RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
HDAC7-230ENST00000552960 TRMT2AQ8IZ69 625 aaKnown RBP15.73■□□□□ 0.11
HDAC7-230ENST00000552960 RSPH6AQ9H0K4 717 aa15.73■□□□□ 0.11
HDAC7-230ENST00000552960 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
HDAC7-230ENST00000552960 FBLN1P23142 703 aa15.72■□□□□ 0.11
HDAC7-230ENST00000552960 CABP1Q9NZU7 370 aa15.72■□□□□ 0.11
HDAC7-230ENST00000552960 PDE3AQ14432 1141 aa15.72■□□□□ 0.11
HDAC7-230ENST00000552960 PCDHB15Q9Y5E8 787 aa15.72■□□□□ 0.11
HDAC7-230ENST00000552960 GGNBP2Q9H3C7 697 aa15.72■□□□□ 0.11
HDAC7-230ENST00000552960 DNAJC5Q9H3Z4 198 aa15.72■□□□□ 0.11
HDAC7-230ENST00000552960 PDZRN3Q9UPQ7 1066 aa15.72■□□□□ 0.11
HDAC7-230ENST00000552960 TMEM2Q9UHN6 1383 aa15.71■□□□□ 0.11
HDAC7-230ENST00000552960 RLBP1P12271 317 aa15.71■□□□□ 0.11
HDAC7-230ENST00000552960 MORC1Q86VD1 984 aa15.71■□□□□ 0.11
HDAC7-230ENST00000552960 TBC1D2Q9BYX2 928 aa15.71■□□□□ 0.11
HDAC7-230ENST00000552960 RRAGDQ9NQL2 400 aaPredicted RBP15.71■□□□□ 0.11
HDAC7-230ENST00000552960 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
HDAC7-230ENST00000552960 A0A1W2PP64 1363 aa15.7■□□□□ 0.1
HDAC7-230ENST00000552960 NRXN3Q9Y4C0 1643 aa15.7■□□□□ 0.1
HDAC7-230ENST00000552960 SLC24A1O60721 1099 aa15.69■□□□□ 0.1
HDAC7-230ENST00000552960 L1TD1Q5T7N2 865 aaKnown RBP15.69■□□□□ 0.1
HDAC7-230ENST00000552960 NAP1L5Q96NT1 182 aaPredicted RBP15.69■□□□□ 0.1
HDAC7-230ENST00000552960 PMFBP1Q8TBY8 1022 aa15.69■□□□□ 0.1
HDAC7-230ENST00000552960 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
HDAC7-230ENST00000552960 GOLGA6L3A6NEY3 463 aa15.67■□□□□ 0.1
HDAC7-230ENST00000552960 RARSP54136 660 aaKnown RBP15.67■□□□□ 0.1
HDAC7-230ENST00000552960 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
HDAC7-230ENST00000552960 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.67■□□□□ 0.1
HDAC7-230ENST00000552960 PANK2Q9BZ23 570 aa15.67■□□□□ 0.1
HDAC7-230ENST00000552960 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
HDAC7-230ENST00000552960 UBR1Q8IWV7 1749 aa15.66■□□□□ 0.1
HDAC7-230ENST00000552960 SETD1AO15047 1707 aaKnown RBP15.66■□□□□ 0.1
HDAC7-230ENST00000552960 MTHFSP49914 203 aa15.66■□□□□ 0.1
HDAC7-230ENST00000552960 C3P01024 1663 aa15.65■□□□□ 0.1
HDAC7-230ENST00000552960 TBC1D32Q96NH3 1257 aa15.65■□□□□ 0.1
HDAC7-230ENST00000552960 RWDD1Q9H446 243 aaPredicted RBP15.65■□□□□ 0.1
HDAC7-230ENST00000552960 ANKRD36BQ8N2N9 1353 aa15.65■□□□□ 0.1
HDAC7-230ENST00000552960 ROBO2Q9HCK4 1378 aa15.65■□□□□ 0.1
HDAC7-230ENST00000552960 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
HDAC7-230ENST00000552960 RBM33Q96EV2 1170 aaKnown RBP15.65■□□□□ 0.1
HDAC7-230ENST00000552960 CD163L1Q9NR16 1453 aa15.65■□□□□ 0.1
HDAC7-230ENST00000552960 VSIG10Q8N0Z9 540 aa15.64■□□□□ 0.09
HDAC7-230ENST00000552960 ADAMTS13Q76LX8 1427 aa15.64■□□□□ 0.09
HDAC7-230ENST00000552960 XRCC6P12956 609 aaKnown RBP eCLIP15.64■□□□□ 0.096e-6■■■■■ 31.4
HDAC7-230ENST00000552960 ANTXR1Q9H6X2 564 aa15.64■□□□□ 0.09
HDAC7-230ENST00000552960 ZRANB1Q9UGI0 708 aa15.64■□□□□ 0.09
HDAC7-230ENST00000552960 ABCC11Q96J66 1382 aa15.64■□□□□ 0.09
HDAC7-230ENST00000552960 FYB1O15117 783 aa15.63■□□□□ 0.09
HDAC7-230ENST00000552960 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
HDAC7-230ENST00000552960 MCM4P33991 863 aa15.62■□□□□ 0.09
HDAC7-230ENST00000552960 C22orf23Q9BZE7 217 aa15.62■□□□□ 0.09
HDAC7-230ENST00000552960 FER1L4A9Z1Z3 1794 aa15.62■□□□□ 0.09
HDAC7-230ENST00000552960 WASLO00401 505 aaPredicted RBP15.61■□□□□ 0.09
HDAC7-230ENST00000552960 U2AF1L5P0DN76 240 aaPredicted RBP15.61■□□□□ 0.09
HDAC7-230ENST00000552960 U2AF1Q01081 240 aaKnown RBP eCLIP15.61■□□□□ 0.09
HDAC7-230ENST00000552960 RUNDC1Q96C34 613 aa15.61■□□□□ 0.09
HDAC7-230ENST00000552960 PKNOX2Q96KN3 472 aa15.61■□□□□ 0.09
HDAC7-230ENST00000552960 PNNQ9H307 717 aaKnown RBP15.61■□□□□ 0.09
HDAC7-230ENST00000552960 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
HDAC7-230ENST00000552960 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
HDAC7-230ENST00000552960 HDGFP51858 240 aaKnown RBP15.6■□□□□ 0.09
HDAC7-230ENST00000552960 TRAK2O60296 914 aa15.6■□□□□ 0.09
HDAC7-230ENST00000552960 PRR36Q9H6K5 1346 aa15.59■□□□□ 0.09
HDAC7-230ENST00000552960 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
HDAC7-230ENST00000552960 EID1Q9Y6B2 187 aa15.59■□□□□ 0.09
HDAC7-230ENST00000552960 NUDT16Q96DE0 195 aaKnown RBP15.58■□□□□ 0.09
HDAC7-230ENST00000552960 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.09
HDAC7-230ENST00000552960 AMOTL2Q9Y2J4 779 aa15.58■□□□□ 0.09
HDAC7-230ENST00000552960 ATAD2Q6PL18 1390 aa15.58■□□□□ 0.09
HDAC7-230ENST00000552960 SMC4Q9NTJ3 1288 aa15.58■□□□□ 0.08
HDAC7-230ENST00000552960 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
HDAC7-230ENST00000552960 PUS7Q96PZ0 661 aaKnown RBP15.58■□□□□ 0.08
HDAC7-230ENST00000552960 NLRP1Q9C000 1473 aa15.57■□□□□ 0.08
HDAC7-230ENST00000552960 U2SURPO15042 1029 aaKnown RBP15.57■□□□□ 0.08
HDAC7-230ENST00000552960 HSCBQ8IWL3 235 aa15.57■□□□□ 0.08
HDAC7-230ENST00000552960 GLIPR1L2Q4G1C9 344 aa15.57■□□□□ 0.08
HDAC7-230ENST00000552960 NME9Q86XW9 330 aa15.57■□□□□ 0.08
HDAC7-230ENST00000552960 CHMP5Q9NZZ3 219 aa15.57■□□□□ 0.08
HDAC7-230ENST00000552960 DZIP1LQ8IYY4 767 aaKnown RBP15.56■□□□□ 0.08
HDAC7-230ENST00000552960 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
HDAC7-230ENST00000552960 PLEKHG1Q9ULL1 1385 aa15.56■□□□□ 0.08
HDAC7-230ENST00000552960 ZKSCAN2Q63HK3 967 aa15.56■□□□□ 0.08
HDAC7-230ENST00000552960 HSP90AA1P07900 732 aaKnown RBP15.56■□□□□ 0.08
HDAC7-230ENST00000552960 HDGFL2Q7Z4V5 671 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-230ENST00000552960 THEMISQ8N1K5 641 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-230ENST00000552960 CFAP53Q96M91 514 aa15.56■□□□□ 0.08
HDAC7-230ENST00000552960 MVPQ14764 893 aaKnown RBP15.55■□□□□ 0.08
HDAC7-230ENST00000552960 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
HDAC7-230ENST00000552960 NINLQ9Y2I6 1382 aa15.55■□□□□ 0.08
HDAC7-230ENST00000552960 SOX12O15370 315 aa15.55■□□□□ 0.08
HDAC7-230ENST00000552960 MYH16Q9H6N6 1097 aa15.55■□□□□ 0.08
HDAC7-230ENST00000552960 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
HDAC7-230ENST00000552960 DLC1Q96QB1 1528 aa15.54■□□□□ 0.08
HDAC7-230ENST00000552960 POLR3AO14802 1390 aaPredicted RBP15.53■□□□□ 0.08
HDAC7-230ENST00000552960 KCNA6P17658 529 aa15.53■□□□□ 0.08
HDAC7-230ENST00000552960 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
HDAC7-230ENST00000552960 HSP90AA2PQ14568 343 aaPredicted RBP15.52■□□□□ 0.08
HDAC7-230ENST00000552960 LNPKQ9C0E8 428 aa15.52■□□□□ 0.08
HDAC7-230ENST00000552960 WDR63Q8IWG1 891 aa15.52■□□□□ 0.07
HDAC7-230ENST00000552960 HSP90AB1P08238 724 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms