RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ATF3P18847 181 aa21.13■□□□□ 0.97
PCNX1-209ENST00000554879 WWC1Q8IX03 1113 aa21.13■□□□□ 0.97
PCNX1-209ENST00000554879 MROH1Q8NDA8 1641 aa21.12■□□□□ 0.97
PCNX1-209ENST00000554879 BCAR3O75815 825 aa21.12■□□□□ 0.97
PCNX1-209ENST00000554879 CSB-PGBD3P0DP91 1061 aa21.12■□□□□ 0.97
PCNX1-209ENST00000554879 COG6Q9Y2V7 657 aa21.12■□□□□ 0.97
PCNX1-209ENST00000554879 VWDEQ8N2E2 1590 aa21.12■□□□□ 0.97
PCNX1-209ENST00000554879 DEPDC5O75140 1603 aa21.12■□□□□ 0.97
PCNX1-209ENST00000554879 SULT6B1Q6IMI4 303 aa21.11■□□□□ 0.97
PCNX1-209ENST00000554879 SBNO2Q9Y2G9 1366 aa21.11■□□□□ 0.97
PCNX1-209ENST00000554879 NGEFQ8N5V2 710 aa21.1■□□□□ 0.97
PCNX1-209ENST00000554879 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
PCNX1-209ENST00000554879 PUS7Q96PZ0 661 aaKnown RBP21.1■□□□□ 0.97
PCNX1-209ENST00000554879 A2ML1A8K2U0 1454 aa21.1■□□□□ 0.97
PCNX1-209ENST00000554879 HSPA2P54652 639 aa21.09■□□□□ 0.97
PCNX1-209ENST00000554879 ITPRIPQ8IWB1 547 aa21.09■□□□□ 0.97
PCNX1-209ENST00000554879 HSP90AA1P07900 732 aaKnown RBP21.09■□□□□ 0.97
PCNX1-209ENST00000554879 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
PCNX1-209ENST00000554879 FOXO3O43524 673 aa21.09■□□□□ 0.97
PCNX1-209ENST00000554879 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
PCNX1-209ENST00000554879 NINLQ9Y2I6 1382 aa21.08■□□□□ 0.97
PCNX1-209ENST00000554879 SLFN5Q08AF3 891 aa21.08■□□□□ 0.97
PCNX1-209ENST00000554879 THUMPD2Q9BTF0 503 aaKnown RBP21.08■□□□□ 0.97
PCNX1-209ENST00000554879 ABCC11Q96J66 1382 aa21.07■□□□□ 0.96
PCNX1-209ENST00000554879 CLTCQ00610 1675 aaKnown RBP21.07■□□□□ 0.96
PCNX1-209ENST00000554879 KDM5AP29375 1690 aaKnown RBP21.06■□□□□ 0.96
PCNX1-209ENST00000554879 LMOD3Q0VAK6 560 aa21.06■□□□□ 0.96
PCNX1-209ENST00000554879 PANK1Q8TE04 598 aa21.06■□□□□ 0.96
PCNX1-209ENST00000554879 TMPOP42166 694 aaKnown RBP21.06■□□□□ 0.96
PCNX1-209ENST00000554879 EXOSC9Q06265 439 aaKnown RBP21.05■□□□□ 0.96
PCNX1-209ENST00000554879 NSD2O96028 1365 aa21.05■□□□□ 0.96
PCNX1-209ENST00000554879 RICTORQ6R327 1708 aa21.05■□□□□ 0.96
PCNX1-209ENST00000554879 PHF8Q9UPP1 1060 aa21.04■□□□□ 0.96
PCNX1-209ENST00000554879 POLKQ9UBT6 870 aa21.04■□□□□ 0.96
PCNX1-209ENST00000554879 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
PCNX1-209ENST00000554879 ARID3AQ99856 593 aa21.03■□□□□ 0.96
PCNX1-209ENST00000554879 TTC21BQ7Z4L5 1316 aa21.03■□□□□ 0.96
PCNX1-209ENST00000554879 SYNMO15061 1565 aa21.02■□□□□ 0.96
PCNX1-209ENST00000554879 MS4A1P11836 297 aa21.02■□□□□ 0.96
PCNX1-209ENST00000554879 NPC1L1Q9UHC9 1359 aa21.02■□□□□ 0.96
PCNX1-209ENST00000554879 IPO8O15397 1037 aaKnown RBP21.02■□□□□ 0.96
PCNX1-209ENST00000554879 C20orf194Q5TEA3 1177 aa21.02■□□□□ 0.96
PCNX1-209ENST00000554879 FCHSD2O94868 740 aa21.01■□□□□ 0.95
PCNX1-209ENST00000554879 GSE1Q14687 1217 aa21.01■□□□□ 0.95
PCNX1-209ENST00000554879 POLR3AO14802 1390 aaPredicted RBP21■□□□□ 0.95
PCNX1-209ENST00000554879 DCTN1Q14203 1278 aa21■□□□□ 0.95
PCNX1-209ENST00000554879 ZFYVE9O95405 1425 aa21■□□□□ 0.95
PCNX1-209ENST00000554879 ROBO2Q9HCK4 1378 aa21■□□□□ 0.95
PCNX1-209ENST00000554879 MROH2AA6NES4 1674 aa20.99■□□□□ 0.95
PCNX1-209ENST00000554879 SPINK5Q9NQ38 1064 aaPredicted RBP20.99■□□□□ 0.95
PCNX1-209ENST00000554879 HSP90AB2PQ58FF8 381 aa20.99■□□□□ 0.95
PCNX1-209ENST00000554879 ZKSCAN2Q63HK3 967 aa20.98■□□□□ 0.95
PCNX1-209ENST00000554879 NECTIN2Q92692 538 aa20.98■□□□□ 0.95
PCNX1-209ENST00000554879 AGLP35573 1532 aa20.98■□□□□ 0.95
PCNX1-209ENST00000554879 ZMYM4Q5VZL5 1548 aa20.98■□□□□ 0.95
PCNX1-209ENST00000554879 WDR63Q8IWG1 891 aa20.98■□□□□ 0.95
PCNX1-209ENST00000554879 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
PCNX1-209ENST00000554879 ARHGEF40Q8TER5 1519 aa20.96■□□□□ 0.95
PCNX1-209ENST00000554879 PIK3C2BO00750 1634 aa20.96■□□□□ 0.95
PCNX1-209ENST00000554879 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
PCNX1-209ENST00000554879 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
PCNX1-209ENST00000554879 SLC4A3P48751 1232 aa20.95■□□□□ 0.94
PCNX1-209ENST00000554879 ZC3H6P61129 1189 aaKnown RBP20.95■□□□□ 0.94
PCNX1-209ENST00000554879 GNAI1P63096 354 aa20.95■□□□□ 0.94
PCNX1-209ENST00000554879 SLC4A10Q6U841 1118 aa20.94■□□□□ 0.94
PCNX1-209ENST00000554879 USHBP1Q8N6Y0 703 aa20.94■□□□□ 0.94
PCNX1-209ENST00000554879 PLEKHG1Q9ULL1 1385 aa20.93■□□□□ 0.94
PCNX1-209ENST00000554879 NFE2L2Q16236 605 aa20.93■□□□□ 0.94
PCNX1-209ENST00000554879 PREX1Q8TCU6 1659 aa20.93■□□□□ 0.94
PCNX1-209ENST00000554879 AEBP1Q8IUX7 1158 aa20.92■□□□□ 0.94
PCNX1-209ENST00000554879 PRR36Q9H6K5 1346 aa20.92■□□□□ 0.94
PCNX1-209ENST00000554879 APBB1O00213 710 aa20.92■□□□□ 0.94
PCNX1-209ENST00000554879 DZIP1LQ8IYY4 767 aaKnown RBP20.92■□□□□ 0.94
PCNX1-209ENST00000554879 NLRP2Q9NX02 1062 aa20.92■□□□□ 0.94
PCNX1-209ENST00000554879 FAM83GA6ND36 823 aa20.91■□□□□ 0.94
PCNX1-209ENST00000554879 MCM10Q7L590 875 aa20.91■□□□□ 0.94
PCNX1-209ENST00000554879 TSPYL4Q9UJ04 414 aa20.9■□□□□ 0.94
PCNX1-209ENST00000554879 NLRP1Q9C000 1473 aa20.9■□□□□ 0.94
PCNX1-209ENST00000554879 LAMC1P11047 1609 aa20.9■□□□□ 0.94
PCNX1-209ENST00000554879 STK31Q9BXU1 1019 aa20.9■□□□□ 0.94
PCNX1-209ENST00000554879 MIS18AQ9NYP9 233 aa20.9■□□□□ 0.94
PCNX1-209ENST00000554879 PHACTR3Q96KR7 559 aa20.89■□□□□ 0.94
PCNX1-209ENST00000554879 NRXN1Q9ULB1 1477 aa20.89■□□□□ 0.93
PCNX1-209ENST00000554879 ZC3H13Q5T200 1668 aaKnown RBP20.89■□□□□ 0.93
PCNX1-209ENST00000554879 UPF2Q9HAU5 1272 aaKnown RBP20.88■□□□□ 0.93
PCNX1-209ENST00000554879 ORAI2Q96SN7 254 aa20.88■□□□□ 0.93
PCNX1-209ENST00000554879 TEFQ10587 303 aa20.88■□□□□ 0.93
PCNX1-209ENST00000554879 SKAP1Q86WV1 359 aa20.88■□□□□ 0.93
PCNX1-209ENST00000554879 RWDD1Q9H446 243 aaPredicted RBP20.88■□□□□ 0.93
PCNX1-209ENST00000554879 SETBP1Q9Y6X0 1596 aa20.87■□□□□ 0.93
PCNX1-209ENST00000554879 QRICH2Q9H0J4 1663 aa20.86■□□□□ 0.93
PCNX1-209ENST00000554879 EIF4A2Q14240 407 aaKnown RBP20.86■□□□□ 0.93
PCNX1-209ENST00000554879 C1orf141Q5JVX7 400 aa20.86■□□□□ 0.93
PCNX1-209ENST00000554879 SIRT1Q96EB6 747 aa20.86■□□□□ 0.93
PCNX1-209ENST00000554879 IQGAP1P46940 1657 aa20.86■□□□□ 0.93
PCNX1-209ENST00000554879 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
PCNX1-209ENST00000554879 EDC4Q6P2E9 1401 aaKnown RBP20.86■□□□□ 0.93
PCNX1-209ENST00000554879 TWISTNBQ3B726 338 aaPredicted RBP20.86■□□□□ 0.93
PCNX1-209ENST00000554879 ADGRB1O14514 1584 aa20.86■□□□□ 0.93
PCNX1-209ENST00000554879 RARSP54136 660 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms