RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 ADAMTS8Q9UP79 889 aa15.86■□□□□ 0.13
ERBB3-210ENST00000549472 USP6P35125 1406 aa15.85■□□□□ 0.13
ERBB3-210ENST00000549472 CADPS2Q86UW7 1296 aa15.85■□□□□ 0.13
ERBB3-210ENST00000549472 RBM33Q96EV2 1170 aaKnown RBP15.85■□□□□ 0.13
ERBB3-210ENST00000549472 MTHFSP49914 203 aa15.84■□□□□ 0.13
ERBB3-210ENST00000549472 ACEP12821 1306 aa15.84■□□□□ 0.13
ERBB3-210ENST00000549472 SSH2Q76I76 1423 aa15.83■□□□□ 0.12
ERBB3-210ENST00000549472 NUTM2FA1L443 756 aa15.82■□□□□ 0.12
ERBB3-210ENST00000549472 TNNT2P45379 298 aaPredicted RBP15.82■□□□□ 0.12
ERBB3-210ENST00000549472 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.82■□□□□ 0.12
ERBB3-210ENST00000549472 AATKQ6ZMQ8 1374 aa15.82■□□□□ 0.12
ERBB3-210ENST00000549472 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
ERBB3-210ENST00000549472 COL3A1P02461 1466 aaPredicted RBP15.82■□□□□ 0.12
ERBB3-210ENST00000549472 STRCP1A6NGW2 1772 aa15.82■□□□□ 0.12
ERBB3-210ENST00000549472 MAP2P11137 1827 aaKnown RBP15.81■□□□□ 0.12
ERBB3-210ENST00000549472 DCCP43146 1447 aa15.81■□□□□ 0.12
ERBB3-210ENST00000549472 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
ERBB3-210ENST00000549472 TTC21BQ7Z4L5 1316 aa15.81■□□□□ 0.12
ERBB3-210ENST00000549472 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
ERBB3-210ENST00000549472 TTC21AQ8NDW8 1320 aa15.81■□□□□ 0.12
ERBB3-210ENST00000549472 LRRC7Q96NW7 1537 aa15.81■□□□□ 0.12
ERBB3-210ENST00000549472 USP54Q70EL1 1684 aa15.8■□□□□ 0.12
ERBB3-210ENST00000549472 PNPLA6Q8IY17 1366 aa15.8■□□□□ 0.12
ERBB3-210ENST00000549472 OVOS2A0A0J9YW53 1432 aa15.79■□□□□ 0.12
ERBB3-210ENST00000549472 OVOS2Q6IE36 1432 aa15.79■□□□□ 0.12
ERBB3-210ENST00000549472 COG3Q96JB2 828 aa15.79■□□□□ 0.12
ERBB3-210ENST00000549472 NME9Q86XW9 330 aa15.78■□□□□ 0.12
ERBB3-210ENST00000549472 NGDNQ8NEJ9 315 aaKnown RBP15.78■□□□□ 0.12
ERBB3-210ENST00000549472 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
ERBB3-210ENST00000549472 NUDCQ9Y266 331 aa15.77■□□□□ 0.12
ERBB3-210ENST00000549472 CDK12Q9NYV4 1490 aaPredicted RBP15.77■□□□□ 0.11
ERBB3-210ENST00000549472 USP31Q70CQ4 1352 aa15.76■□□□□ 0.11
ERBB3-210ENST00000549472 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
ERBB3-210ENST00000549472 PHF8Q9UPP1 1060 aa15.75■□□□□ 0.11
ERBB3-210ENST00000549472 PIK3C2AO00443 1686 aa15.75■□□□□ 0.11
ERBB3-210ENST00000549472 KIF1AQ12756 1690 aa15.74■□□□□ 0.11
ERBB3-210ENST00000549472 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
ERBB3-210ENST00000549472 POLKQ9UBT6 870 aa15.74■□□□□ 0.11
ERBB3-210ENST00000549472 IQSEC2Q5JU85 1478 aa15.73■□□□□ 0.11
ERBB3-210ENST00000549472 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
ERBB3-210ENST00000549472 RUNDC1Q96C34 613 aa15.72■□□□□ 0.11
ERBB3-210ENST00000549472 SLAIN2Q9P270 581 aa15.72■□□□□ 0.11
ERBB3-210ENST00000549472 LTBP4Q8N2S1 1624 aa15.72■□□□□ 0.11
ERBB3-210ENST00000549472 MARF1Q9Y4F3 1742 aaKnown RBP15.71■□□□□ 0.11
ERBB3-210ENST00000549472 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.11
ERBB3-210ENST00000549472 DIAPH1O60610 1272 aaKnown RBP15.71■□□□□ 0.11
ERBB3-210ENST00000549472 TOM1O60784 492 aa15.71■□□□□ 0.11
ERBB3-210ENST00000549472 NEFLP07196 543 aa15.71■□□□□ 0.11
ERBB3-210ENST00000549472 PSME1Q06323 249 aa15.71■□□□□ 0.11
ERBB3-210ENST00000549472 ZRANB1Q9UGI0 708 aa15.71■□□□□ 0.11
ERBB3-210ENST00000549472 C1orf167Q5SNV9 1468 aa15.71■□□□□ 0.1
ERBB3-210ENST00000549472 CCDC146Q8IYE0 955 aa15.7■□□□□ 0.1
ERBB3-210ENST00000549472 APAF1O14727 1248 aa15.69■□□□□ 0.1
ERBB3-210ENST00000549472 PNNQ9H307 717 aaKnown RBP15.69■□□□□ 0.1
ERBB3-210ENST00000549472 MST1RQ04912 1400 aa15.68■□□□□ 0.1
ERBB3-210ENST00000549472 U2AF1L5P0DN76 240 aaPredicted RBP15.68■□□□□ 0.1
ERBB3-210ENST00000549472 U2AF1Q01081 240 aaKnown RBP eCLIP15.68■□□□□ 0.13e-9■□□□□ 9.6
ERBB3-210ENST00000549472 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
ERBB3-210ENST00000549472 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
ERBB3-210ENST00000549472 ORAI2Q96SN7 254 aa15.67■□□□□ 0.1
ERBB3-210ENST00000549472 SALL2Q9Y467 1007 aaPredicted RBP15.67■□□□□ 0.1
ERBB3-210ENST00000549472 EMILIN1Q9Y6C2 1016 aa15.67■□□□□ 0.1
ERBB3-210ENST00000549472 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
ERBB3-210ENST00000549472 KIF24Q5T7B8 1368 aa15.66■□□□□ 0.1
ERBB3-210ENST00000549472 SENP3-EIF4A1A0A087X0R7 540 aa15.66■□□□□ 0.1
ERBB3-210ENST00000549472 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
ERBB3-210ENST00000549472 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
ERBB3-210ENST00000549472 CERKQ8TCT0 537 aa15.66■□□□□ 0.1
ERBB3-210ENST00000549472 PEAK1Q9H792 1746 aa15.65■□□□□ 0.1
ERBB3-210ENST00000549472 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
ERBB3-210ENST00000549472 U2SURPO15042 1029 aaKnown RBP15.65■□□□□ 0.1
ERBB3-210ENST00000549472 FOXO3O43524 673 aa15.65■□□□□ 0.1
ERBB3-210ENST00000549472 FCHSD2O94868 740 aa15.65■□□□□ 0.1
ERBB3-210ENST00000549472 RNF123Q5XPI4 1314 aa15.65■□□□□ 0.1
ERBB3-210ENST00000549472 UBAP1LF5GYI3 381 aa15.64■□□□□ 0.09
ERBB3-210ENST00000549472 PPM1GO15355 546 aaPredicted RBP15.64■□□□□ 0.09
ERBB3-210ENST00000549472 FBLN1P23142 703 aa15.64■□□□□ 0.09
ERBB3-210ENST00000549472 IL13P35225 146 aa15.64■□□□□ 0.09
ERBB3-210ENST00000549472 RRS1Q15050 365 aaKnown RBP15.64■□□□□ 0.09
ERBB3-210ENST00000549472 TCP11L2Q8N4U5 519 aa15.64■□□□□ 0.09
ERBB3-210ENST00000549472 PLEKHF1Q96S99 279 aa15.64■□□□□ 0.09
ERBB3-210ENST00000549472 PHF23Q9BUL5 403 aaPredicted RBP15.64■□□□□ 0.09
ERBB3-210ENST00000549472 NLRP6P59044 892 aa15.63■□□□□ 0.09
ERBB3-210ENST00000549472 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
ERBB3-210ENST00000549472 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
ERBB3-210ENST00000549472 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
ERBB3-210ENST00000549472 RGPD1P0DJD0 1748 aa15.63■□□□□ 0.09
ERBB3-210ENST00000549472 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
ERBB3-210ENST00000549472 FKBP8Q14318 412 aa15.62■□□□□ 0.09
ERBB3-210ENST00000549472 LMOD2Q6P5Q4 547 aa15.62■□□□□ 0.09
ERBB3-210ENST00000549472 BRINP3Q76B58 766 aa15.62■□□□□ 0.09
ERBB3-210ENST00000549472 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
ERBB3-210ENST00000549472 ABTB2Q8N961 1025 aa15.62■□□□□ 0.09
ERBB3-210ENST00000549472 FLT4P35916 1363 aa15.62■□□□□ 0.09
ERBB3-210ENST00000549472 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
ERBB3-210ENST00000549472 SLFN5Q08AF3 891 aa15.61■□□□□ 0.09
ERBB3-210ENST00000549472 WWC1Q8IX03 1113 aa15.61■□□□□ 0.09
ERBB3-210ENST00000549472 MAPK8IP3Q9UPT6 1336 aa15.61■□□□□ 0.09
ERBB3-210ENST00000549472 E9PSI1 815 aa15.6■□□□□ 0.09
ERBB3-210ENST00000549472 PIP4K2BP78356 416 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms