RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 BIVM-ERCC5R4GMW8 1640 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 LORP23490 312 aaPredicted RBP3.55□□□□□ -1.84
PRPF39-207ENST00000554439 RFC5P40937 340 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 SPRYD7Q5W111 196 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 RETREG2Q8NC44 543 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 CUX1P39880 1505 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 CCER2I3L3R5 266 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 HNRNPUQ00839 825 aaKnown RBP eCLIP3.55□□□□□ -1.84
PRPF39-207ENST00000554439 IRF5Q13568 498 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 PXYLP1Q8TE99 480 aa3.55□□□□□ -1.84
PRPF39-207ENST00000554439 MAP3K7O43318 606 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 CLK2P49760 499 aaKnown RBP3.54□□□□□ -1.84
PRPF39-207ENST00000554439 MTRQ99707 1265 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 EPAS1Q99814 870 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 PPP2R2DQ66LE6 453 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 TTC13Q8NBP0 860 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 MTMR14Q8NCE2 650 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 BANK1Q8NDB2 785 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 RBM33Q96EV2 1170 aaKnown RBP3.54□□□□□ -1.84
PRPF39-207ENST00000554439 ADGRG1Q9Y653 693 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 KIF27Q86VH2 1401 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 TIAM1Q13009 1591 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 RAD21O60216 631 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 GDF9O60383 454 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 CCDC97Q96F63 343 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-207ENST00000554439 TBC1D2Q9BYX2 928 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 LIMD1Q9UGP4 676 aa3.54□□□□□ -1.84
PRPF39-207ENST00000554439 CDK11AQ9UQ88 783 aaPredicted RBP3.54□□□□□ -1.84
PRPF39-207ENST00000554439 LRRC9Q6ZRR7 1453 aa3.53□□□□□ -1.84
PRPF39-207ENST00000554439 CCDC184Q52MB2 194 aa3.53□□□□□ -1.84
PRPF39-207ENST00000554439 PADI6Q6TGC4 694 aa3.53□□□□□ -1.84
PRPF39-207ENST00000554439 RGS22Q8NE09 1264 aa3.53□□□□□ -1.84
PRPF39-207ENST00000554439 FANCIQ9NVI1 1328 aa3.53□□□□□ -1.84
PRPF39-207ENST00000554439 IRF7Q92985 503 aa3.53□□□□□ -1.84
PRPF39-207ENST00000554439 ZNF330Q9Y3S2 320 aaPredicted RBP3.53□□□□□ -1.84
PRPF39-207ENST00000554439 OATP04181 439 aa3.52□□□□□ -1.85
PRPF39-207ENST00000554439 B4GALNT3Q6L9W6 998 aa3.52□□□□□ -1.85
PRPF39-207ENST00000554439 GMPR2Q9P2T1 348 aaKnown RBP3.52□□□□□ -1.85
PRPF39-207ENST00000554439 AEBP1Q8IUX7 1158 aa3.52□□□□□ -1.85
PRPF39-207ENST00000554439 FBXW7Q969H0 707 aa3.52□□□□□ -1.85
PRPF39-207ENST00000554439 GDPD2Q9HCC8 539 aa3.52□□□□□ -1.85
PRPF39-207ENST00000554439 IGF1RP08069 1367 aa3.52□□□□□ -1.85
PRPF39-207ENST00000554439 TONSLQ96HA7 1378 aa3.52□□□□□ -1.85
PRPF39-207ENST00000554439 AXIN1O15169 862 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 SENP3-EIF4A1A0A087X0R7 540 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 POM121CA8CG34 1229 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 DEKP35659 375 aaKnown RBP3.51□□□□□ -1.85
PRPF39-207ENST00000554439 TYW1BQ6NUM6 668 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 SPIRE2Q8WWL2 714 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 KIAA1468Q9P260 1216 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 WASHC2AQ641Q2 1341 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 PCF11O94913 1555 aaKnown RBP3.51□□□□□ -1.85
PRPF39-207ENST00000554439 SOCS7O14512 581 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 ST8SIA5O15466 376 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 TMEM259Q4ZIN3 620 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 FAM9BQ8IZU0 186 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 ADAM33Q9BZ11 813 aa3.51□□□□□ -1.85
PRPF39-207ENST00000554439 CNGB1Q14028 1251 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-207ENST00000554439 QPCTQ16769 361 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 TUSC1Q2TAM9 212 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 C6orf132Q5T0Z8 1188 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 RIC3Q7Z5B4 369 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 ANKLE1Q8NAG6 615 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 RBM27Q9P2N5 1060 aaKnown RBP3.5□□□□□ -1.85
PRPF39-207ENST00000554439 CARMIL1Q5VZK9 1371 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 PTPRKQ15262 1439 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 FHOD3Q2V2M9 1422 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 AQRO60306 1485 aaKnown RBP eCLIP3.5□□□□□ -1.852e-7■■■■□ 20.5
PRPF39-207ENST00000554439 GDF11O95390 407 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 HSPA5P11021 654 aaKnown RBP3.5□□□□□ -1.85
PRPF39-207ENST00000554439 LCE2CQ5TA81 110 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 ZNF697Q5TEC3 545 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 GLMNQ92990 594 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 PPP4R2Q9NY27 417 aa3.5□□□□□ -1.85
PRPF39-207ENST00000554439 MAP3K1Q13233 1512 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 GPR37L1O60883 481 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 CERKQ8TCT0 537 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 ADAMTS19Q8TE59 1207 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 TRIM47Q96LD4 638 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 FAM198AQ9UFP1 575 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 TBC1D2BQ9UPU7 963 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 MTMR7Q9Y216 660 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 KDM5BQ9UGL1 1544 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 CCDC18Q5T9S5 1454 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 SPTLC1O15269 473 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 CD46P15529 392 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 SRPK2P78362 688 aaKnown RBP3.49□□□□□ -1.85
PRPF39-207ENST00000554439 RSBN1LQ6PCB5 846 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-207ENST00000554439 CFAP43Q8NDM7 1665 aa3.49□□□□□ -1.85
PRPF39-207ENST00000554439 C3orf80F5H4A9 247 aa3.48□□□□□ -1.85
PRPF39-207ENST00000554439 LILRB3O75022 631 aa3.48□□□□□ -1.85
PRPF39-207ENST00000554439 GSK3AP49840 483 aa3.48□□□□□ -1.85
PRPF39-207ENST00000554439 DIXDC1Q155Q3 683 aa3.48□□□□□ -1.85
PRPF39-207ENST00000554439 GJD4Q96KN9 370 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-207ENST00000554439 EYA1Q99502 592 aa3.48□□□□□ -1.85
PRPF39-207ENST00000554439 GZF1Q9H116 711 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-207ENST00000554439 DNMT3AQ9Y6K1 912 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-207ENST00000554439 PRSS12P56730 875 aa3.48□□□□□ -1.85
PRPF39-207ENST00000554439 RASSF7Q02833 373 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms