RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
FOXN3-205ENST00000553904 PRDM11Q9NQV5 511 aa9.29□□□□□ -0.92
FOXN3-205ENST00000553904 BTG4Q9NY30 223 aa9.29□□□□□ -0.92
FOXN3-205ENST00000553904 ADGRB2O60241 1585 aa9.29□□□□□ -0.92
FOXN3-205ENST00000553904 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
FOXN3-205ENST00000553904 SLIT2O94813 1529 aa9.28□□□□□ -0.92
FOXN3-205ENST00000553904 CABP2Q9NPB3 220 aa9.27□□□□□ -0.93
FOXN3-205ENST00000553904 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
FOXN3-205ENST00000553904 POLR3AO14802 1390 aaPredicted RBP9.26□□□□□ -0.93
FOXN3-205ENST00000553904 ROCK2O75116 1388 aaKnown RBP9.26□□□□□ -0.93
FOXN3-205ENST00000553904 KRT27Q7Z3Y8 459 aa9.26□□□□□ -0.93
FOXN3-205ENST00000553904 CABP1Q9NZU7 370 aa9.26□□□□□ -0.93
FOXN3-205ENST00000553904 ZC3H6P61129 1189 aaKnown RBP9.25□□□□□ -0.93
FOXN3-205ENST00000553904 NUTM2GQ5VZR2 741 aa9.25□□□□□ -0.93
FOXN3-205ENST00000553904 RALGAPBQ86X10 1494 aa9.25□□□□□ -0.93
FOXN3-205ENST00000553904 GCP02774 474 aa9.24□□□□□ -0.93
FOXN3-205ENST00000553904 NLRP6P59044 892 aa9.24□□□□□ -0.93
FOXN3-205ENST00000553904 FAM98CQ17RN3 349 aaKnown RBP9.24□□□□□ -0.93
FOXN3-205ENST00000553904 CARD11Q9BXL7 1154 aa9.24□□□□□ -0.93
FOXN3-205ENST00000553904 KIAA1210Q9ULL0 1709 aa9.24□□□□□ -0.93
FOXN3-205ENST00000553904 TONSLQ96HA7 1378 aa9.24□□□□□ -0.93
FOXN3-205ENST00000553904 USP32Q8NFA0 1604 aa9.23□□□□□ -0.93
FOXN3-205ENST00000553904 PPIP5K1Q6PFW1 1433 aa9.23□□□□□ -0.93
FOXN3-205ENST00000553904 ATP7BP35670 1465 aa9.23□□□□□ -0.93
FOXN3-205ENST00000553904 C11orf95C9JLR9 678 aaPredicted RBP9.23□□□□□ -0.93
FOXN3-205ENST00000553904 STRN4Q9NRL3 753 aa9.23□□□□□ -0.93
FOXN3-205ENST00000553904 SPATA31A5Q5VU36 1347 aa9.23□□□□□ -0.93
FOXN3-205ENST00000553904 SPATA31A7Q8IWB4 1347 aa9.23□□□□□ -0.93
FOXN3-205ENST00000553904 RGPD8O14715 1765 aaPredicted RBP9.22□□□□□ -0.93
FOXN3-205ENST00000553904 BAG6P46379 1132 aa9.22□□□□□ -0.93
FOXN3-205ENST00000553904 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
FOXN3-205ENST00000553904 CHRNA2Q15822 529 aa9.22□□□□□ -0.93
FOXN3-205ENST00000553904 KCNH5Q8NCM2 988 aa9.22□□□□□ -0.93
FOXN3-205ENST00000553904 THRAP3Q9Y2W1 955 aaKnown RBP9.22□□□□□ -0.93
FOXN3-205ENST00000553904 KIAA0232Q92628 1395 aa9.22□□□□□ -0.93
FOXN3-205ENST00000553904 BLMP54132 1417 aaPredicted RBP9.22□□□□□ -0.93
FOXN3-205ENST00000553904 FAM196AQ6ZSG2 479 aa9.21□□□□□ -0.94
FOXN3-205ENST00000553904 PUS7Q96PZ0 661 aaKnown RBP9.21□□□□□ -0.94
FOXN3-205ENST00000553904 MARF1Q9Y4F3 1742 aaKnown RBP9.21□□□□□ -0.94
FOXN3-205ENST00000553904 SPATA31A1Q5TZJ5 1347 aa9.21□□□□□ -0.94
FOXN3-205ENST00000553904 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
FOXN3-205ENST00000553904 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-205ENST00000553904 TCP11L2Q8N4U5 519 aa9.2□□□□□ -0.94
FOXN3-205ENST00000553904 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
FOXN3-205ENST00000553904 TTC21AQ8NDW8 1320 aa9.2□□□□□ -0.94
FOXN3-205ENST00000553904 CPDO75976 1380 aa9.2□□□□□ -0.94
FOXN3-205ENST00000553904 ARHGEF28Q8N1W1 1705 aaKnown RBP9.19□□□□□ -0.94
FOXN3-205ENST00000553904 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.19□□□□□ -0.94
FOXN3-205ENST00000553904 ZBTB7CA1YPR0 619 aa9.19□□□□□ -0.94
FOXN3-205ENST00000553904 TERF2IPQ9NYB0 399 aa9.19□□□□□ -0.94
FOXN3-205ENST00000553904 USP19O94966 1318 aa9.19□□□□□ -0.94
FOXN3-205ENST00000553904 ITSN1Q15811 1721 aa9.19□□□□□ -0.94
FOXN3-205ENST00000553904 NWD2Q9ULI1 1742 aa9.19□□□□□ -0.94
FOXN3-205ENST00000553904 USP6P35125 1406 aa9.18□□□□□ -0.94
FOXN3-205ENST00000553904 COL14A1Q05707 1796 aaKnown RBP9.18□□□□□ -0.94
FOXN3-205ENST00000553904 TTC21BQ7Z4L5 1316 aa9.18□□□□□ -0.94
FOXN3-205ENST00000553904 TMC1Q8TDI8 760 aa9.18□□□□□ -0.94
FOXN3-205ENST00000553904 TIMELESSQ9UNS1 1208 aa9.18□□□□□ -0.94
FOXN3-205ENST00000553904 TRPM3Q9HCF6 1732 aaPredicted RBP9.17□□□□□ -0.94
FOXN3-205ENST00000553904 ALS2Q96Q42 1657 aa9.17□□□□□ -0.94
FOXN3-205ENST00000553904 GLI3P10071 1580 aa9.17□□□□□ -0.94
FOXN3-205ENST00000553904 SBNO2Q9Y2G9 1366 aa9.17□□□□□ -0.94
FOXN3-205ENST00000553904 LARP1Q6PKG0 1096 aaKnown RBP9.17□□□□□ -0.94
FOXN3-205ENST00000553904 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
FOXN3-205ENST00000553904 CDCA7Q9BWT1 371 aaPredicted RBP9.17□□□□□ -0.94
FOXN3-205ENST00000553904 AATKQ6ZMQ8 1374 aa9.16□□□□□ -0.94
FOXN3-205ENST00000553904 KTN1Q86UP2 1357 aaKnown RBP9.16□□□□□ -0.94
FOXN3-205ENST00000553904 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
FOXN3-205ENST00000553904 DEFB132Q7Z7B7 95 aa9.16□□□□□ -0.94
FOXN3-205ENST00000553904 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
FOXN3-205ENST00000553904 ARHGEF25Q86VW2 580 aa9.15□□□□□ -0.94
FOXN3-205ENST00000553904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.15□□□□□ -0.94
FOXN3-205ENST00000553904 SSH2Q76I76 1423 aa9.14□□□□□ -0.95
FOXN3-205ENST00000553904 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
FOXN3-205ENST00000553904 TRIM37O94972 964 aa9.14□□□□□ -0.95
FOXN3-205ENST00000553904 APBA3O96018 575 aa9.14□□□□□ -0.95
FOXN3-205ENST00000553904 DDB1Q16531 1140 aa9.14□□□□□ -0.95
FOXN3-205ENST00000553904 SLC12A5Q9H2X9 1139 aa9.14□□□□□ -0.95
FOXN3-205ENST00000553904 PLCH1Q4KWH8 1693 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 TRPM1Q7Z4N2 1603 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 ST20-MTHFSA0A0A6YYL1 179 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 EXOC5O00471 708 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 SOX12O15370 315 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 TMF1P82094 1093 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 EN1Q05925 392 aaPredicted RBP9.13□□□□□ -0.95
FOXN3-205ENST00000553904 FAM182BQ5T319 152 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 NBPF14Q5TI25 921 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 CRB1P82279 1406 aa9.13□□□□□ -0.95
FOXN3-205ENST00000553904 CPSF1Q10570 1443 aaKnown RBP9.13□□□□□ -0.95
FOXN3-205ENST00000553904 NINLQ9Y2I6 1382 aa9.12□□□□□ -0.95
FOXN3-205ENST00000553904 WDR17Q8IZU2 1322 aa9.12□□□□□ -0.95
FOXN3-205ENST00000553904 CARD10Q9BWT7 1032 aa9.12□□□□□ -0.95
FOXN3-205ENST00000553904 QRICH2Q9H0J4 1663 aa9.12□□□□□ -0.95
FOXN3-205ENST00000553904 ABCA3Q99758 1704 aa9.11□□□□□ -0.95
FOXN3-205ENST00000553904 TOPAZ1Q8N9V7 1692 aa9.11□□□□□ -0.95
FOXN3-205ENST00000553904 CAMTA1Q9Y6Y1 1673 aa9.11□□□□□ -0.95
FOXN3-205ENST00000553904 PCGF6Q9BYE7 350 aa9.11□□□□□ -0.95
FOXN3-205ENST00000553904 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
FOXN3-205ENST00000553904 COG3Q96JB2 828 aa9.1□□□□□ -0.95
FOXN3-205ENST00000553904 USP31Q70CQ4 1352 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms