RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 NKTRP30414 1462 aaKnown RBP13.68□□□□□ -0.22
SMARCC2-208ENST00000550150 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
SMARCC2-208ENST00000550150 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
SMARCC2-208ENST00000550150 FTSJ3Q8IY81 847 aaKnown RBP13.68□□□□□ -0.22
SMARCC2-208ENST00000550150 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
SMARCC2-208ENST00000550150 USP19O94966 1318 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 CEP170BQ9Y4F5 1589 aaPredicted RBP13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 RLBP1P12271 317 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 FAM43AQ8N2R8 423 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 PCDHB15Q9Y5E8 787 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 MAPK8IP3Q9UPT6 1336 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 PRAM1Q96QH2 718 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 PANK2Q9BZ23 570 aa13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 RRAGDQ9NQL2 400 aaPredicted RBP13.67□□□□□ -0.22
SMARCC2-208ENST00000550150 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
SMARCC2-208ENST00000550150 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
SMARCC2-208ENST00000550150 ARHGAP23Q9P227 1491 aa13.66□□□□□ -0.22
SMARCC2-208ENST00000550150 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
SMARCC2-208ENST00000550150 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
SMARCC2-208ENST00000550150 SLIT1O75093 1534 aa13.65□□□□□ -0.22
SMARCC2-208ENST00000550150 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
SMARCC2-208ENST00000550150 GOLGA6L3A6NEY3 463 aa13.65□□□□□ -0.22
SMARCC2-208ENST00000550150 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
SMARCC2-208ENST00000550150 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
SMARCC2-208ENST00000550150 TCP11L2Q8N4U5 519 aa13.64□□□□□ -0.23
SMARCC2-208ENST00000550150 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
SMARCC2-208ENST00000550150 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
SMARCC2-208ENST00000550150 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
SMARCC2-208ENST00000550150 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
SMARCC2-208ENST00000550150 MED14O60244 1454 aa13.63□□□□□ -0.23
SMARCC2-208ENST00000550150 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
SMARCC2-208ENST00000550150 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 TXNDC2Q86VQ3 553 aa13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 ZNF142P52746 1687 aaPredicted RBP13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 HSP90AA1P07900 732 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 U2SURPO15042 1029 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-208ENST00000550150 RARSP54136 660 aaKnown RBP13.61□□□□□ -0.23
SMARCC2-208ENST00000550150 ITPRIPQ8IWB1 547 aa13.61□□□□□ -0.23
SMARCC2-208ENST00000550150 ROBO2Q9HCK4 1378 aa13.61□□□□□ -0.23
SMARCC2-208ENST00000550150 RWDD1Q9H446 243 aaPredicted RBP13.61□□□□□ -0.23
SMARCC2-208ENST00000550150 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
SMARCC2-208ENST00000550150 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
SMARCC2-208ENST00000550150 PLEKHG1Q9ULL1 1385 aa13.6□□□□□ -0.23
SMARCC2-208ENST00000550150 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
SMARCC2-208ENST00000550150 XRCC6P12956 609 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMARCC2-208ENST00000550150 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
SMARCC2-208ENST00000550150 UBE2Q2Q8WVN8 375 aa13.6□□□□□ -0.23
SMARCC2-208ENST00000550150 DLC1Q96QB1 1528 aa13.6□□□□□ -0.23
SMARCC2-208ENST00000550150 MTHFSP49914 203 aa13.59□□□□□ -0.23
SMARCC2-208ENST00000550150 C22orf23Q9BZE7 217 aa13.59□□□□□ -0.23
SMARCC2-208ENST00000550150 SMC4Q9NTJ3 1288 aa13.59□□□□□ -0.23
SMARCC2-208ENST00000550150 CD163L1Q9NR16 1453 aa13.58□□□□□ -0.23
SMARCC2-208ENST00000550150 TBC1D32Q96NH3 1257 aa13.58□□□□□ -0.23
SMARCC2-208ENST00000550150 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
SMARCC2-208ENST00000550150 CPS1P31327 1500 aa13.58□□□□□ -0.24
SMARCC2-208ENST00000550150 TRAK2O60296 914 aa13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 KCNA4P22459 653 aa13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 MCM4P33991 863 aa13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 IQSEC2Q5JU85 1478 aa13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 SETD1BQ9UPS6 1966 aaKnown RBP13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
SMARCC2-208ENST00000550150 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
SMARCC2-208ENST00000550150 TECPR2O15040 1411 aa13.56□□□□□ -0.24
SMARCC2-208ENST00000550150 ANTXR1Q9H6X2 564 aa13.55□□□□□ -0.24
SMARCC2-208ENST00000550150 KDM4FA0A1W2PPD8 638 aa13.55□□□□□ -0.24
SMARCC2-208ENST00000550150 RBM33Q96EV2 1170 aaKnown RBP13.55□□□□□ -0.24
SMARCC2-208ENST00000550150 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 DZIP1LQ8IYY4 767 aaKnown RBP13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 TRIM44Q96DX7 344 aaPredicted RBP13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 HSP90AB1P08238 724 aaKnown RBP13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 CDK19Q9BWU1 502 aa13.54□□□□□ -0.24
SMARCC2-208ENST00000550150 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
SMARCC2-208ENST00000550150 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
SMARCC2-208ENST00000550150 A0A1W2PP64 1363 aa13.53□□□□□ -0.24
SMARCC2-208ENST00000550150 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
SMARCC2-208ENST00000550150 MYH16Q9H6N6 1097 aa13.53□□□□□ -0.24
SMARCC2-208ENST00000550150 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.24
SMARCC2-208ENST00000550150 EXOSC9Q06265 439 aaKnown RBP13.52□□□□□ -0.24
SMARCC2-208ENST00000550150 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.24
SMARCC2-208ENST00000550150 RGPD8O14715 1765 aaPredicted RBP13.52□□□□□ -0.24
SMARCC2-208ENST00000550150 AKAP12Q02952 1782 aa13.52□□□□□ -0.25
SMARCC2-208ENST00000550150 MVPQ14764 893 aaKnown RBP13.52□□□□□ -0.25
SMARCC2-208ENST00000550150 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
SMARCC2-208ENST00000550150 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
SMARCC2-208ENST00000550150 COL3A1P02461 1466 aaPredicted RBP13.51□□□□□ -0.25
SMARCC2-208ENST00000550150 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
SMARCC2-208ENST00000550150 MON2Q7Z3U7 1717 aa13.51□□□□□ -0.25
SMARCC2-208ENST00000550150 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms