RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 ATP7BP35670 1465 aa24.46■■□□□ 1.51
CDK4-208ENST00000551706 SRPK2P78362 688 aaKnown RBP24.46■■□□□ 1.51
CDK4-208ENST00000551706 CCDC61Q9Y6R9 512 aa24.45■■□□□ 1.5
CDK4-208ENST00000551706 BAG6P46379 1132 aa24.44■■□□□ 1.5
CDK4-208ENST00000551706 KRT27Q7Z3Y8 459 aa24.44■■□□□ 1.5
CDK4-208ENST00000551706 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
CDK4-208ENST00000551706 VPS72Q15906 364 aa24.43■■□□□ 1.5
CDK4-208ENST00000551706 PMFBP1Q8TBY8 1022 aa24.43■■□□□ 1.5
CDK4-208ENST00000551706 RGPD8O14715 1765 aaPredicted RBP24.42■■□□□ 1.5
CDK4-208ENST00000551706 ONECUT3O60422 494 aaPredicted RBP24.42■■□□□ 1.5
CDK4-208ENST00000551706 PSME1Q06323 249 aa24.42■■□□□ 1.5
CDK4-208ENST00000551706 SPATA31A3Q5VYP0 1347 aa24.41■■□□□ 1.5
CDK4-208ENST00000551706 KRT28Q7Z3Y7 464 aa24.41■■□□□ 1.5
CDK4-208ENST00000551706 CABP2Q9NPB3 220 aa24.41■■□□□ 1.5
CDK4-208ENST00000551706 USP47Q96K76 1375 aa24.41■■□□□ 1.5
CDK4-208ENST00000551706 NGDNQ8NEJ9 315 aaKnown RBP24.4■■□□□ 1.5
CDK4-208ENST00000551706 CCDC9Q9Y3X0 531 aaKnown RBP24.4■■□□□ 1.5
CDK4-208ENST00000551706 ITSN1Q15811 1721 aa24.4■■□□□ 1.5
CDK4-208ENST00000551706 ST20-MTHFSA0A0A6YYL1 179 aa24.38■■□□□ 1.49
CDK4-208ENST00000551706 HAP1P54257 671 aaPredicted RBP24.38■■□□□ 1.49
CDK4-208ENST00000551706 PLEKHG3A1L390 1219 aa24.37■■□□□ 1.49
CDK4-208ENST00000551706 SBNO1A3KN83 1393 aa24.36■■□□□ 1.49
CDK4-208ENST00000551706 PLCH1Q4KWH8 1693 aa24.35■■□□□ 1.49
CDK4-208ENST00000551706 NWD2Q9ULI1 1742 aa24.35■■□□□ 1.49
CDK4-208ENST00000551706 PPIP5K1Q6PFW1 1433 aa24.35■■□□□ 1.49
CDK4-208ENST00000551706 TOPAZ1Q8N9V7 1692 aa24.34■■□□□ 1.49
CDK4-208ENST00000551706 POLR3AO14802 1390 aaPredicted RBP24.34■■□□□ 1.49
CDK4-208ENST00000551706 TESK2Q96S53 571 aa24.34■■□□□ 1.49
CDK4-208ENST00000551706 A0A0G2JS52 829 aa24.33■■□□□ 1.49
CDK4-208ENST00000551706 MYT1Q01538 1121 aa24.33■■□□□ 1.49
CDK4-208ENST00000551706 PUS7Q96PZ0 661 aaKnown RBP24.33■■□□□ 1.49
CDK4-208ENST00000551706 TNS3Q68CZ2 1445 aa24.33■■□□□ 1.49
CDK4-208ENST00000551706 ACEP12821 1306 aa24.33■■□□□ 1.48
CDK4-208ENST00000551706 EN1Q05925 392 aaPredicted RBP24.32■■□□□ 1.48
CDK4-208ENST00000551706 R3HDM1Q15032 1099 aaKnown RBP24.32■■□□□ 1.48
CDK4-208ENST00000551706 CABLES1Q8TDN4 633 aa24.31■■□□□ 1.48
CDK4-208ENST00000551706 ARHGEF10O15013 1369 aa24.3■■□□□ 1.48
CDK4-208ENST00000551706 CABP1Q9NZU7 370 aa24.3■■□□□ 1.48
CDK4-208ENST00000551706 RGPD1P0DJD0 1748 aa24.28■■□□□ 1.48
CDK4-208ENST00000551706 PLEKHG5O94827 1062 aa24.28■■□□□ 1.48
CDK4-208ENST00000551706 TMF1P82094 1093 aa24.28■■□□□ 1.48
CDK4-208ENST00000551706 YY1P25490 414 aa24.27■■□□□ 1.48
CDK4-208ENST00000551706 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.47
CDK4-208ENST00000551706 FAM98CQ17RN3 349 aaKnown RBP24.26■■□□□ 1.47
CDK4-208ENST00000551706 LMOD2Q6P5Q4 547 aa24.26■■□□□ 1.47
CDK4-208ENST00000551706 BRD4O60885 1362 aaPredicted RBP24.26■■□□□ 1.47
CDK4-208ENST00000551706 PAK3O75914 559 aaPredicted RBP24.25■■□□□ 1.47
CDK4-208ENST00000551706 CDCA8Q53HL2 280 aa24.24■■□□□ 1.47
CDK4-208ENST00000551706 ZNF692Q9BU19 519 aaPredicted RBP24.24■■□□□ 1.47
CDK4-208ENST00000551706 TRPM3Q9HCF6 1732 aaPredicted RBP24.24■■□□□ 1.47
CDK4-208ENST00000551706 FAM83GA6ND36 823 aa24.23■■□□□ 1.47
CDK4-208ENST00000551706 ABCA3Q99758 1704 aa24.23■■□□□ 1.47
CDK4-208ENST00000551706 DISP2A7MBM2 1401 aa24.22■■□□□ 1.47
CDK4-208ENST00000551706 NINLQ9Y2I6 1382 aa24.21■■□□□ 1.47
CDK4-208ENST00000551706 FAM182BQ5T319 152 aa24.21■■□□□ 1.47
CDK4-208ENST00000551706 USP6P35125 1406 aa24.2■■□□□ 1.46
CDK4-208ENST00000551706 TMC1Q8TDI8 760 aa24.2■■□□□ 1.46
CDK4-208ENST00000551706 NRAPQ86VF7 1730 aa24.19■■□□□ 1.46
CDK4-208ENST00000551706 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
CDK4-208ENST00000551706 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
CDK4-208ENST00000551706 ALS2Q96Q42 1657 aa24.18■■□□□ 1.46
CDK4-208ENST00000551706 HSPA5P11021 654 aaKnown RBP24.18■■□□□ 1.46
CDK4-208ENST00000551706 BTG4Q9NY30 223 aa24.18■■□□□ 1.46
CDK4-208ENST00000551706 TNS1Q9HBL0 1735 aaKnown RBP24.18■■□□□ 1.46
CDK4-208ENST00000551706 TERF2IPQ9NYB0 399 aa24.17■■□□□ 1.46
CDK4-208ENST00000551706 HDGFL2Q7Z4V5 671 aaPredicted RBP24.16■■□□□ 1.46
CDK4-208ENST00000551706 ABTB2Q8N961 1025 aa24.16■■□□□ 1.46
CDK4-208ENST00000551706 SLC12A5Q9H2X9 1139 aa24.15■■□□□ 1.46
CDK4-208ENST00000551706 KTN1Q86UP2 1357 aaKnown RBP24.15■■□□□ 1.46
CDK4-208ENST00000551706 SSH2Q76I76 1423 aa24.14■■□□□ 1.45
CDK4-208ENST00000551706 CAMKK2Q96RR4 588 aa24.13■■□□□ 1.45
CDK4-208ENST00000551706 TTC21AQ8NDW8 1320 aa24.12■■□□□ 1.45
CDK4-208ENST00000551706 SPATA31A5Q5VU36 1347 aa24.11■■□□□ 1.45
CDK4-208ENST00000551706 TTC21BQ7Z4L5 1316 aa24.11■■□□□ 1.45
CDK4-208ENST00000551706 SPATA31A7Q8IWB4 1347 aa24.11■■□□□ 1.45
CDK4-208ENST00000551706 COL14A1Q05707 1796 aaKnown RBP24.11■■□□□ 1.45
CDK4-208ENST00000551706 NLRP13Q86W25 1043 aa24.11■■□□□ 1.45
CDK4-208ENST00000551706 CD163L1Q9NR16 1453 aa24.11■■□□□ 1.45
CDK4-208ENST00000551706 AKAP12Q02952 1782 aa24.11■■□□□ 1.45
CDK4-208ENST00000551706 THSD7AQ9UPZ6 1657 aa24.1■■□□□ 1.45
CDK4-208ENST00000551706 A0A1W2PP64 1363 aa24.09■■□□□ 1.45
CDK4-208ENST00000551706 PARD3Q8TEW0 1356 aa24.08■■□□□ 1.45
CDK4-208ENST00000551706 TRIM37O94972 964 aa24.08■■□□□ 1.45
CDK4-208ENST00000551706 NUTM2GQ5VZR2 741 aa24.08■■□□□ 1.45
CDK4-208ENST00000551706 ANKRD36BQ8N2N9 1353 aa24.07■■□□□ 1.44
CDK4-208ENST00000551706 EDC4Q6P2E9 1401 aaKnown RBP24.07■■□□□ 1.44
CDK4-208ENST00000551706 USP19O94966 1318 aa24.07■■□□□ 1.44
CDK4-208ENST00000551706 DCAF8L1A6NGE4 600 aa24.06■■□□□ 1.44
CDK4-208ENST00000551706 APBA3O96018 575 aa24.06■■□□□ 1.44
CDK4-208ENST00000551706 NLRP6P59044 892 aa24.06■■□□□ 1.44
CDK4-208ENST00000551706 FAM196AQ6ZSG2 479 aa24.06■■□□□ 1.44
CDK4-208ENST00000551706 MON2Q7Z3U7 1717 aa24.06■■□□□ 1.44
CDK4-208ENST00000551706 NRKQ7Z2Y5 1582 aa24.04■■□□□ 1.44
CDK4-208ENST00000551706 PPP1R1BQ9UD71 204 aaPredicted RBP24.03■■□□□ 1.44
CDK4-208ENST00000551706 CRYBG1Q9Y4K1 1723 aa24.02■■□□□ 1.44
CDK4-208ENST00000551706 NBPF14Q5TI25 921 aa24.02■■□□□ 1.44
CDK4-208ENST00000551706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.02■■□□□ 1.44
CDK4-208ENST00000551706 POLR3GLQ9BT43 218 aa24.01■■□□□ 1.43
CDK4-208ENST00000551706 PIK3C2AO00443 1686 aa24.01■■□□□ 1.43
CDK4-208ENST00000551706 RREB1Q92766 1687 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms