RNA–Protein interactions for RNA: ENST00000553621.1

AC004817.1-201, humanhuman

TSL 4 BASIC

Gene AC004817.1, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004817.1-201ENST00000553621 VPS72Q15906 364 aa11.31□□□□□ -0.6
AC004817.1-201ENST00000553621 NUTM2GQ5VZR2 741 aa11.31□□□□□ -0.6
AC004817.1-201ENST00000553621 BTG4Q9NY30 223 aa11.31□□□□□ -0.6
AC004817.1-201ENST00000553621 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.31□□□□□ -0.6
AC004817.1-201ENST00000553621 TRPM3Q9HCF6 1732 aaPredicted RBP11.31□□□□□ -0.6
AC004817.1-201ENST00000553621 ATP7BP35670 1465 aa11.31□□□□□ -0.6
AC004817.1-201ENST00000553621 HRCP23327 699 aa11.3□□□□□ -0.6
AC004817.1-201ENST00000553621 NBPF1Q3BBV0 1214 aa11.3□□□□□ -0.6
AC004817.1-201ENST00000553621 NUDT16Q96DE0 195 aaKnown RBP11.3□□□□□ -0.6
AC004817.1-201ENST00000553621 ARHGEF28Q8N1W1 1705 aaKnown RBP11.29□□□□□ -0.6
AC004817.1-201ENST00000553621 FAM98CQ17RN3 349 aaKnown RBP11.29□□□□□ -0.6
AC004817.1-201ENST00000553621 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
AC004817.1-201ENST00000553621 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
AC004817.1-201ENST00000553621 BLMP54132 1417 aaPredicted RBP11.27□□□□□ -0.6
AC004817.1-201ENST00000553621 ALS2Q96Q42 1657 aa11.27□□□□□ -0.6
AC004817.1-201ENST00000553621 CHRNA2Q15822 529 aa11.27□□□□□ -0.61
AC004817.1-201ENST00000553621 FAM182BQ5T319 152 aa11.27□□□□□ -0.61
AC004817.1-201ENST00000553621 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.61
AC004817.1-201ENST00000553621 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.61
AC004817.1-201ENST00000553621 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
AC004817.1-201ENST00000553621 NRAPQ86VF7 1730 aa11.26□□□□□ -0.61
AC004817.1-201ENST00000553621 ZC3H6P61129 1189 aaKnown RBP11.26□□□□□ -0.61
AC004817.1-201ENST00000553621 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
AC004817.1-201ENST00000553621 ACEP12821 1306 aa11.26□□□□□ -0.61
AC004817.1-201ENST00000553621 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
AC004817.1-201ENST00000553621 SRPK2P78362 688 aaKnown RBP11.25□□□□□ -0.61
AC004817.1-201ENST00000553621 CCDC125Q86Z20 511 aa11.25□□□□□ -0.61
AC004817.1-201ENST00000553621 SIN3AQ96ST3 1273 aa11.25□□□□□ -0.61
AC004817.1-201ENST00000553621 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
AC004817.1-201ENST00000553621 STRN4Q9NRL3 753 aa11.25□□□□□ -0.61
AC004817.1-201ENST00000553621 NWD2Q9ULI1 1742 aa11.25□□□□□ -0.61
AC004817.1-201ENST00000553621 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
AC004817.1-201ENST00000553621 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
AC004817.1-201ENST00000553621 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 EP400Q96L91 3159 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 NEUROD1Q13562 356 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 CCDC61Q9Y6R9 512 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 SPATA31A5Q5VU36 1347 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 SPATA31A7Q8IWB4 1347 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 CENPJQ9HC77 1338 aaPredicted RBP11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
AC004817.1-201ENST00000553621 ZBTB7CA1YPR0 619 aa11.22□□□□□ -0.61
AC004817.1-201ENST00000553621 POLR3AO14802 1390 aaPredicted RBP11.22□□□□□ -0.61
AC004817.1-201ENST00000553621 DSG3P32926 999 aa11.22□□□□□ -0.61
AC004817.1-201ENST00000553621 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
AC004817.1-201ENST00000553621 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
AC004817.1-201ENST00000553621 PHRF1Q9P1Y6 1649 aaKnown RBP11.22□□□□□ -0.61
AC004817.1-201ENST00000553621 ITSN1Q15811 1721 aa11.21□□□□□ -0.61
AC004817.1-201ENST00000553621 ABTB2Q8N961 1025 aa11.21□□□□□ -0.61
AC004817.1-201ENST00000553621 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
AC004817.1-201ENST00000553621 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
AC004817.1-201ENST00000553621 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
AC004817.1-201ENST00000553621 KIAA1210Q9ULL0 1709 aa11.2□□□□□ -0.62
AC004817.1-201ENST00000553621 SPATA31A1Q5TZJ5 1347 aa11.19□□□□□ -0.62
AC004817.1-201ENST00000553621 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
AC004817.1-201ENST00000553621 CABP1Q9NZU7 370 aa11.19□□□□□ -0.62
AC004817.1-201ENST00000553621 THSD7AQ9UPZ6 1657 aa11.18□□□□□ -0.62
AC004817.1-201ENST00000553621 BAG6P46379 1132 aa11.18□□□□□ -0.62
AC004817.1-201ENST00000553621 EVA1CP58658 441 aa11.18□□□□□ -0.62
AC004817.1-201ENST00000553621 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
AC004817.1-201ENST00000553621 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
AC004817.1-201ENST00000553621 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
AC004817.1-201ENST00000553621 USP19O94966 1318 aa11.17□□□□□ -0.62
AC004817.1-201ENST00000553621 CAMTA1Q9Y6Y1 1673 aa11.17□□□□□ -0.62
AC004817.1-201ENST00000553621 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
AC004817.1-201ENST00000553621 TRIM37O94972 964 aa11.16□□□□□ -0.62
AC004817.1-201ENST00000553621 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
AC004817.1-201ENST00000553621 USP6P35125 1406 aa11.16□□□□□ -0.62
AC004817.1-201ENST00000553621 SOX12O15370 315 aa11.15□□□□□ -0.62
AC004817.1-201ENST00000553621 GCP02774 474 aa11.15□□□□□ -0.62
AC004817.1-201ENST00000553621 EZH2Q15910 746 aaKnown RBP11.15□□□□□ -0.62
AC004817.1-201ENST00000553621 NLRP13Q86W25 1043 aa11.15□□□□□ -0.62
AC004817.1-201ENST00000553621 TRPM1Q7Z4N2 1603 aa11.15□□□□□ -0.62
AC004817.1-201ENST00000553621 CAPN15O75808 1086 aa11.14□□□□□ -0.63
AC004817.1-201ENST00000553621 NLRP6P59044 892 aa11.14□□□□□ -0.63
AC004817.1-201ENST00000553621 CPDO75976 1380 aa11.14□□□□□ -0.63
AC004817.1-201ENST00000553621 COL5A2P05997 1499 aaPredicted RBP11.13□□□□□ -0.63
AC004817.1-201ENST00000553621 EVC2Q86UK5 1308 aa11.13□□□□□ -0.63
AC004817.1-201ENST00000553621 R3HDM1Q15032 1099 aaKnown RBP11.13□□□□□ -0.63
AC004817.1-201ENST00000553621 TCP11L2Q8N4U5 519 aa11.13□□□□□ -0.63
AC004817.1-201ENST00000553621 LMO7Q8WWI1 1683 aa11.13□□□□□ -0.63
AC004817.1-201ENST00000553621 SRCAPQ6ZRS2 3230 aa11.13□□□□□ -0.63
AC004817.1-201ENST00000553621 PDE3BQ13370 1112 aa11.12□□□□□ -0.63
AC004817.1-201ENST00000553621 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
AC004817.1-201ENST00000553621 SLIT3O75094 1523 aa11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 APBA3O96018 575 aa11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 BARGINQ6ZT62 677 aa11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 RGPD1P0DJD0 1748 aa11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 TNS1Q9HBL0 1735 aaKnown RBP11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
AC004817.1-201ENST00000553621 TTC21BQ7Z4L5 1316 aa11.1□□□□□ -0.63
AC004817.1-201ENST00000553621 CRB1P82279 1406 aa11.09□□□□□ -0.63
AC004817.1-201ENST00000553621 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
AC004817.1-201ENST00000553621 CAMKK2Q96RR4 588 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms