RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 ESCO1Q5FWF5 840 aa25.72■■□□□ 1.71
SNRPN-207ENST00000554227 PHF8Q9UPP1 1060 aa25.72■■□□□ 1.71
SNRPN-207ENST00000554227 FBLN1P23142 703 aa25.7■■□□□ 1.7
SNRPN-207ENST00000554227 ORAI2Q96SN7 254 aa25.7■■□□□ 1.7
SNRPN-207ENST00000554227 SSH2Q76I76 1423 aa25.7■■□□□ 1.7
SNRPN-207ENST00000554227 MTHFSP49914 203 aa25.69■■□□□ 1.7
SNRPN-207ENST00000554227 LRRC7Q96NW7 1537 aa25.68■■□□□ 1.7
SNRPN-207ENST00000554227 SENP3-EIF4A1A0A087X0R7 540 aa25.68■■□□□ 1.7
SNRPN-207ENST00000554227 DMRT2Q9Y5R5 561 aa25.67■■□□□ 1.7
SNRPN-207ENST00000554227 NCOA3Q9Y6Q9 1424 aa25.67■■□□□ 1.7
SNRPN-207ENST00000554227 ATF3P18847 181 aa25.66■■□□□ 1.7
SNRPN-207ENST00000554227 C1orf167Q5SNV9 1468 aa25.64■■□□□ 1.7
SNRPN-207ENST00000554227 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.69
SNRPN-207ENST00000554227 COG3Q96JB2 828 aa25.64■■□□□ 1.69
SNRPN-207ENST00000554227 ADAMTS8Q9UP79 889 aa25.63■■□□□ 1.69
SNRPN-207ENST00000554227 MST1RQ04912 1400 aa25.62■■□□□ 1.69
SNRPN-207ENST00000554227 MSH6P52701 1360 aa25.62■■□□□ 1.69
SNRPN-207ENST00000554227 DCCP43146 1447 aa25.61■■□□□ 1.69
SNRPN-207ENST00000554227 FOXO3O43524 673 aa25.6■■□□□ 1.69
SNRPN-207ENST00000554227 PIK3C2AO00443 1686 aa25.6■■□□□ 1.69
SNRPN-207ENST00000554227 TTC21AQ8NDW8 1320 aa25.6■■□□□ 1.69
SNRPN-207ENST00000554227 WDR43Q15061 677 aaKnown RBP eCLIP25.59■■□□□ 1.69
SNRPN-207ENST00000554227 SHPRHQ149N8 1683 aa25.59■■□□□ 1.69
SNRPN-207ENST00000554227 PAK3O75914 559 aaPredicted RBP25.59■■□□□ 1.69
SNRPN-207ENST00000554227 XPCQ01831 940 aaPredicted RBP25.59■■□□□ 1.69
SNRPN-207ENST00000554227 OVOS2A0A0J9YW53 1432 aa25.59■■□□□ 1.69
SNRPN-207ENST00000554227 OVOS2Q6IE36 1432 aa25.59■■□□□ 1.69
SNRPN-207ENST00000554227 PSME1Q06323 249 aa25.58■■□□□ 1.69
SNRPN-207ENST00000554227 CADPS2Q86UW7 1296 aa25.58■■□□□ 1.69
SNRPN-207ENST00000554227 POLKQ9UBT6 870 aa25.58■■□□□ 1.69
SNRPN-207ENST00000554227 NUTM2GQ5VZR2 741 aa25.57■■□□□ 1.68
SNRPN-207ENST00000554227 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
SNRPN-207ENST00000554227 PPM1GO15355 546 aaPredicted RBP25.55■■□□□ 1.68
SNRPN-207ENST00000554227 CFAP53Q96M91 514 aa25.55■■□□□ 1.68
SNRPN-207ENST00000554227 EMILIN1Q9Y6C2 1016 aa25.55■■□□□ 1.68
SNRPN-207ENST00000554227 RRS1Q15050 365 aaKnown RBP25.54■■□□□ 1.68
SNRPN-207ENST00000554227 SOX12O15370 315 aa25.54■■□□□ 1.68
SNRPN-207ENST00000554227 KIF1AQ12756 1690 aa25.53■■□□□ 1.68
SNRPN-207ENST00000554227 MARF1Q9Y4F3 1742 aaKnown RBP25.53■■□□□ 1.68
SNRPN-207ENST00000554227 NLRP6P59044 892 aa25.53■■□□□ 1.68
SNRPN-207ENST00000554227 ABTB2Q8N961 1025 aa25.53■■□□□ 1.68
SNRPN-207ENST00000554227 DDX17Q92841 729 aaKnown RBP25.53■■□□□ 1.68
SNRPN-207ENST00000554227 BLMP54132 1417 aaPredicted RBP25.53■■□□□ 1.68
SNRPN-207ENST00000554227 COL3A1P02461 1466 aaPredicted RBP25.52■■□□□ 1.68
SNRPN-207ENST00000554227 AATKQ6ZMQ8 1374 aa25.52■■□□□ 1.68
SNRPN-207ENST00000554227 USP31Q70CQ4 1352 aa25.52■■□□□ 1.68
SNRPN-207ENST00000554227 ZBED9Q6R2W3 1325 aa25.5■■□□□ 1.67
SNRPN-207ENST00000554227 KRT28Q7Z3Y7 464 aa25.49■■□□□ 1.67
SNRPN-207ENST00000554227 CCDC146Q8IYE0 955 aa25.49■■□□□ 1.67
SNRPN-207ENST00000554227 SALL2Q9Y467 1007 aaPredicted RBP25.49■■□□□ 1.67
SNRPN-207ENST00000554227 PNPLA6Q8IY17 1366 aa25.48■■□□□ 1.67
SNRPN-207ENST00000554227 INSRP06213 1382 aa25.48■■□□□ 1.67
SNRPN-207ENST00000554227 TRPM3Q9HCF6 1732 aaPredicted RBP25.47■■□□□ 1.67
SNRPN-207ENST00000554227 USP54Q70EL1 1684 aa25.46■■□□□ 1.67
SNRPN-207ENST00000554227 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
SNRPN-207ENST00000554227 SLAIN2Q9P270 581 aa25.46■■□□□ 1.67
SNRPN-207ENST00000554227 LTBP4Q8N2S1 1624 aa25.44■■□□□ 1.66
SNRPN-207ENST00000554227 PEAK1Q9H792 1746 aa25.44■■□□□ 1.66
SNRPN-207ENST00000554227 DIAPH1O60610 1272 aaKnown RBP25.44■■□□□ 1.66
SNRPN-207ENST00000554227 BRINP3Q76B58 766 aa25.44■■□□□ 1.66
SNRPN-207ENST00000554227 U2SURPO15042 1029 aaKnown RBP25.43■■□□□ 1.66
SNRPN-207ENST00000554227 PLEKHG5O94827 1062 aa25.43■■□□□ 1.66
SNRPN-207ENST00000554227 U2AF1L5P0DN76 240 aaPredicted RBP25.43■■□□□ 1.66
SNRPN-207ENST00000554227 U2AF1Q01081 240 aaKnown RBP eCLIP25.43■■□□□ 1.66
SNRPN-207ENST00000554227 LMOD2Q6P5Q4 547 aa25.43■■□□□ 1.66
SNRPN-207ENST00000554227 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
SNRPN-207ENST00000554227 MAP3K19Q56UN5 1328 aa25.41■■□□□ 1.66
SNRPN-207ENST00000554227 NUDCQ9Y266 331 aa25.4■■□□□ 1.66
SNRPN-207ENST00000554227 AEBP2Q6ZN18 517 aaPredicted RBP25.39■■□□□ 1.65
SNRPN-207ENST00000554227 NPHP3Q7Z494 1330 aa25.38■■□□□ 1.65
SNRPN-207ENST00000554227 APAF1O14727 1248 aa25.38■■□□□ 1.65
SNRPN-207ENST00000554227 ALS2Q96Q42 1657 aa25.38■■□□□ 1.65
SNRPN-207ENST00000554227 HSP90AB2PQ58FF8 381 aa25.37■■□□□ 1.65
SNRPN-207ENST00000554227 IL13P35225 146 aa25.36■■□□□ 1.65
SNRPN-207ENST00000554227 PXDNQ92626 1479 aa25.36■■□□□ 1.65
SNRPN-207ENST00000554227 RUNDC1Q96C34 613 aa25.33■■□□□ 1.65
SNRPN-207ENST00000554227 LTN1O94822 1766 aa25.33■■□□□ 1.65
SNRPN-207ENST00000554227 AMPHP49418 695 aa25.33■■□□□ 1.65
SNRPN-207ENST00000554227 NFAT5O94916 1531 aa25.33■■□□□ 1.64
SNRPN-207ENST00000554227 EIF4A2Q14240 407 aaKnown RBP25.32■■□□□ 1.64
SNRPN-207ENST00000554227 SBNO1A3KN83 1393 aa25.32■■□□□ 1.64
SNRPN-207ENST00000554227 HMOX1P09601 288 aa25.31■■□□□ 1.64
SNRPN-207ENST00000554227 RRP7AQ9Y3A4 280 aaKnown RBP25.3■■□□□ 1.64
SNRPN-207ENST00000554227 FLT4P35916 1363 aa25.3■■□□□ 1.64
SNRPN-207ENST00000554227 GCP02774 474 aa25.29■■□□□ 1.64
SNRPN-207ENST00000554227 TCP11L2Q8N4U5 519 aa25.29■■□□□ 1.64
SNRPN-207ENST00000554227 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
SNRPN-207ENST00000554227 USP19O94966 1318 aa25.29■■□□□ 1.64
SNRPN-207ENST00000554227 SLIT3O75094 1523 aa25.29■■□□□ 1.64
SNRPN-207ENST00000554227 ZBTB7CA1YPR0 619 aa25.28■■□□□ 1.64
SNRPN-207ENST00000554227 SPATA31A3Q5VYP0 1347 aa25.28■■□□□ 1.64
SNRPN-207ENST00000554227 TNS3Q68CZ2 1445 aa25.28■■□□□ 1.64
SNRPN-207ENST00000554227 MED1Q15648 1581 aaPredicted RBP25.28■■□□□ 1.64
SNRPN-207ENST00000554227 HOXC9P31274 260 aa25.28■■□□□ 1.64
SNRPN-207ENST00000554227 KCNH5Q8NCM2 988 aa25.28■■□□□ 1.64
SNRPN-207ENST00000554227 CDCA7LQ96GN5 454 aa25.28■■□□□ 1.64
SNRPN-207ENST00000554227 NEUROD2Q15784 382 aa25.27■■□□□ 1.64
SNRPN-207ENST00000554227 IQSEC2Q5JU85 1478 aa25.26■■□□□ 1.64
SNRPN-207ENST00000554227 SOS2Q07890 1332 aaPredicted RBP25.26■■□□□ 1.63
SNRPN-207ENST00000554227 CABLES1Q8TDN4 633 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms