RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 TNS3Q68CZ2 1445 aa13.84□□□□□ -0.19
GSKIP-202ENST00000553699 CAMKK2Q96RR4 588 aa13.84□□□□□ -0.19
GSKIP-202ENST00000553699 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
GSKIP-202ENST00000553699 WASLO00401 505 aaPredicted RBP13.83□□□□□ -0.2
GSKIP-202ENST00000553699 PRELPP51888 382 aa13.83□□□□□ -0.2
GSKIP-202ENST00000553699 PSME1Q06323 249 aa13.83□□□□□ -0.2
GSKIP-202ENST00000553699 KRT28Q7Z3Y7 464 aa13.83□□□□□ -0.2
GSKIP-202ENST00000553699 ITSN1Q15811 1721 aa13.83□□□□□ -0.2
GSKIP-202ENST00000553699 MARF1Q9Y4F3 1742 aaKnown RBP13.83□□□□□ -0.2
GSKIP-202ENST00000553699 SBNO1A3KN83 1393 aa13.82□□□□□ -0.2
GSKIP-202ENST00000553699 ATP7BP35670 1465 aa13.81□□□□□ -0.2
GSKIP-202ENST00000553699 VPS72Q15906 364 aa13.81□□□□□ -0.2
GSKIP-202ENST00000553699 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
GSKIP-202ENST00000553699 ARHGEF10O15013 1369 aa13.81□□□□□ -0.2
GSKIP-202ENST00000553699 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
GSKIP-202ENST00000553699 PMFBP1Q8TBY8 1022 aa13.8□□□□□ -0.2
GSKIP-202ENST00000553699 SIN3AQ96ST3 1273 aa13.8□□□□□ -0.2
GSKIP-202ENST00000553699 UTRNP46939 3433 aa13.8□□□□□ -0.2
GSKIP-202ENST00000553699 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
GSKIP-202ENST00000553699 ABCA3Q99758 1704 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.79□□□□□ -0.2
GSKIP-202ENST00000553699 TRPM3Q9HCF6 1732 aaPredicted RBP13.79□□□□□ -0.2
GSKIP-202ENST00000553699 A0A0G2JS52 829 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 HSPA6P17066 643 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 MYT1Q01538 1121 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 TRIM26Q12899 539 aaPredicted RBP13.79□□□□□ -0.2
GSKIP-202ENST00000553699 NBPF1Q3BBV0 1214 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 CCDC9Q9Y3X0 531 aaKnown RBP13.79□□□□□ -0.2
GSKIP-202ENST00000553699 CHD4Q14839 1912 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 GPRASP1Q5JY77 1395 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 SLIT2O94813 1529 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
GSKIP-202ENST00000553699 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
GSKIP-202ENST00000553699 PARD3Q8TEW0 1356 aa13.78□□□□□ -0.2
GSKIP-202ENST00000553699 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
GSKIP-202ENST00000553699 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.21
GSKIP-202ENST00000553699 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
GSKIP-202ENST00000553699 QRICH2Q9H0J4 1663 aa13.77□□□□□ -0.21
GSKIP-202ENST00000553699 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
GSKIP-202ENST00000553699 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
GSKIP-202ENST00000553699 LMOD2Q6P5Q4 547 aa13.76□□□□□ -0.21
GSKIP-202ENST00000553699 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
GSKIP-202ENST00000553699 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
GSKIP-202ENST00000553699 CDK19Q9BWU1 502 aa13.75□□□□□ -0.21
GSKIP-202ENST00000553699 ROCK2O75116 1388 aaKnown RBP13.74□□□□□ -0.21
GSKIP-202ENST00000553699 PLCH1Q4KWH8 1693 aa13.73□□□□□ -0.21
GSKIP-202ENST00000553699 APBA3O96018 575 aa13.73□□□□□ -0.21
GSKIP-202ENST00000553699 FAM182BQ5T319 152 aa13.73□□□□□ -0.21
GSKIP-202ENST00000553699 COL13A1Q5TAT6 717 aaPredicted RBP13.73□□□□□ -0.21
GSKIP-202ENST00000553699 SYT17Q9BSW7 474 aa13.73□□□□□ -0.21
GSKIP-202ENST00000553699 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
GSKIP-202ENST00000553699 TONSLQ96HA7 1378 aa13.72□□□□□ -0.21
GSKIP-202ENST00000553699 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
GSKIP-202ENST00000553699 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
GSKIP-202ENST00000553699 NWD2Q9ULI1 1742 aa13.72□□□□□ -0.21
GSKIP-202ENST00000553699 CRYBG1Q9Y4K1 1723 aa13.72□□□□□ -0.21
GSKIP-202ENST00000553699 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
GSKIP-202ENST00000553699 SRPK2P78362 688 aaKnown RBP13.71□□□□□ -0.21
GSKIP-202ENST00000553699 TNS4Q8IZW8 715 aa13.71□□□□□ -0.21
GSKIP-202ENST00000553699 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
GSKIP-202ENST00000553699 TRIM37O94972 964 aa13.7□□□□□ -0.22
GSKIP-202ENST00000553699 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
GSKIP-202ENST00000553699 PPIP5K1Q6PFW1 1433 aa13.7□□□□□ -0.22
GSKIP-202ENST00000553699 ACEP12821 1306 aa13.69□□□□□ -0.22
GSKIP-202ENST00000553699 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
GSKIP-202ENST00000553699 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
GSKIP-202ENST00000553699 PLEKHG3A1L390 1219 aa13.68□□□□□ -0.22
GSKIP-202ENST00000553699 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
GSKIP-202ENST00000553699 EVC2Q86UK5 1308 aa13.67□□□□□ -0.22
GSKIP-202ENST00000553699 FAM196AQ6ZSG2 479 aa13.67□□□□□ -0.22
GSKIP-202ENST00000553699 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
GSKIP-202ENST00000553699 NRAPQ86VF7 1730 aa13.67□□□□□ -0.22
GSKIP-202ENST00000553699 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
GSKIP-202ENST00000553699 SBNO2Q9Y2G9 1366 aa13.65□□□□□ -0.22
GSKIP-202ENST00000553699 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
GSKIP-202ENST00000553699 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
GSKIP-202ENST00000553699 GPR162Q16538 588 aa13.64□□□□□ -0.23
GSKIP-202ENST00000553699 CARD11Q9BXL7 1154 aa13.64□□□□□ -0.23
GSKIP-202ENST00000553699 USP6P35125 1406 aa13.64□□□□□ -0.23
GSKIP-202ENST00000553699 PTGER2P43116 358 aa13.63□□□□□ -0.23
GSKIP-202ENST00000553699 PRDM11Q9NQV5 511 aa13.63□□□□□ -0.23
GSKIP-202ENST00000553699 ABTB2Q8N961 1025 aa13.62□□□□□ -0.23
GSKIP-202ENST00000553699 BTG4Q9NY30 223 aa13.62□□□□□ -0.23
GSKIP-202ENST00000553699 CABP1Q9NZU7 370 aa13.62□□□□□ -0.23
GSKIP-202ENST00000553699 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
GSKIP-202ENST00000553699 ZBTB7AO95365 584 aa13.61□□□□□ -0.23
GSKIP-202ENST00000553699 USP19O94966 1318 aa13.61□□□□□ -0.23
GSKIP-202ENST00000553699 NUTM2GQ5VZR2 741 aa13.6□□□□□ -0.23
GSKIP-202ENST00000553699 DNAJC5GQ8N7S2 189 aa13.6□□□□□ -0.23
GSKIP-202ENST00000553699 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
GSKIP-202ENST00000553699 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
GSKIP-202ENST00000553699 APLP1P51693 650 aa13.59□□□□□ -0.23
GSKIP-202ENST00000553699 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
GSKIP-202ENST00000553699 RREB1Q92766 1687 aa13.59□□□□□ -0.23
GSKIP-202ENST00000553699 NUP188Q5SRE5 1749 aa13.59□□□□□ -0.23
GSKIP-202ENST00000553699 CPDO75976 1380 aa13.58□□□□□ -0.23
GSKIP-202ENST00000553699 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
GSKIP-202ENST00000553699 PIK3C2AO00443 1686 aa13.58□□□□□ -0.24
GSKIP-202ENST00000553699 LMO7Q8WWI1 1683 aa13.57□□□□□ -0.24
GSKIP-202ENST00000553699 SHANK3Q9BYB0 1731 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms