RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
TROAP-210ENST00000549534 AATKQ6ZMQ8 1374 aa16.67■□□□□ 0.26
TROAP-210ENST00000549534 KIF1AQ12756 1690 aa16.66■□□□□ 0.26
TROAP-210ENST00000549534 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
TROAP-210ENST00000549534 DAPK1P53355 1430 aa16.66■□□□□ 0.26
TROAP-210ENST00000549534 RGPD3A6NKT7 1758 aaPredicted RBP16.66■□□□□ 0.26
TROAP-210ENST00000549534 COL14A1Q05707 1796 aaKnown RBP16.66■□□□□ 0.26
TROAP-210ENST00000549534 RGPD4Q7Z3J3 1758 aa16.66■□□□□ 0.26
TROAP-210ENST00000549534 ZNF326Q5BKZ1 582 aaKnown RBP16.65■□□□□ 0.26
TROAP-210ENST00000549534 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
TROAP-210ENST00000549534 ABCA3Q99758 1704 aa16.64■□□□□ 0.25
TROAP-210ENST00000549534 BARGINQ6ZT62 677 aa16.63■□□□□ 0.25
TROAP-210ENST00000549534 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
TROAP-210ENST00000549534 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
TROAP-210ENST00000549534 JMYQ8N9B5 988 aa16.62■□□□□ 0.25
TROAP-210ENST00000549534 STK32BQ9NY57 414 aa16.62■□□□□ 0.25
TROAP-210ENST00000549534 NAIPQ13075 1403 aa16.62■□□□□ 0.25
TROAP-210ENST00000549534 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
TROAP-210ENST00000549534 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
TROAP-210ENST00000549534 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
TROAP-210ENST00000549534 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
TROAP-210ENST00000549534 WWC3Q9ULE0 1092 aa16.59■□□□□ 0.25
TROAP-210ENST00000549534 CHIC2Q9UKJ5 165 aa16.58■□□□□ 0.24
TROAP-210ENST00000549534 ANKRD50Q9ULJ7 1429 aa16.58■□□□□ 0.24
TROAP-210ENST00000549534 E9PCH4 1651 aa16.57■□□□□ 0.24
TROAP-210ENST00000549534 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
TROAP-210ENST00000549534 ADCY9O60503 1353 aa16.55■□□□□ 0.24
TROAP-210ENST00000549534 PROM2Q8N271 834 aa16.55■□□□□ 0.24
TROAP-210ENST00000549534 KLRG1Q96E93 195 aa16.55■□□□□ 0.24
TROAP-210ENST00000549534 VGFO15240 615 aaPredicted RBP16.53■□□□□ 0.24
TROAP-210ENST00000549534 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
TROAP-210ENST00000549534 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
TROAP-210ENST00000549534 KIF3CO14782 793 aa16.52■□□□□ 0.24
TROAP-210ENST00000549534 TECPR2O15040 1411 aa16.52■□□□□ 0.23
TROAP-210ENST00000549534 NRXN1Q9ULB1 1477 aa16.51■□□□□ 0.23
TROAP-210ENST00000549534 OVOS2A0A0G2JMS6 1433 aa16.51■□□□□ 0.23
TROAP-210ENST00000549534 OVOS2A0A0J9YW53 1432 aa16.51■□□□□ 0.23
TROAP-210ENST00000549534 OVOS2Q6IE36 1432 aa16.51■□□□□ 0.23
TROAP-210ENST00000549534 ZNF526Q8TF50 670 aaPredicted RBP16.5■□□□□ 0.23
TROAP-210ENST00000549534 YBX3P16989 372 aaKnown RBP eCLIP16.49■□□□□ 0.237e-8■□□□□ 11.2
TROAP-210ENST00000549534 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
TROAP-210ENST00000549534 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
TROAP-210ENST00000549534 USP35Q9P2H5 1018 aa16.49■□□□□ 0.23
TROAP-210ENST00000549534 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
TROAP-210ENST00000549534 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
TROAP-210ENST00000549534 TOMM70O94826 608 aa16.48■□□□□ 0.23
TROAP-210ENST00000549534 TXNRD1Q16881 649 aa16.48■□□□□ 0.23
TROAP-210ENST00000549534 POLD1P28340 1107 aa16.47■□□□□ 0.23
TROAP-210ENST00000549534 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
TROAP-210ENST00000549534 SLC16A10Q8TF71 515 aa16.45■□□□□ 0.22
TROAP-210ENST00000549534 EVA1CP58658 441 aa16.44■□□□□ 0.22
TROAP-210ENST00000549534 WAPLQ7Z5K2 1190 aa16.44■□□□□ 0.22
TROAP-210ENST00000549534 NLGN2Q8NFZ4 835 aa16.44■□□□□ 0.22
TROAP-210ENST00000549534 SSH2Q76I76 1423 aa16.43■□□□□ 0.22
TROAP-210ENST00000549534 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
TROAP-210ENST00000549534 BCL9O00512 1426 aa16.41■□□□□ 0.22
TROAP-210ENST00000549534 PEAK1Q9H792 1746 aa16.41■□□□□ 0.22
TROAP-210ENST00000549534 KANK4Q5T7N3 995 aaPredicted RBP16.4■□□□□ 0.22
TROAP-210ENST00000549534 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
TROAP-210ENST00000549534 ATP7BP35670 1465 aa16.39■□□□□ 0.21
TROAP-210ENST00000549534 RPGRIP1LQ68CZ1 1315 aa16.39■□□□□ 0.21
TROAP-210ENST00000549534 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
TROAP-210ENST00000549534 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
TROAP-210ENST00000549534 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
TROAP-210ENST00000549534 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
TROAP-210ENST00000549534 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
TROAP-210ENST00000549534 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
TROAP-210ENST00000549534 PCNTO95613 3336 aa16.36■□□□□ 0.21
TROAP-210ENST00000549534 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
TROAP-210ENST00000549534 NUP155O75694 1391 aa16.36■□□□□ 0.21
TROAP-210ENST00000549534 PLEKHH1Q9ULM0 1364 aa16.36■□□□□ 0.21
TROAP-210ENST00000549534 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
TROAP-210ENST00000549534 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
TROAP-210ENST00000549534 STK26Q9P289 416 aa16.35■□□□□ 0.21
TROAP-210ENST00000549534 TRPM3Q9HCF6 1732 aaPredicted RBP16.35■□□□□ 0.21
TROAP-210ENST00000549534 SBF2Q86WG5 1849 aa16.35■□□□□ 0.21
TROAP-210ENST00000549534 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
TROAP-210ENST00000549534 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
TROAP-210ENST00000549534 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
TROAP-210ENST00000549534 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
TROAP-210ENST00000549534 DDB1Q16531 1140 aa16.33■□□□□ 0.2
TROAP-210ENST00000549534 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
TROAP-210ENST00000549534 RBM46Q8TBY0 533 aaKnown RBP16.33■□□□□ 0.2
TROAP-210ENST00000549534 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
TROAP-210ENST00000549534 CRYBG1Q9Y4K1 1723 aa16.33■□□□□ 0.2
TROAP-210ENST00000549534 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
TROAP-210ENST00000549534 HTRA3P83110 453 aa16.31■□□□□ 0.2
TROAP-210ENST00000549534 FSTL1Q12841 308 aa16.31■□□□□ 0.2
TROAP-210ENST00000549534 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
TROAP-210ENST00000549534 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
TROAP-210ENST00000549534 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
TROAP-210ENST00000549534 ZC3H6P61129 1189 aaKnown RBP16.29■□□□□ 0.2
TROAP-210ENST00000549534 ANKRD30BQ9BXX2 1392 aa16.28■□□□□ 0.2
TROAP-210ENST00000549534 TOPAZ1Q8N9V7 1692 aa16.28■□□□□ 0.2
TROAP-210ENST00000549534 PAPPAQ13219 1627 aa16.28■□□□□ 0.2
TROAP-210ENST00000549534 KNDC1Q76NI1 1749 aa16.27■□□□□ 0.19
TROAP-210ENST00000549534 ARHGEF28Q8N1W1 1705 aaKnown RBP16.27■□□□□ 0.19
TROAP-210ENST00000549534 IFT172Q9UG01 1749 aa16.27■□□□□ 0.19
TROAP-210ENST00000549534 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
TROAP-210ENST00000549534 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms