RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PTPRMP28827 1452 aa20.06■□□□□ 0.8
ARHGEF40-203ENST00000554514 ATAD2Q6PL18 1390 aa20.06■□□□□ 0.8
ARHGEF40-203ENST00000554514 USP35Q9P2H5 1018 aa20.06■□□□□ 0.8
ARHGEF40-203ENST00000554514 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
ARHGEF40-203ENST00000554514 DIAPH1O60610 1272 aaKnown RBP20.05■□□□□ 0.8
ARHGEF40-203ENST00000554514 DZIP1LQ8IYY4 767 aaKnown RBP20.05■□□□□ 0.8
ARHGEF40-203ENST00000554514 PREX1Q8TCU6 1659 aa20.05■□□□□ 0.8
ARHGEF40-203ENST00000554514 MVPQ14764 893 aaKnown RBP20.05■□□□□ 0.8
ARHGEF40-203ENST00000554514 ITPRIPQ8IWB1 547 aa20.04■□□□□ 0.8
ARHGEF40-203ENST00000554514 TMEM131LA2VDJ0 1609 aa20.04■□□□□ 0.8
ARHGEF40-203ENST00000554514 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
ARHGEF40-203ENST00000554514 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
ARHGEF40-203ENST00000554514 ZFYVE9O95405 1425 aa20.03■□□□□ 0.8
ARHGEF40-203ENST00000554514 USP19O94966 1318 aa20.02■□□□□ 0.8
ARHGEF40-203ENST00000554514 TRIM27P14373 513 aa20.01■□□□□ 0.79
ARHGEF40-203ENST00000554514 CD163L1Q9NR16 1453 aa20.01■□□□□ 0.79
ARHGEF40-203ENST00000554514 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
ARHGEF40-203ENST00000554514 HMOX1P09601 288 aa20■□□□□ 0.79
ARHGEF40-203ENST00000554514 ADGRB2O60241 1585 aa19.99■□□□□ 0.79
ARHGEF40-203ENST00000554514 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
ARHGEF40-203ENST00000554514 FRAT2O75474 233 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF40-203ENST00000554514 PRKAR2BP31323 418 aa19.98■□□□□ 0.79
ARHGEF40-203ENST00000554514 COL3A1P02461 1466 aaPredicted RBP19.98■□□□□ 0.79
ARHGEF40-203ENST00000554514 TSPOAP1O95153 1857 aa19.98■□□□□ 0.79
ARHGEF40-203ENST00000554514 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
ARHGEF40-203ENST00000554514 SLKQ9H2G2 1235 aaPredicted RBP19.97■□□□□ 0.79
ARHGEF40-203ENST00000554514 ATF7IPQ6VMQ6 1270 aa19.96■□□□□ 0.79
ARHGEF40-203ENST00000554514 ZRANB1Q9UGI0 708 aa19.96■□□□□ 0.79
ARHGEF40-203ENST00000554514 NLRP1Q9C000 1473 aa19.95■□□□□ 0.79
ARHGEF40-203ENST00000554514 AAMPQ13685 434 aa19.95■□□□□ 0.78
ARHGEF40-203ENST00000554514 TMEM57Q8N5G2 664 aa19.95■□□□□ 0.78
ARHGEF40-203ENST00000554514 UPF2Q9HAU5 1272 aaKnown RBP19.95■□□□□ 0.78
ARHGEF40-203ENST00000554514 EMILIN1Q9Y6C2 1016 aa19.95■□□□□ 0.78
ARHGEF40-203ENST00000554514 NCKAP5LQ9HCH0 1330 aa19.94■□□□□ 0.78
ARHGEF40-203ENST00000554514 POLKQ9UBT6 870 aa19.94■□□□□ 0.78
ARHGEF40-203ENST00000554514 TXNDC2Q86VQ3 553 aa19.93■□□□□ 0.78
ARHGEF40-203ENST00000554514 ELL2O00472 640 aaPredicted RBP19.93■□□□□ 0.78
ARHGEF40-203ENST00000554514 NME9Q86XW9 330 aa19.93■□□□□ 0.78
ARHGEF40-203ENST00000554514 ARHGEF40Q8TER5 1519 aa19.93■□□□□ 0.78
ARHGEF40-203ENST00000554514 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF40-203ENST00000554514 PHACTR3Q96KR7 559 aa19.92■□□□□ 0.78
ARHGEF40-203ENST00000554514 DDX19BQ9UMR2 479 aa19.92■□□□□ 0.78
ARHGEF40-203ENST00000554514 VIRMAQ69YN4 1812 aaKnown RBP19.92■□□□□ 0.78
ARHGEF40-203ENST00000554514 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
ARHGEF40-203ENST00000554514 SPRYD3Q8NCJ5 442 aa19.92■□□□□ 0.78
ARHGEF40-203ENST00000554514 GSE1Q14687 1217 aa19.91■□□□□ 0.78
ARHGEF40-203ENST00000554514 IL27Q8NEV9 243 aa19.91■□□□□ 0.78
ARHGEF40-203ENST00000554514 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
ARHGEF40-203ENST00000554514 BECN1Q14457 450 aa19.91■□□□□ 0.78
ARHGEF40-203ENST00000554514 RTN4Q9NQC3 1192 aaKnown RBP19.91■□□□□ 0.78
ARHGEF40-203ENST00000554514 RSPH6AQ9H0K4 717 aa19.9■□□□□ 0.78
ARHGEF40-203ENST00000554514 RIMS2Q9UQ26 1411 aa19.9■□□□□ 0.78
ARHGEF40-203ENST00000554514 FCHSD2O94868 740 aa19.9■□□□□ 0.78
ARHGEF40-203ENST00000554514 MFAP1P55081 439 aaKnown RBP19.89■□□□□ 0.77
ARHGEF40-203ENST00000554514 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
ARHGEF40-203ENST00000554514 IL16Q14005 1332 aa19.88■□□□□ 0.77
ARHGEF40-203ENST00000554514 CLTCQ00610 1675 aaKnown RBP19.88■□□□□ 0.77
ARHGEF40-203ENST00000554514 LRRC7Q96NW7 1537 aa19.88■□□□□ 0.77
ARHGEF40-203ENST00000554514 ANKRD26Q9UPS8 1709 aa19.88■□□□□ 0.77
ARHGEF40-203ENST00000554514 ESF1Q9H501 851 aaKnown RBP19.88■□□□□ 0.77
ARHGEF40-203ENST00000554514 MED14O60244 1454 aa19.88■□□□□ 0.77
ARHGEF40-203ENST00000554514 PNPLA6Q8IY17 1366 aa19.87■□□□□ 0.77
ARHGEF40-203ENST00000554514 A2ML1A8K2U0 1454 aa19.87■□□□□ 0.77
ARHGEF40-203ENST00000554514 NUTM2FA1L443 756 aa19.86■□□□□ 0.77
ARHGEF40-203ENST00000554514 IPO8O15397 1037 aaKnown RBP19.86■□□□□ 0.77
ARHGEF40-203ENST00000554514 KIF20BQ96Q89 1820 aa19.86■□□□□ 0.77
ARHGEF40-203ENST00000554514 KIF16BQ96L93 1317 aa19.86■□□□□ 0.77
ARHGEF40-203ENST00000554514 TBC1D32Q96NH3 1257 aa19.86■□□□□ 0.77
ARHGEF40-203ENST00000554514 WASLO00401 505 aaPredicted RBP19.86■□□□□ 0.77
ARHGEF40-203ENST00000554514 C1orf115Q9H7X2 142 aa19.86■□□□□ 0.77
ARHGEF40-203ENST00000554514 PPIP5K1Q6PFW1 1433 aa19.85■□□□□ 0.77
ARHGEF40-203ENST00000554514 TSPYL6Q8N831 410 aa19.85■□□□□ 0.77
ARHGEF40-203ENST00000554514 NFE2L2Q16236 605 aa19.84■□□□□ 0.77
ARHGEF40-203ENST00000554514 LNPKQ9C0E8 428 aa19.84■□□□□ 0.77
ARHGEF40-203ENST00000554514 METP08581 1390 aa19.84■□□□□ 0.77
ARHGEF40-203ENST00000554514 NUDT16Q96DE0 195 aaKnown RBP19.84■□□□□ 0.77
ARHGEF40-203ENST00000554514 ZBTB40Q9NUA8 1239 aa19.84■□□□□ 0.77
ARHGEF40-203ENST00000554514 HDAC1Q13547 482 aaPredicted RBP19.83■□□□□ 0.77
ARHGEF40-203ENST00000554514 FAM83GA6ND36 823 aa19.82■□□□□ 0.76
ARHGEF40-203ENST00000554514 FAM135BQ49AJ0 1406 aa19.82■□□□□ 0.76
ARHGEF40-203ENST00000554514 DCTN1Q14203 1278 aa19.82■□□□□ 0.76
ARHGEF40-203ENST00000554514 COG3Q96JB2 828 aa19.82■□□□□ 0.76
ARHGEF40-203ENST00000554514 TBC1D2Q9BYX2 928 aa19.82■□□□□ 0.76
ARHGEF40-203ENST00000554514 MAP2P11137 1827 aaKnown RBP19.82■□□□□ 0.76
ARHGEF40-203ENST00000554514 BRPF3Q9ULD4 1205 aa19.81■□□□□ 0.76
ARHGEF40-203ENST00000554514 SOX12O15370 315 aa19.81■□□□□ 0.76
ARHGEF40-203ENST00000554514 IL13P35225 146 aa19.8■□□□□ 0.76
ARHGEF40-203ENST00000554514 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
ARHGEF40-203ENST00000554514 C22orf23Q9BZE7 217 aa19.8■□□□□ 0.76
ARHGEF40-203ENST00000554514 ALDH1L2Q3SY69 923 aa19.79■□□□□ 0.76
ARHGEF40-203ENST00000554514 MBIPQ9NS73 344 aa19.79■□□□□ 0.76
ARHGEF40-203ENST00000554514 ATP7BP35670 1465 aa19.79■□□□□ 0.76
ARHGEF40-203ENST00000554514 DIP2BQ9P265 1576 aa19.79■□□□□ 0.76
ARHGEF40-203ENST00000554514 VAMP4O75379 141 aa19.79■□□□□ 0.76
ARHGEF40-203ENST00000554514 SMC5Q8IY18 1101 aa19.79■□□□□ 0.76
ARHGEF40-203ENST00000554514 CCDC61Q9Y6R9 512 aa19.77■□□□□ 0.76
ARHGEF40-203ENST00000554514 EDC4Q6P2E9 1401 aaKnown RBP19.77■□□□□ 0.75
ARHGEF40-203ENST00000554514 GNAI1P63096 354 aa19.76■□□□□ 0.75
ARHGEF40-203ENST00000554514 ANKRD45Q5TZF3 282 aa19.76■□□□□ 0.75
ARHGEF40-203ENST00000554514 MRPL50Q8N5N7 158 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms