■□□□□ 0.34
GSKIP-204ENST00000555088 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
GSKIP-204ENST00000555088 OVOS2A0A0J9YW53 1432 aa17.14■□□□□ 0.33
GSKIP-204ENST00000555088 OVOS2Q6IE36 1432 aa17.14■□□□□ 0.33
GSKIP-204ENST00000555088 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
GSKIP-204ENST00000555088 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
GSKIP-204ENST00000555088 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
GSKIP-204ENST00000555088 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
GSKIP-204ENST00000555088 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
GSKIP-204ENST00000555088 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
GSKIP-204ENST00000555088 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
GSKIP-204ENST00000555088 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
GSKIP-204ENST00000555088 RALBP1Q15311 655 aa17.09■□□□□ 0.33
GSKIP-204ENST00000555088 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
GSKIP-204ENST00000555088 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
GSKIP-204ENST00000555088 SLIT3O75094 1523 aa17.09■□□□□ 0.33
GSKIP-204ENST00000555088 PIK3C2AO00443 1686 aa17.09■□□□□ 0.33
GSKIP-204ENST00000555088 GCP02774 474 aa17.08■□□□□ 0.32
GSKIP-204ENST00000555088 MKRN4PQ13434 485 aaPredicted RBP17.08■□□□□ 0.32
GSKIP-204ENST00000555088 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
GSKIP-204ENST00000555088 NUTM2GQ5VZR2 741 aa17.08■□□□□ 0.32
GSKIP-204ENST00000555088 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
GSKIP-204ENST00000555088 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
GSKIP-204ENST00000555088 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
GSKIP-204ENST00000555088 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
GSKIP-204ENST00000555088 CPDO75976 1380 aa17.06■□□□□ 0.32
GSKIP-204ENST00000555088 KIF24Q5T7B8 1368 aa17.05■□□□□ 0.32
GSKIP-204ENST00000555088 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
GSKIP-204ENST00000555088 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
GSKIP-204ENST00000555088 ANP32CO43423 234 aa17.03■□□□□ 0.32
GSKIP-204ENST00000555088 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms