RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CFAP53Q96M91 514 aa26.16■■□□□ 1.78
SSH1-209ENST00000551165 ZNF692Q9BU19 519 aaPredicted RBP26.15■■□□□ 1.78
SSH1-209ENST00000551165 KDM4FA0A1W2PPD8 638 aa26.13■■□□□ 1.77
SSH1-209ENST00000551165 COL3A1P02461 1466 aaPredicted RBP26.12■■□□□ 1.77
SSH1-209ENST00000551165 NALCNQ8IZF0 1738 aa26.12■■□□□ 1.77
SSH1-209ENST00000551165 POLKQ9UBT6 870 aa26.11■■□□□ 1.77
SSH1-209ENST00000551165 TTC21BQ7Z4L5 1316 aa26.11■■□□□ 1.77
SSH1-209ENST00000551165 PDE3BQ13370 1112 aa26.11■■□□□ 1.77
SSH1-209ENST00000551165 USP6P35125 1406 aa26.1■■□□□ 1.77
SSH1-209ENST00000551165 HSPA2P54652 639 aa26.1■■□□□ 1.77
SSH1-209ENST00000551165 NRKQ7Z2Y5 1582 aa26.1■■□□□ 1.77
SSH1-209ENST00000551165 ZNF521Q96K83 1311 aa26.1■■□□□ 1.77
SSH1-209ENST00000551165 PPM1GO15355 546 aaPredicted RBP26.1■■□□□ 1.77
SSH1-209ENST00000551165 U2AF1L5P0DN76 240 aaPredicted RBP26.08■■□□□ 1.77
SSH1-209ENST00000551165 U2AF1Q01081 240 aaKnown RBP eCLIP26.08■■□□□ 1.77
SSH1-209ENST00000551165 EMILIN1Q9Y6C2 1016 aa26.08■■□□□ 1.77
SSH1-209ENST00000551165 COG3Q96JB2 828 aa26.07■■□□□ 1.76
SSH1-209ENST00000551165 FMN2Q9NZ56 1722 aa26.07■■□□□ 1.76
SSH1-209ENST00000551165 MAP2P11137 1827 aaKnown RBP26.07■■□□□ 1.76
SSH1-209ENST00000551165 PNPLA6Q8IY17 1366 aa26.06■■□□□ 1.76
SSH1-209ENST00000551165 NGDNQ8NEJ9 315 aaKnown RBP26.06■■□□□ 1.76
SSH1-209ENST00000551165 SSH2Q76I76 1423 aa26.05■■□□□ 1.76
SSH1-209ENST00000551165 U2SURPO15042 1029 aaKnown RBP26.05■■□□□ 1.76
SSH1-209ENST00000551165 RRP7AQ9Y3A4 280 aaKnown RBP26.05■■□□□ 1.76
SSH1-209ENST00000551165 RRS1Q15050 365 aaKnown RBP26.04■■□□□ 1.76
SSH1-209ENST00000551165 RUNDC1Q96C34 613 aa26.04■■□□□ 1.76
SSH1-209ENST00000551165 DMRT2Q9Y5R5 561 aa26.04■■□□□ 1.76
SSH1-209ENST00000551165 ANKARQ7Z5J8 1434 aa26.03■■□□□ 1.76
SSH1-209ENST00000551165 NEUROD2Q15784 382 aa26.03■■□□□ 1.76
SSH1-209ENST00000551165 SPINK5Q9NQ38 1064 aaPredicted RBP26.03■■□□□ 1.76
SSH1-209ENST00000551165 TCP11L2Q8N4U5 519 aa26.02■■□□□ 1.76
SSH1-209ENST00000551165 DIAPH1O60610 1272 aaKnown RBP26.01■■□□□ 1.75
SSH1-209ENST00000551165 ADGRL3Q9HAR2 1447 aa26.01■■□□□ 1.75
SSH1-209ENST00000551165 IQSEC2Q5JU85 1478 aa26■■□□□ 1.75
SSH1-209ENST00000551165 RNF123Q5XPI4 1314 aa25.99■■□□□ 1.75
SSH1-209ENST00000551165 GOLGA2Q08379 1002 aa25.99■■□□□ 1.75
SSH1-209ENST00000551165 C14orf37Q86TY3 774 aa25.99■■□□□ 1.75
SSH1-209ENST00000551165 NWD1Q149M9 1564 aa25.99■■□□□ 1.75
SSH1-209ENST00000551165 OVOS2A0A0J9YW53 1432 aa25.99■■□□□ 1.75
SSH1-209ENST00000551165 OVOS2Q6IE36 1432 aa25.99■■□□□ 1.75
SSH1-209ENST00000551165 AATKQ6ZMQ8 1374 aa25.99■■□□□ 1.75
SSH1-209ENST00000551165 DUSP27Q5VZP5 1158 aa25.98■■□□□ 1.75
SSH1-209ENST00000551165 RCAN3Q9UKA8 241 aa25.97■■□□□ 1.75
SSH1-209ENST00000551165 SOX12O15370 315 aa25.97■■□□□ 1.75
SSH1-209ENST00000551165 PROSER2Q86WR7 435 aaPredicted RBP25.97■■□□□ 1.75
SSH1-209ENST00000551165 PLEKHF1Q96S99 279 aa25.96■■□□□ 1.75
SSH1-209ENST00000551165 SLFN5Q08AF3 891 aa25.96■■□□□ 1.75
SSH1-209ENST00000551165 WWC1Q8IX03 1113 aa25.96■■□□□ 1.75
SSH1-209ENST00000551165 PHF8Q9UPP1 1060 aa25.94■■□□□ 1.74
SSH1-209ENST00000551165 TTC21AQ8NDW8 1320 aa25.93■■□□□ 1.74
SSH1-209ENST00000551165 NUTM2GQ5VZR2 741 aa25.92■■□□□ 1.74
SSH1-209ENST00000551165 STRCP1A6NGW2 1772 aa25.92■■□□□ 1.74
SSH1-209ENST00000551165 ESCO1Q5FWF5 840 aa25.92■■□□□ 1.74
SSH1-209ENST00000551165 CDK12Q9NYV4 1490 aaPredicted RBP25.92■■□□□ 1.74
SSH1-209ENST00000551165 PIK3C2AO00443 1686 aa25.92■■□□□ 1.74
SSH1-209ENST00000551165 IL13P35225 146 aa25.91■■□□□ 1.74
SSH1-209ENST00000551165 TRMT2AQ8IZ69 625 aaKnown RBP25.91■■□□□ 1.74
SSH1-209ENST00000551165 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
SSH1-209ENST00000551165 ORAI2Q96SN7 254 aa25.9■■□□□ 1.74
SSH1-209ENST00000551165 PHF23Q9BUL5 403 aaPredicted RBP25.9■■□□□ 1.74
SSH1-209ENST00000551165 USP31Q70CQ4 1352 aa25.9■■□□□ 1.74
SSH1-209ENST00000551165 HMOX1P09601 288 aa25.89■■□□□ 1.73
SSH1-209ENST00000551165 PAK3O75914 559 aaPredicted RBP25.88■■□□□ 1.73
SSH1-209ENST00000551165 NGEFQ8N5V2 710 aa25.88■■□□□ 1.73
SSH1-209ENST00000551165 RRP1P56182 461 aaKnown RBP25.87■■□□□ 1.73
SSH1-209ENST00000551165 NLRP6P59044 892 aa25.87■■□□□ 1.73
SSH1-209ENST00000551165 RSPH6AQ9H0K4 717 aa25.87■■□□□ 1.73
SSH1-209ENST00000551165 PEAK1Q9H792 1746 aa25.86■■□□□ 1.73
SSH1-209ENST00000551165 LRRC7Q96NW7 1537 aa25.86■■□□□ 1.73
SSH1-209ENST00000551165 E9PSI1 815 aa25.84■■□□□ 1.73
SSH1-209ENST00000551165 PRKAR2BP31323 418 aa25.84■■□□□ 1.73
SSH1-209ENST00000551165 TMPOP42166 694 aaKnown RBP25.84■■□□□ 1.73
SSH1-209ENST00000551165 HSP90AB2PQ58FF8 381 aa25.84■■□□□ 1.73
SSH1-209ENST00000551165 ABTB2Q8N961 1025 aa25.84■■□□□ 1.73
SSH1-209ENST00000551165 TMEM94Q12767 1356 aa25.84■■□□□ 1.73
SSH1-209ENST00000551165 PLIN1O60240 522 aa25.83■■□□□ 1.73
SSH1-209ENST00000551165 FCHSD2O94868 740 aa25.83■■□□□ 1.73
SSH1-209ENST00000551165 MARF1Q9Y4F3 1742 aaKnown RBP25.83■■□□□ 1.73
SSH1-209ENST00000551165 MAP3K19Q56UN5 1328 aa25.83■■□□□ 1.73
SSH1-209ENST00000551165 MAPK8IP3Q9UPT6 1336 aa25.83■■□□□ 1.73
SSH1-209ENST00000551165 STRCQ7RTU9 1775 aa25.83■■□□□ 1.73
SSH1-209ENST00000551165 XPCQ01831 940 aaPredicted RBP25.82■■□□□ 1.72
SSH1-209ENST00000551165 CCDC27Q2M243 656 aa25.82■■□□□ 1.72
SSH1-209ENST00000551165 PHACTR3Q96KR7 559 aa25.82■■□□□ 1.72
SSH1-209ENST00000551165 C19orf44Q9H6X5 657 aa25.82■■□□□ 1.72
SSH1-209ENST00000551165 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
SSH1-209ENST00000551165 TRIM35Q9UPQ4 493 aa25.82■■□□□ 1.72
SSH1-209ENST00000551165 FOXO3O43524 673 aa25.81■■□□□ 1.72
SSH1-209ENST00000551165 PSME1Q06323 249 aa25.81■■□□□ 1.72
SSH1-209ENST00000551165 ERICH6BQ5W0A0 696 aa25.8■■□□□ 1.72
SSH1-209ENST00000551165 WDR63Q8IWG1 891 aa25.78■■□□□ 1.72
SSH1-209ENST00000551165 PPP4R2Q9NY27 417 aa25.78■■□□□ 1.72
SSH1-209ENST00000551165 RIPK4P57078 832 aa25.77■■□□□ 1.72
SSH1-209ENST00000551165 C1orf167Q5SNV9 1468 aa25.77■■□□□ 1.72
SSH1-209ENST00000551165 AEBP1Q8IUX7 1158 aa25.77■■□□□ 1.72
SSH1-209ENST00000551165 B4GALNT3Q6L9W6 998 aa25.75■■□□□ 1.71
SSH1-209ENST00000551165 NCBP3Q53F19 620 aaKnown RBP25.75■■□□□ 1.71
SSH1-209ENST00000551165 PNNQ9H307 717 aaKnown RBP25.75■■□□□ 1.71
SSH1-209ENST00000551165 SBNO1A3KN83 1393 aa25.72■■□□□ 1.71
SSH1-209ENST00000551165 PLEKHG5O94827 1062 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms