RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
LETMD1-237ENST00000553175 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
LETMD1-237ENST00000553175 MRPL14Q6P1L8 145 aaKnown RBP10.26□□□□□ -0.77
LETMD1-237ENST00000553175 MTMR2Q13614 643 aa10.25□□□□□ -0.77
LETMD1-237ENST00000553175 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
LETMD1-237ENST00000553175 LYPD8Q6UX82 237 aa10.23□□□□□ -0.77
LETMD1-237ENST00000553175 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
LETMD1-237ENST00000553175 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
LETMD1-237ENST00000553175 SOBPA7XYQ1 873 aa10.22□□□□□ -0.77
LETMD1-237ENST00000553175 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
LETMD1-237ENST00000553175 WDR4P57081 412 aaKnown RBP10.22□□□□□ -0.77
LETMD1-237ENST00000553175 ADH1CP00326 375 aa10.21□□□□□ -0.77
LETMD1-237ENST00000553175 AMHR2Q16671 573 aa10.21□□□□□ -0.77
LETMD1-237ENST00000553175 GJA5P36382 358 aa10.2□□□□□ -0.78
LETMD1-237ENST00000553175 BARGINQ6ZT62 677 aa10.2□□□□□ -0.78
LETMD1-237ENST00000553175 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
LETMD1-237ENST00000553175 FOXJ1Q92949 421 aa10.2□□□□□ -0.78
LETMD1-237ENST00000553175 PCDHB15Q9Y5E8 787 aa10.2□□□□□ -0.78
LETMD1-237ENST00000553175 CFAP99D6REC4 459 aa10.19□□□□□ -0.78
LETMD1-237ENST00000553175 SCARF1Q14162 830 aa10.19□□□□□ -0.78
LETMD1-237ENST00000553175 ZMYND10O75800 440 aa10.18□□□□□ -0.78
LETMD1-237ENST00000553175 F12P00748 615 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-237ENST00000553175 RSBN1LQ6PCB5 846 aaPredicted RBP10.18□□□□□ -0.78
LETMD1-237ENST00000553175 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
LETMD1-237ENST00000553175 FAM174AQ8TBP5 190 aa10.18□□□□□ -0.78
LETMD1-237ENST00000553175 BEGAINQ9BUH8 593 aa10.18□□□□□ -0.78
LETMD1-237ENST00000553175 LOC100996750A0A140TA64 210 aa10.17□□□□□ -0.78
LETMD1-237ENST00000553175 NR3C2P08235 984 aa10.17□□□□□ -0.78
LETMD1-237ENST00000553175 GRM5P41594 1212 aa10.17□□□□□ -0.78
LETMD1-237ENST00000553175 C4orf48Q5BLP8 95 aa10.17□□□□□ -0.78
LETMD1-237ENST00000553175 KRTAP4-6Q9BYQ5 205 aa10.17□□□□□ -0.78
LETMD1-237ENST00000553175 TBC1D2Q9BYX2 928 aa10.17□□□□□ -0.78
LETMD1-237ENST00000553175 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
LETMD1-237ENST00000553175 CTHP32929 405 aa10.16□□□□□ -0.78
LETMD1-237ENST00000553175 TTLL12Q14166 644 aaPredicted RBP10.16□□□□□ -0.78
LETMD1-237ENST00000553175 ITPKCQ96DU7 683 aa10.16□□□□□ -0.78
LETMD1-237ENST00000553175 MAP10Q9P2G4 905 aa10.16□□□□□ -0.78
LETMD1-237ENST00000553175 SPTLC1O15269 473 aa10.15□□□□□ -0.78
LETMD1-237ENST00000553175 ZIC2O95409 532 aaPredicted RBP10.14□□□□□ -0.79
LETMD1-237ENST00000553175 HRCP23327 699 aa10.14□□□□□ -0.79
LETMD1-237ENST00000553175 NR5A1Q13285 461 aa10.13□□□□□ -0.79
LETMD1-237ENST00000553175 ARID5BQ14865 1188 aa10.12□□□□□ -0.79
LETMD1-237ENST00000553175 PER1O15534 1290 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-237ENST00000553175 PPFIA3O75145 1194 aa10.11□□□□□ -0.79
LETMD1-237ENST00000553175 GSK3AP49840 483 aa10.11□□□□□ -0.79
LETMD1-237ENST00000553175 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
LETMD1-237ENST00000553175 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
LETMD1-237ENST00000553175 DIXDC1Q155Q3 683 aa10.09□□□□□ -0.79
LETMD1-237ENST00000553175 PRPF38BQ5VTL8 546 aaKnown RBP10.09□□□□□ -0.79
LETMD1-237ENST00000553175 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
LETMD1-237ENST00000553175 CABLES1Q8TDN4 633 aa10.09□□□□□ -0.79
LETMD1-237ENST00000553175 ZBTB3Q9H5J0 574 aa10.09□□□□□ -0.79
LETMD1-237ENST00000553175 SOS2Q07890 1332 aaPredicted RBP10.08□□□□□ -0.8
LETMD1-237ENST00000553175 MAN1A2O60476 641 aa10.08□□□□□ -0.8
LETMD1-237ENST00000553175 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
LETMD1-237ENST00000553175 SH3RF1Q7Z6J0 888 aa10.07□□□□□ -0.8
LETMD1-237ENST00000553175 MEIOBQ8N635 442 aa10.07□□□□□ -0.8
LETMD1-237ENST00000553175 C1QTNF2Q9BXJ5 285 aa10.07□□□□□ -0.8
LETMD1-237ENST00000553175 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
LETMD1-237ENST00000553175 BPHLQ86WA6 291 aaPredicted RBP10.06□□□□□ -0.8
LETMD1-237ENST00000553175 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
LETMD1-237ENST00000553175 DNMT3LQ9UJW3 386 aa10.06□□□□□ -0.8
LETMD1-237ENST00000553175 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
LETMD1-237ENST00000553175 TRIM66O15016 1216 aa10.04□□□□□ -0.8
LETMD1-237ENST00000553175 BMP2P12643 396 aa10.04□□□□□ -0.8
LETMD1-237ENST00000553175 KRT76Q01546 638 aa10.04□□□□□ -0.8
LETMD1-237ENST00000553175 AGERQ15109 404 aa10.03□□□□□ -0.8
LETMD1-237ENST00000553175 QPCTQ16769 361 aa10.02□□□□□ -0.81
LETMD1-237ENST00000553175 LIMD1Q9UGP4 676 aa10.02□□□□□ -0.81
LETMD1-237ENST00000553175 MAP4K5Q9Y4K4 846 aa10.02□□□□□ -0.81
LETMD1-237ENST00000553175 SUZ12Q15022 739 aaKnown RBP10.01□□□□□ -0.81
LETMD1-237ENST00000553175 CSPP1Q1MSJ5 1256 aa10.01□□□□□ -0.81
LETMD1-237ENST00000553175 SH3BP5LQ7L8J4 393 aa10.01□□□□□ -0.81
LETMD1-237ENST00000553175 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
LETMD1-237ENST00000553175 LILRB3O75022 631 aa10□□□□□ -0.81
LETMD1-237ENST00000553175 UPP2O95045 317 aa10□□□□□ -0.81
LETMD1-237ENST00000553175 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
LETMD1-237ENST00000553175 KCTD17Q8N5Z5 321 aa9.99□□□□□ -0.81
LETMD1-237ENST00000553175 FSHRP23945 695 aa9.98□□□□□ -0.81
LETMD1-237ENST00000553175 MYSM1Q5VVJ2 828 aa9.98□□□□□ -0.81
LETMD1-237ENST00000553175 ARMC2Q8NEN0 867 aa9.98□□□□□ -0.81
LETMD1-237ENST00000553175 TSEN34Q9BSV6 310 aaKnown RBP9.98□□□□□ -0.81
LETMD1-237ENST00000553175 PTSQ03393 145 aa9.96□□□□□ -0.82
LETMD1-237ENST00000553175 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
LETMD1-237ENST00000553175 VASH1Q7L8A9 365 aaPredicted RBP9.96□□□□□ -0.82
LETMD1-237ENST00000553175 CNTNAP3BQ96NU0 1288 aa9.96□□□□□ -0.82
LETMD1-237ENST00000553175 CNTNAP3Q9BZ76 1288 aa9.96□□□□□ -0.82
LETMD1-237ENST00000553175 EMILIN1Q9Y6C2 1016 aa9.96□□□□□ -0.82
LETMD1-237ENST00000553175 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.95□□□□□ -0.82
LETMD1-237ENST00000553175 Q6ZVU0 165 aa9.95□□□□□ -0.82
LETMD1-237ENST00000553175 CCDC116Q8IYX3 515 aa9.95□□□□□ -0.82
LETMD1-237ENST00000553175 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
LETMD1-237ENST00000553175 TSC1Q92574 1164 aa9.95□□□□□ -0.82
LETMD1-237ENST00000553175 AK7Q96M32 723 aa9.95□□□□□ -0.82
LETMD1-237ENST00000553175 NUTM2BA6NNL0 878 aaPredicted RBP9.94□□□□□ -0.82
LETMD1-237ENST00000553175 TTLL8A6PVC2 850 aa9.94□□□□□ -0.82
LETMD1-237ENST00000553175 NUTM2EB1AL46 878 aaPredicted RBP9.94□□□□□ -0.82
LETMD1-237ENST00000553175 NUTM2DQ5VT03 806 aaPredicted RBP9.94□□□□□ -0.82
LETMD1-237ENST00000553175 NUTM2AQ8IVF1 878 aaPredicted RBP9.94□□□□□ -0.82
LETMD1-237ENST00000553175 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms