RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 ABCC2Q92887 1545 aa9.07□□□□□ -0.96
SMARCC2-213ENST00000552627 DIXDC1Q155Q3 683 aa9.07□□□□□ -0.96
SMARCC2-213ENST00000552627 RNF19BQ6ZMZ0 732 aa9.07□□□□□ -0.96
SMARCC2-213ENST00000552627 UACAQ9BZF9 1416 aa9.06□□□□□ -0.96
SMARCC2-213ENST00000552627 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
SMARCC2-213ENST00000552627 GUCA2AQ02747 115 aa9.06□□□□□ -0.96
SMARCC2-213ENST00000552627 TBC1D2Q9BYX2 928 aa9.06□□□□□ -0.96
SMARCC2-213ENST00000552627 ABCA8O94911 1581 aa9.06□□□□□ -0.96
SMARCC2-213ENST00000552627 EFCAB5A4FU69 1503 aa9.05□□□□□ -0.96
SMARCC2-213ENST00000552627 ZCCHC11Q5TAX3 1644 aaKnown RBP9.05□□□□□ -0.96
SMARCC2-213ENST00000552627 FDX1P10109 184 aa9.05□□□□□ -0.96
SMARCC2-213ENST00000552627 FAM160A2Q8N612 972 aaPredicted RBP9.05□□□□□ -0.96
SMARCC2-213ENST00000552627 KIF13AQ9H1H9 1805 aa9.05□□□□□ -0.96
SMARCC2-213ENST00000552627 UHRF1BP1LA0JNW5 1464 aa9.04□□□□□ -0.96
SMARCC2-213ENST00000552627 MOXD2PA6NHM9 499 aa9.04□□□□□ -0.96
SMARCC2-213ENST00000552627 ARID3CA6NKF2 412 aa9.04□□□□□ -0.96
SMARCC2-213ENST00000552627 NDUFV2P19404 249 aa9.04□□□□□ -0.96
SMARCC2-213ENST00000552627 KDM4CQ9H3R0 1056 aa9.04□□□□□ -0.96
SMARCC2-213ENST00000552627 GPBP1L1Q9HC44 474 aaPredicted RBP9.04□□□□□ -0.96
SMARCC2-213ENST00000552627 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
SMARCC2-213ENST00000552627 RAPGEF6Q8TEU7 1601 aa9.03□□□□□ -0.96
SMARCC2-213ENST00000552627 PPEF1O14829 653 aaPredicted RBP9.03□□□□□ -0.96
SMARCC2-213ENST00000552627 USB1Q9BQ65 265 aaKnown RBP9.03□□□□□ -0.96
SMARCC2-213ENST00000552627 MAPKBP1O60336 1514 aa9.03□□□□□ -0.96
SMARCC2-213ENST00000552627 MSS51Q4VC12 460 aa9.02□□□□□ -0.97
SMARCC2-213ENST00000552627 ANKLE1Q8NAG6 615 aa9.02□□□□□ -0.97
SMARCC2-213ENST00000552627 PCDHGC3Q9UN70 934 aa9.02□□□□□ -0.97
SMARCC2-213ENST00000552627 KDM5BQ9UGL1 1544 aa9.01□□□□□ -0.97
SMARCC2-213ENST00000552627 SYMPKQ92797 1274 aaKnown RBP9.01□□□□□ -0.97
SMARCC2-213ENST00000552627 PRKD2Q9BZL6 878 aa9.01□□□□□ -0.97
SMARCC2-213ENST00000552627 DIP2BQ9P265 1576 aa9.01□□□□□ -0.97
SMARCC2-213ENST00000552627 ASXL2Q76L83 1435 aa9□□□□□ -0.97
SMARCC2-213ENST00000552627 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
SMARCC2-213ENST00000552627 C6orf229H3BNL8 230 aa9□□□□□ -0.97
SMARCC2-213ENST00000552627 GJA5P36382 358 aa9□□□□□ -0.97
SMARCC2-213ENST00000552627 PRDM9Q9NQV7 894 aa9□□□□□ -0.97
SMARCC2-213ENST00000552627 SPTLC1O15269 473 aa8.99□□□□□ -0.97
SMARCC2-213ENST00000552627 RSBN1LQ6PCB5 846 aaPredicted RBP8.99□□□□□ -0.97
SMARCC2-213ENST00000552627 RIC3Q7Z5B4 369 aa8.99□□□□□ -0.97
SMARCC2-213ENST00000552627 RSPH6AQ9H0K4 717 aa8.99□□□□□ -0.97
SMARCC2-213ENST00000552627 V9GY48 417 aaPredicted RBP8.99□□□□□ -0.97
SMARCC2-213ENST00000552627 NUP153P49790 1475 aaKnown RBP8.98□□□□□ -0.97
SMARCC2-213ENST00000552627 ABCC10Q5T3U5 1492 aa8.98□□□□□ -0.97
SMARCC2-213ENST00000552627 LRRIQ1Q96JM4 1722 aa8.98□□□□□ -0.97
SMARCC2-213ENST00000552627 NEUROD2Q15784 382 aa8.98□□□□□ -0.97
SMARCC2-213ENST00000552627 MYSM1Q5VVJ2 828 aa8.98□□□□□ -0.97
SMARCC2-213ENST00000552627 RETREG3Q86VR2 466 aa8.98□□□□□ -0.97
SMARCC2-213ENST00000552627 TSPOAP1O95153 1857 aa8.98□□□□□ -0.97
SMARCC2-213ENST00000552627 CLIP1P30622 1438 aa8.97□□□□□ -0.97
SMARCC2-213ENST00000552627 MMP16P51512 607 aa8.97□□□□□ -0.97
SMARCC2-213ENST00000552627 DDRGK1Q96HY6 314 aa8.97□□□□□ -0.97
SMARCC2-213ENST00000552627 FAM117AQ9C073 453 aa8.97□□□□□ -0.97
SMARCC2-213ENST00000552627 FCF1Q9Y324 198 aaKnown RBP8.97□□□□□ -0.97
SMARCC2-213ENST00000552627 PCF11O94913 1555 aaKnown RBP8.97□□□□□ -0.97
SMARCC2-213ENST00000552627 ATP10BO94823 1461 aa8.96□□□□□ -0.97
SMARCC2-213ENST00000552627 CDK13Q14004 1512 aaKnown RBP8.96□□□□□ -0.97
SMARCC2-213ENST00000552627 SLC19A1P41440 591 aa8.96□□□□□ -0.98
SMARCC2-213ENST00000552627 FAM69CQ0P6D2 419 aa8.96□□□□□ -0.98
SMARCC2-213ENST00000552627 MTMR2Q13614 643 aa8.96□□□□□ -0.98
SMARCC2-213ENST00000552627 PCDHB15Q9Y5E8 787 aa8.96□□□□□ -0.98
SMARCC2-213ENST00000552627 WDR7Q9Y4E6 1490 aa8.96□□□□□ -0.98
SMARCC2-213ENST00000552627 HECW1Q76N89 1606 aa8.95□□□□□ -0.98
SMARCC2-213ENST00000552627 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
SMARCC2-213ENST00000552627 DXOO77932 396 aaKnown RBP8.95□□□□□ -0.98
SMARCC2-213ENST00000552627 PRKCSHP14314 528 aaPredicted RBP8.95□□□□□ -0.98
SMARCC2-213ENST00000552627 CEP162Q5TB80 1403 aa8.95□□□□□ -0.98
SMARCC2-213ENST00000552627 EPRSP07814 1512 aaKnown RBP8.95□□□□□ -0.98
SMARCC2-213ENST00000552627 CSPP1Q1MSJ5 1256 aa8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 PLA2G2CQ5R387 149 aa8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 LIAT1Q6ZQX7 453 aa8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 EMID1Q96A84 441 aaPredicted RBP8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 POLR3EQ9NVU0 708 aa8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 LIMD1Q9UGP4 676 aa8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 ATP1B4Q9UN42 357 aaPredicted RBP8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 FMN1Q68DA7 1419 aa8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 PPRC1Q5VV67 1664 aaKnown RBP8.94□□□□□ -0.98
SMARCC2-213ENST00000552627 JUNDP17535 347 aa8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 CLK2P49760 499 aaKnown RBP8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 BRPF1P55201 1214 aaPredicted RBP8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 PRPF38BQ5VTL8 546 aaKnown RBP8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 PRR7Q8TB68 274 aa8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 ZBTB3Q9H5J0 574 aa8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 GLI2P10070 1586 aa8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 MAP3K4Q9Y6R4 1608 aa8.93□□□□□ -0.98
SMARCC2-213ENST00000552627 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
SMARCC2-213ENST00000552627 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
SMARCC2-213ENST00000552627 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 HRCP23327 699 aa8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 SKIV2LQ15477 1246 aaKnown RBP8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 SPRYD7Q5W111 196 aa8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 CABLES1Q8TDN4 633 aa8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 IRX2Q9BZI1 471 aaPredicted RBP8.91□□□□□ -0.98
SMARCC2-213ENST00000552627 CASKIN1Q8WXD9 1431 aa8.9□□□□□ -0.98
SMARCC2-213ENST00000552627 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
SMARCC2-213ENST00000552627 RPIAP49247 311 aa8.9□□□□□ -0.98
SMARCC2-213ENST00000552627 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
SMARCC2-213ENST00000552627 CCDC24Q8N4L8 307 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms