RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 MORN1Q5T089 497 aa9.99□□□□□ -0.81
TGFBR1-208ENST00000550253 TXNDC2Q86VQ3 553 aa9.99□□□□□ -0.81
TGFBR1-208ENST00000550253 STK32AQ8WU08 396 aa9.99□□□□□ -0.81
TGFBR1-208ENST00000550253 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
TGFBR1-208ENST00000550253 WIZO95785 1651 aa9.99□□□□□ -0.81
TGFBR1-208ENST00000550253 IGSF3O75054 1194 aa9.98□□□□□ -0.81
TGFBR1-208ENST00000550253 PHLDB3Q6NSJ2 640 aa9.98□□□□□ -0.81
TGFBR1-208ENST00000550253 WDR62O43379 1518 aa9.98□□□□□ -0.81
TGFBR1-208ENST00000550253 ZBBXA8MT70 800 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 SCUBE2Q9NQ36 999 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 SLC27A5Q9Y2P5 690 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 USP17L3A6NCW0 530 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 USP17L4A6NCW7 530 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 USP17L2Q6R6M4 530 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 POTEEQ6S8J3 1075 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 USP17L1Q7RTZ2 530 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 PLEKHM2Q8IWE5 1019 aa9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 NOVA2Q9UNW9 492 aaKnown RBP9.97□□□□□ -0.81
TGFBR1-208ENST00000550253 CADPSQ9ULU8 1353 aa9.96□□□□□ -0.81
TGFBR1-208ENST00000550253 Q3C1V9 767 aa9.96□□□□□ -0.82
TGFBR1-208ENST00000550253 ARHGAP33O14559 1287 aa9.95□□□□□ -0.82
TGFBR1-208ENST00000550253 SNPHO15079 494 aa9.95□□□□□ -0.82
TGFBR1-208ENST00000550253 PUS10Q3MIT2 529 aaKnown RBP9.95□□□□□ -0.82
TGFBR1-208ENST00000550253 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
TGFBR1-208ENST00000550253 CCER1Q8TC90 406 aaPredicted RBP9.95□□□□□ -0.82
TGFBR1-208ENST00000550253 FKBPLQ9UIM3 349 aa9.95□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L5A8MUK1 530 aa9.94□□□□□ -0.82
TGFBR1-208ENST00000550253 DMRTA1Q5VZB9 504 aa9.94□□□□□ -0.82
TGFBR1-208ENST00000550253 LAPTM4BQ86VI4 370 aa9.94□□□□□ -0.82
TGFBR1-208ENST00000550253 FAM196BA6NMK8 535 aa9.93□□□□□ -0.82
TGFBR1-208ENST00000550253 ACTN4O43707 911 aaKnown RBP9.93□□□□□ -0.82
TGFBR1-208ENST00000550253 F12P00748 615 aaPredicted RBP9.93□□□□□ -0.82
TGFBR1-208ENST00000550253 SKIP12755 728 aa9.93□□□□□ -0.82
TGFBR1-208ENST00000550253 MAMSTRQ6ZN01 415 aa9.93□□□□□ -0.82
TGFBR1-208ENST00000550253 FAM174AQ8TBP5 190 aa9.93□□□□□ -0.82
TGFBR1-208ENST00000550253 SSFA2P28290 1259 aa9.92□□□□□ -0.82
TGFBR1-208ENST00000550253 SLAIN2Q9P270 581 aa9.92□□□□□ -0.82
TGFBR1-208ENST00000550253 VPS9D1Q9Y2B5 631 aa9.92□□□□□ -0.82
TGFBR1-208ENST00000550253 UNCXA6NJT0 531 aa9.92□□□□□ -0.82
TGFBR1-208ENST00000550253 RNF40O75150 1001 aa9.92□□□□□ -0.82
TGFBR1-208ENST00000550253 CRTC2Q53ET0 693 aaPredicted RBP9.92□□□□□ -0.82
TGFBR1-208ENST00000550253 RNF19BQ6ZMZ0 732 aa9.92□□□□□ -0.82
TGFBR1-208ENST00000550253 ZC3H4Q9UPT8 1303 aaKnown RBP9.91□□□□□ -0.82
TGFBR1-208ENST00000550253 RBM47A0AV96 593 aaKnown RBP9.91□□□□□ -0.82
TGFBR1-208ENST00000550253 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
TGFBR1-208ENST00000550253 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
TGFBR1-208ENST00000550253 DEPDC4Q8N2C3 294 aa9.91□□□□□ -0.82
TGFBR1-208ENST00000550253 SP7Q8TDD2 431 aaPredicted RBP9.91□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L15C9J2P7 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L10C9JJH3 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L13C9JLJ4 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L12C9JPN9 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L11C9JVI0 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L21D6R901 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L18D6R9N7 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L22D6RA61 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L17D6RBQ6 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L19D6RCP7 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L20D6RJB6 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USP17L24Q0WX57 530 aa9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 USB1Q9BQ65 265 aaKnown RBP9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 MKRN1Q9UHC7 482 aaKnown RBP9.9□□□□□ -0.82
TGFBR1-208ENST00000550253 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
TGFBR1-208ENST00000550253 ARID4AP29374 1257 aaPredicted RBP9.89□□□□□ -0.83
TGFBR1-208ENST00000550253 PTK7Q13308 1070 aa9.89□□□□□ -0.83
TGFBR1-208ENST00000550253 AXIN2Q9Y2T1 843 aa9.89□□□□□ -0.83
TGFBR1-208ENST00000550253 SALL2Q9Y467 1007 aaPredicted RBP9.89□□□□□ -0.83
TGFBR1-208ENST00000550253 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
TGFBR1-208ENST00000550253 BRICD5Q6PL45 260 aa9.88□□□□□ -0.83
TGFBR1-208ENST00000550253 DNAJC14Q6Y2X3 702 aaPredicted RBP9.88□□□□□ -0.83
TGFBR1-208ENST00000550253 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
TGFBR1-208ENST00000550253 MAP10Q9P2G4 905 aa9.88□□□□□ -0.83
TGFBR1-208ENST00000550253 CEP126Q9P2H0 1117 aa9.88□□□□□ -0.83
TGFBR1-208ENST00000550253 PHTF2Q8N3S3 785 aa9.87□□□□□ -0.83
TGFBR1-208ENST00000550253 CLP1Q92989 425 aaKnown RBP9.87□□□□□ -0.83
TGFBR1-208ENST00000550253 FANCD2Q9BXW9 1451 aa9.87□□□□□ -0.83
TGFBR1-208ENST00000550253 NBPF3Q9H094 633 aa9.87□□□□□ -0.83
TGFBR1-208ENST00000550253 RASA1P20936 1047 aa9.86□□□□□ -0.83
TGFBR1-208ENST00000550253 NCOA4Q13772 614 aa9.86□□□□□ -0.83
TGFBR1-208ENST00000550253 PTPRNQ16849 979 aa9.86□□□□□ -0.83
TGFBR1-208ENST00000550253 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
TGFBR1-208ENST00000550253 FAM200AQ8TCP9 573 aa9.86□□□□□ -0.83
TGFBR1-208ENST00000550253 CDCA7Q9BWT1 371 aaPredicted RBP9.86□□□□□ -0.83
TGFBR1-208ENST00000550253 URB2Q14146 1524 aaKnown RBP9.85□□□□□ -0.83
TGFBR1-208ENST00000550253 ATP5J2-PTCD1G3V325 749 aa9.85□□□□□ -0.83
TGFBR1-208ENST00000550253 ERCC3P19447 782 aa9.85□□□□□ -0.83
TGFBR1-208ENST00000550253 THAP11Q96EK4 314 aa9.85□□□□□ -0.83
TGFBR1-208ENST00000550253 OCSTAMPQ9BR26 566 aa9.85□□□□□ -0.83
TGFBR1-208ENST00000550253 IGSF5Q9NSI5 407 aa9.85□□□□□ -0.83
TGFBR1-208ENST00000550253 SOWAHDA6NJG2 315 aa9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 LZTS3O60299 673 aaPredicted RBP9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 JUNDP17535 347 aa9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 CHIC2Q9UKJ5 165 aa9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 MYT1LQ9UL68 1186 aa9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 GPSM3Q9Y4H4 160 aa9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 CFTRP13569 1480 aa9.84□□□□□ -0.83
TGFBR1-208ENST00000550253 PBX2P40425 430 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms