RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 GNEQ9Y223 722 aaKnown RBP6.92□□□□□ -1.3
LSM6P2-201ENST00000552208 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
LSM6P2-201ENST00000552208 ACTN4O43707 911 aaKnown RBP6.91□□□□□ -1.3
LSM6P2-201ENST00000552208 FBXO45P0C2W1 286 aa6.91□□□□□ -1.3
LSM6P2-201ENST00000552208 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.3
LSM6P2-201ENST00000552208 Q3C1V9 767 aa6.9□□□□□ -1.3
LSM6P2-201ENST00000552208 KMT5BQ4FZB7 885 aa6.9□□□□□ -1.3
LSM6P2-201ENST00000552208 NBPF3Q9H094 633 aa6.9□□□□□ -1.3
LSM6P2-201ENST00000552208 SALL2Q9Y467 1007 aaPredicted RBP6.9□□□□□ -1.3
LSM6P2-201ENST00000552208 ZBBXA8MT70 800 aa6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 PIK3CDO00329 1044 aa6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 RGS20O76081 388 aa6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 F12P00748 615 aaPredicted RBP6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 LSM11P83369 360 aaKnown RBP eCLIP6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 PUS10Q3MIT2 529 aaKnown RBP6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 ZFRQ96KR1 1074 aaKnown RBP6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 ZMIZ1Q9ULJ6 1067 aa6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 AMOTL2Q9Y2J4 779 aa6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 AXIN2Q9Y2T1 843 aa6.89□□□□□ -1.31
LSM6P2-201ENST00000552208 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
LSM6P2-201ENST00000552208 BRICD5Q6PL45 260 aa6.88□□□□□ -1.31
LSM6P2-201ENST00000552208 PLEKHM2Q8IWE5 1019 aa6.88□□□□□ -1.31
LSM6P2-201ENST00000552208 FKBPLQ9UIM3 349 aa6.88□□□□□ -1.31
LSM6P2-201ENST00000552208 ZC3H4Q9UPT8 1303 aaKnown RBP6.87□□□□□ -1.31
LSM6P2-201ENST00000552208 RBM25P49756 843 aaKnown RBP6.87□□□□□ -1.31
LSM6P2-201ENST00000552208 TMEM164Q5U3C3 297 aa6.87□□□□□ -1.31
LSM6P2-201ENST00000552208 PHLDB3Q6NSJ2 640 aa6.87□□□□□ -1.31
LSM6P2-201ENST00000552208 BLOC1S3Q6QNY0 202 aa6.87□□□□□ -1.31
LSM6P2-201ENST00000552208 RNF19BQ6ZMZ0 732 aa6.87□□□□□ -1.31
LSM6P2-201ENST00000552208 TXNDC2Q86VQ3 553 aa6.87□□□□□ -1.31
LSM6P2-201ENST00000552208 STK32AQ8WU08 396 aa6.86□□□□□ -1.31
LSM6P2-201ENST00000552208 THAP11Q96EK4 314 aa6.86□□□□□ -1.31
LSM6P2-201ENST00000552208 USB1Q9BQ65 265 aaKnown RBP6.86□□□□□ -1.31
LSM6P2-201ENST00000552208 USP17L3A6NCW0 530 aa6.85□□□□□ -1.31
LSM6P2-201ENST00000552208 USP17L4A6NCW7 530 aa6.85□□□□□ -1.31
LSM6P2-201ENST00000552208 USP17L2Q6R6M4 530 aa6.85□□□□□ -1.31
LSM6P2-201ENST00000552208 USP17L1Q7RTZ2 530 aa6.85□□□□□ -1.31
LSM6P2-201ENST00000552208 FAM174AQ8TBP5 190 aa6.85□□□□□ -1.31
LSM6P2-201ENST00000552208 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
LSM6P2-201ENST00000552208 FAM196BA6NMK8 535 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 USP17L5A8MUK1 530 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 RNF40O75150 1001 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 PTPRNQ16849 979 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 B4GALNT3Q6L9W6 998 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 PHTF2Q8N3S3 785 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 OCSTAMPQ9BR26 566 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 MAP10Q9P2G4 905 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 CHIC2Q9UKJ5 165 aa6.84□□□□□ -1.31
LSM6P2-201ENST00000552208 SSFA2P28290 1259 aa6.83□□□□□ -1.32
LSM6P2-201ENST00000552208 SCUBE3Q8IX30 993 aa6.83□□□□□ -1.32
LSM6P2-201ENST00000552208 PRR14Q9BWN1 585 aa6.83□□□□□ -1.32
LSM6P2-201ENST00000552208 NOVA2Q9UNW9 492 aaKnown RBP6.83□□□□□ -1.32
LSM6P2-201ENST00000552208 GPSM3Q9Y4H4 160 aa6.83□□□□□ -1.32
LSM6P2-201ENST00000552208 E9PSI1 815 aa6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 SKIP12755 728 aa6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 JUNDP17535 347 aa6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 PTK7Q13308 1070 aa6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 CRTC2Q53ET0 693 aaPredicted RBP6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 ADGRD1Q6QNK2 874 aa6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 MRPL50Q8N5N7 158 aaKnown RBP6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 LRCH3Q96II8 777 aa6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 CEP126Q9P2H0 1117 aa6.82□□□□□ -1.32
LSM6P2-201ENST00000552208 DEPDC4Q8N2C3 294 aa6.81□□□□□ -1.32
LSM6P2-201ENST00000552208 MKRN1Q9UHC7 482 aaKnown RBP6.81□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L15C9J2P7 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L10C9JJH3 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L13C9JLJ4 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L12C9JPN9 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L11C9JVI0 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L21D6R901 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L18D6R9N7 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L22D6RA61 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L17D6RBQ6 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L19D6RCP7 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L20D6RJB6 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 HRO43593 1189 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 LZTS3O60299 673 aaPredicted RBP6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 APLP1P51693 650 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 MCCD1P59942 119 aaPredicted RBP6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 USP17L24Q0WX57 530 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 PDXDC2PQ6P474 469 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 CCER1Q8TC90 406 aaPredicted RBP6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 CLP1Q92989 425 aaKnown RBP6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 EVA1BQ9NVM1 165 aa6.8□□□□□ -1.32
LSM6P2-201ENST00000552208 FMNL1O95466 1100 aaPredicted RBP6.79□□□□□ -1.32
LSM6P2-201ENST00000552208 STAC3Q96MF2 364 aa6.79□□□□□ -1.32
LSM6P2-201ENST00000552208 CDCA7Q9BWT1 371 aaPredicted RBP6.79□□□□□ -1.32
LSM6P2-201ENST00000552208 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
LSM6P2-201ENST00000552208 DXOO77932 396 aaKnown RBP6.78□□□□□ -1.32
LSM6P2-201ENST00000552208 ARID4AP29374 1257 aaPredicted RBP6.78□□□□□ -1.32
LSM6P2-201ENST00000552208 NCOA4Q13772 614 aa6.78□□□□□ -1.32
LSM6P2-201ENST00000552208 MSS51Q4VC12 460 aa6.78□□□□□ -1.32
LSM6P2-201ENST00000552208 DNAJC14Q6Y2X3 702 aaPredicted RBP6.78□□□□□ -1.32
LSM6P2-201ENST00000552208 FAM160A2Q8N612 972 aaPredicted RBP6.78□□□□□ -1.32
LSM6P2-201ENST00000552208 RBM47A0AV96 593 aaKnown RBP6.77□□□□□ -1.33
LSM6P2-201ENST00000552208 SOWAHBA6NEL2 793 aa6.77□□□□□ -1.33
LSM6P2-201ENST00000552208 NR1I2O75469 434 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms