RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 MAGI3Q5TCQ9 1506 aa18.6■□□□□ 0.57
ARHGEF40-202ENST00000553709 PES1O00541 588 aaKnown RBP18.59■□□□□ 0.57
ARHGEF40-202ENST00000553709 BACH2Q9BYV9 841 aa18.59■□□□□ 0.57
ARHGEF40-202ENST00000553709 MRE11P49959 708 aa18.58■□□□□ 0.57
ARHGEF40-202ENST00000553709 GNAI3P08754 354 aa18.58■□□□□ 0.56
ARHGEF40-202ENST00000553709 APPP05067 770 aa18.58■□□□□ 0.56
ARHGEF40-202ENST00000553709 NINLQ9Y2I6 1382 aa18.58■□□□□ 0.56
ARHGEF40-202ENST00000553709 TWISTNBQ3B726 338 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 TRDNQ13061 729 aa18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 NLRP6P59044 892 aa18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 TSR1Q2NL82 804 aaKnown RBP18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
ARHGEF40-202ENST00000553709 TPM1P09493 284 aa18.56■□□□□ 0.56
ARHGEF40-202ENST00000553709 NOB1Q9ULX3 412 aaKnown RBP18.56■□□□□ 0.56
ARHGEF40-202ENST00000553709 RIC3Q7Z5B4 369 aa18.56■□□□□ 0.56
ARHGEF40-202ENST00000553709 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
ARHGEF40-202ENST00000553709 FAM43AQ8N2R8 423 aa18.56■□□□□ 0.56
ARHGEF40-202ENST00000553709 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
ARHGEF40-202ENST00000553709 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
ARHGEF40-202ENST00000553709 GAS2L2Q8NHY3 880 aa18.55■□□□□ 0.56
ARHGEF40-202ENST00000553709 TRAK2O60296 914 aa18.55■□□□□ 0.56
ARHGEF40-202ENST00000553709 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF40-202ENST00000553709 CT47B1P0C2W7 299 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF40-202ENST00000553709 ZNF518AQ6AHZ1 1483 aa18.54■□□□□ 0.56
ARHGEF40-202ENST00000553709 TNNT3P45378 269 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF40-202ENST00000553709 NUTM2GQ5VZR2 741 aa18.54■□□□□ 0.56
ARHGEF40-202ENST00000553709 ZNF592Q92610 1267 aa18.54■□□□□ 0.56
ARHGEF40-202ENST00000553709 SASS6Q6UVJ0 657 aa18.54■□□□□ 0.56
ARHGEF40-202ENST00000553709 AIMP1Q12904 312 aaKnown RBP18.53■□□□□ 0.56
ARHGEF40-202ENST00000553709 CNTROBQ8N137 903 aa18.53■□□□□ 0.56
ARHGEF40-202ENST00000553709 ABCA8O94911 1581 aa18.53■□□□□ 0.56
ARHGEF40-202ENST00000553709 C1orf115Q9H7X2 142 aa18.53■□□□□ 0.56
ARHGEF40-202ENST00000553709 KDM5BQ9UGL1 1544 aa18.53■□□□□ 0.56
ARHGEF40-202ENST00000553709 CCAR2Q8N163 923 aaKnown RBP18.53■□□□□ 0.56
ARHGEF40-202ENST00000553709 POGZQ7Z3K3 1410 aa18.53■□□□□ 0.56
ARHGEF40-202ENST00000553709 NASPP49321 788 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF40-202ENST00000553709 ADGRL2O95490 1459 aa18.52■□□□□ 0.56
ARHGEF40-202ENST00000553709 RABEP1Q15276 862 aa18.52■□□□□ 0.56
ARHGEF40-202ENST00000553709 SURF6O75683 361 aaKnown RBP18.52■□□□□ 0.56
ARHGEF40-202ENST00000553709 CLASRPQ8N2M8 674 aaKnown RBP18.52■□□□□ 0.56
ARHGEF40-202ENST00000553709 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF40-202ENST00000553709 VPS53Q5VIR6 699 aa18.52■□□□□ 0.55
ARHGEF40-202ENST00000553709 FAM135AQ9P2D6 1515 aa18.51■□□□□ 0.55
ARHGEF40-202ENST00000553709 CCDC73Q6ZRK6 1079 aa18.51■□□□□ 0.55
ARHGEF40-202ENST00000553709 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF40-202ENST00000553709 TPM2P07951 284 aa18.51■□□□□ 0.55
ARHGEF40-202ENST00000553709 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
ARHGEF40-202ENST00000553709 HOOK1Q9UJC3 728 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 NEK4P51957 841 aa18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 PSMA5P28066 241 aa18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 ATF7IPQ6VMQ6 1270 aa18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 NFXL1Q6ZNB6 911 aa18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 RTEL1-TNFRSF6BF6WH68 1400 aa18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 NLRP2Q9NX02 1062 aa18.5■□□□□ 0.55
ARHGEF40-202ENST00000553709 MCM2P49736 904 aa18.49■□□□□ 0.55
ARHGEF40-202ENST00000553709 AMOTL1Q8IY63 956 aa18.49■□□□□ 0.55
ARHGEF40-202ENST00000553709 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
ARHGEF40-202ENST00000553709 CABP1Q9NZU7 370 aa18.49■□□□□ 0.55
ARHGEF40-202ENST00000553709 PPP6R1Q9UPN7 881 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 NOL10Q9BSC4 688 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 FAM13BQ9NYF5 915 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 A2MP01023 1474 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 GNAI2P04899 355 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 RALYLQ86SE5 291 aaKnown RBP18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 FSD1Q9BTV5 496 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 MBD3O95983 291 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 TXNDC2Q86VQ3 553 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 CHD1O14646 1710 aa18.48■□□□□ 0.55
ARHGEF40-202ENST00000553709 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
ARHGEF40-202ENST00000553709 FOSBP53539 338 aa18.47■□□□□ 0.55
ARHGEF40-202ENST00000553709 ANKRD20A12PQ8NF67 263 aa18.47■□□□□ 0.55
ARHGEF40-202ENST00000553709 ERICH2A1L162 156 aa18.47■□□□□ 0.55
ARHGEF40-202ENST00000553709 CAVIN1Q6NZI2 390 aaKnown RBP18.47■□□□□ 0.55
ARHGEF40-202ENST00000553709 VPS37DQ86XT2 251 aa18.47■□□□□ 0.55
ARHGEF40-202ENST00000553709 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
ARHGEF40-202ENST00000553709 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
ARHGEF40-202ENST00000553709 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
ARHGEF40-202ENST00000553709 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
ARHGEF40-202ENST00000553709 HOMER1Q86YM7 354 aa18.46■□□□□ 0.55
ARHGEF40-202ENST00000553709 WASHC4Q2M389 1173 aa18.46■□□□□ 0.55
ARHGEF40-202ENST00000553709 CCDC39Q9UFE4 941 aa18.46■□□□□ 0.55
ARHGEF40-202ENST00000553709 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.54
ARHGEF40-202ENST00000553709 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.54
ARHGEF40-202ENST00000553709 RNF214Q8ND24 703 aa18.46■□□□□ 0.54
ARHGEF40-202ENST00000553709 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 SLFN5Q08AF3 891 aa18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 SAFBQ15424 915 aaKnown RBP eCLIP18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 CCDC47Q96A33 483 aaKnown RBP18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 IPO7O95373 1038 aaKnown RBP18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 GPS2Q13227 327 aa18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 ZNF692Q9BU19 519 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF40-202ENST00000553709 UHRF1BP1LA0JNW5 1464 aa18.44■□□□□ 0.54
ARHGEF40-202ENST00000553709 ATF3P18847 181 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms