RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 SLAIN2Q9P270 581 aa11.84□□□□□ -0.51
AC055716.2-201ENST00000552545 NME9Q86XW9 330 aa11.84□□□□□ -0.51
AC055716.2-201ENST00000552545 KIF20BQ96Q89 1820 aa11.84□□□□□ -0.51
AC055716.2-201ENST00000552545 EDC4Q6P2E9 1401 aaKnown RBP11.83□□□□□ -0.52
AC055716.2-201ENST00000552545 FYB1O15117 783 aa11.83□□□□□ -0.52
AC055716.2-201ENST00000552545 PLEKHG5O94827 1062 aa11.82□□□□□ -0.52
AC055716.2-201ENST00000552545 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
AC055716.2-201ENST00000552545 POLR3AO14802 1390 aaPredicted RBP11.82□□□□□ -0.52
AC055716.2-201ENST00000552545 USP6P35125 1406 aa11.82□□□□□ -0.52
AC055716.2-201ENST00000552545 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
AC055716.2-201ENST00000552545 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
AC055716.2-201ENST00000552545 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
AC055716.2-201ENST00000552545 NUTM2GQ5VZR2 741 aa11.81□□□□□ -0.52
AC055716.2-201ENST00000552545 MYBBP1AQ9BQG0 1328 aaKnown RBP11.81□□□□□ -0.52
AC055716.2-201ENST00000552545 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
AC055716.2-201ENST00000552545 KRT28Q7Z3Y7 464 aa11.8□□□□□ -0.52
AC055716.2-201ENST00000552545 KIF1AQ12756 1690 aa11.8□□□□□ -0.52
AC055716.2-201ENST00000552545 CCDC184Q52MB2 194 aa11.8□□□□□ -0.52
AC055716.2-201ENST00000552545 ABTB2Q8N961 1025 aa11.8□□□□□ -0.52
AC055716.2-201ENST00000552545 MRS2Q9HD23 443 aa11.8□□□□□ -0.52
AC055716.2-201ENST00000552545 NPC1L1Q9UHC9 1359 aa11.8□□□□□ -0.52
AC055716.2-201ENST00000552545 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 SOX12O15370 315 aa11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 BRINP3Q76B58 766 aa11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 COG3Q96JB2 828 aa11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 NSD2O96028 1365 aa11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 NRKQ7Z2Y5 1582 aa11.79□□□□□ -0.52
AC055716.2-201ENST00000552545 ANKRD26Q9UPS8 1709 aa11.78□□□□□ -0.52
AC055716.2-201ENST00000552545 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
AC055716.2-201ENST00000552545 FBLN1P23142 703 aa11.78□□□□□ -0.52
AC055716.2-201ENST00000552545 NLRP6P59044 892 aa11.78□□□□□ -0.52
AC055716.2-201ENST00000552545 PIP4K2BP78356 416 aa11.78□□□□□ -0.52
AC055716.2-201ENST00000552545 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
AC055716.2-201ENST00000552545 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
AC055716.2-201ENST00000552545 NLRP13Q86W25 1043 aa11.77□□□□□ -0.53
AC055716.2-201ENST00000552545 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
AC055716.2-201ENST00000552545 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
AC055716.2-201ENST00000552545 TOM1O60784 492 aa11.76□□□□□ -0.53
AC055716.2-201ENST00000552545 FAM9BQ8IZU0 186 aa11.76□□□□□ -0.53
AC055716.2-201ENST00000552545 SSH2Q76I76 1423 aa11.76□□□□□ -0.53
AC055716.2-201ENST00000552545 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
AC055716.2-201ENST00000552545 PIK3C2AO00443 1686 aa11.75□□□□□ -0.53
AC055716.2-201ENST00000552545 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
AC055716.2-201ENST00000552545 MTHFSP49914 203 aa11.74□□□□□ -0.53
AC055716.2-201ENST00000552545 ROBO1Q9Y6N7 1651 aa11.74□□□□□ -0.53
AC055716.2-201ENST00000552545 BRD4O60885 1362 aaPredicted RBP11.73□□□□□ -0.53
AC055716.2-201ENST00000552545 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
AC055716.2-201ENST00000552545 RRS1Q15050 365 aaKnown RBP11.73□□□□□ -0.53
AC055716.2-201ENST00000552545 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
AC055716.2-201ENST00000552545 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.54
AC055716.2-201ENST00000552545 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.54
AC055716.2-201ENST00000552545 CFAP53Q96M91 514 aa11.71□□□□□ -0.54
AC055716.2-201ENST00000552545 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.54
AC055716.2-201ENST00000552545 PXDNQ92626 1479 aa11.71□□□□□ -0.54
AC055716.2-201ENST00000552545 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
AC055716.2-201ENST00000552545 POLKQ9UBT6 870 aa11.7□□□□□ -0.54
AC055716.2-201ENST00000552545 CABLES1Q8TDN4 633 aa11.7□□□□□ -0.54
AC055716.2-201ENST00000552545 USP31Q70CQ4 1352 aa11.7□□□□□ -0.54
AC055716.2-201ENST00000552545 NHSL1Q5SYE7 1610 aa11.7□□□□□ -0.54
AC055716.2-201ENST00000552545 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
AC055716.2-201ENST00000552545 SPATA31A3Q5VYP0 1347 aa11.69□□□□□ -0.54
AC055716.2-201ENST00000552545 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
AC055716.2-201ENST00000552545 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
AC055716.2-201ENST00000552545 WDR43Q15061 677 aaKnown RBP eCLIP11.69□□□□□ -0.54
AC055716.2-201ENST00000552545 SOS2Q07890 1332 aaPredicted RBP11.69□□□□□ -0.54
AC055716.2-201ENST00000552545 ALS2Q96Q42 1657 aa11.69□□□□□ -0.54
AC055716.2-201ENST00000552545 AMPHP49418 695 aa11.68□□□□□ -0.54
AC055716.2-201ENST00000552545 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
AC055716.2-201ENST00000552545 PNISRQ8TF01 805 aaKnown RBP11.68□□□□□ -0.54
AC055716.2-201ENST00000552545 PHLPP1O60346 1717 aa11.67□□□□□ -0.54
AC055716.2-201ENST00000552545 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
AC055716.2-201ENST00000552545 GCP02774 474 aa11.67□□□□□ -0.54
AC055716.2-201ENST00000552545 ZC3H6P61129 1189 aaKnown RBP11.67□□□□□ -0.54
AC055716.2-201ENST00000552545 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
AC055716.2-201ENST00000552545 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
AC055716.2-201ENST00000552545 AATKQ6ZMQ8 1374 aa11.67□□□□□ -0.54
AC055716.2-201ENST00000552545 MAP3K19Q56UN5 1328 aa11.66□□□□□ -0.54
AC055716.2-201ENST00000552545 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
AC055716.2-201ENST00000552545 LRRC59Q96AG4 307 aaKnown RBP11.66□□□□□ -0.54
AC055716.2-201ENST00000552545 LTN1O94822 1766 aa11.66□□□□□ -0.54
AC055716.2-201ENST00000552545 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
AC055716.2-201ENST00000552545 USP54Q70EL1 1684 aa11.65□□□□□ -0.54
AC055716.2-201ENST00000552545 DIAPH1O60610 1272 aaKnown RBP11.65□□□□□ -0.54
AC055716.2-201ENST00000552545 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.55
AC055716.2-201ENST00000552545 KCNA4P22459 653 aa11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 HSP90AB2PQ58FF8 381 aa11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 LTV1Q96GA3 475 aaPredicted RBP11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 AHDC1Q5TGY3 1603 aaPredicted RBP11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 MED1Q15648 1581 aaPredicted RBP11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 U2AF1L5P0DN76 240 aaPredicted RBP11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 U2AF1Q01081 240 aaKnown RBP eCLIP11.64□□□□□ -0.55
AC055716.2-201ENST00000552545 USP19O94966 1318 aa11.63□□□□□ -0.55
AC055716.2-201ENST00000552545 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
AC055716.2-201ENST00000552545 PHRF1Q9P1Y6 1649 aaKnown RBP11.63□□□□□ -0.55
AC055716.2-201ENST00000552545 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
AC055716.2-201ENST00000552545 SLIT3O75094 1523 aa11.62□□□□□ -0.55
AC055716.2-201ENST00000552545 HOXC9P31274 260 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms