RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
SMARCC2-205ENST00000548130 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
SMARCC2-205ENST00000548130 ATP7BP35670 1465 aa12.56□□□□□ -0.4
SMARCC2-205ENST00000548130 PXDNQ92626 1479 aa12.56□□□□□ -0.4
SMARCC2-205ENST00000548130 SPATA31A6Q5VVP1 1343 aa12.56□□□□□ -0.4
SMARCC2-205ENST00000548130 ST20-MTHFSA0A0A6YYL1 179 aa12.55□□□□□ -0.4
SMARCC2-205ENST00000548130 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 RGPD8O14715 1765 aaPredicted RBP12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 LMOD2Q6P5Q4 547 aa12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 SPATA31A3Q5VYP0 1347 aa12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 USP47Q96K76 1375 aa12.54□□□□□ -0.4
SMARCC2-205ENST00000548130 LRP6O75581 1613 aa12.53□□□□□ -0.4
SMARCC2-205ENST00000548130 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
SMARCC2-205ENST00000548130 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
SMARCC2-205ENST00000548130 TESK2Q96S53 571 aa12.52□□□□□ -0.41
SMARCC2-205ENST00000548130 ACEP12821 1306 aa12.52□□□□□ -0.41
SMARCC2-205ENST00000548130 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
SMARCC2-205ENST00000548130 PPIP5K1Q6PFW1 1433 aa12.52□□□□□ -0.41
SMARCC2-205ENST00000548130 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-205ENST00000548130 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
SMARCC2-205ENST00000548130 SBNO1A3KN83 1393 aa12.51□□□□□ -0.41
SMARCC2-205ENST00000548130 SHPRHQ149N8 1683 aa12.51□□□□□ -0.41
SMARCC2-205ENST00000548130 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
SMARCC2-205ENST00000548130 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
SMARCC2-205ENST00000548130 ATAD2Q6PL18 1390 aa12.49□□□□□ -0.41
SMARCC2-205ENST00000548130 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
SMARCC2-205ENST00000548130 RGS17Q9UGC6 210 aaPredicted RBP12.49□□□□□ -0.41
SMARCC2-205ENST00000548130 TMC1Q8TDI8 760 aa12.48□□□□□ -0.41
SMARCC2-205ENST00000548130 C8orf37Q96NL8 207 aa12.48□□□□□ -0.41
SMARCC2-205ENST00000548130 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
SMARCC2-205ENST00000548130 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
SMARCC2-205ENST00000548130 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
SMARCC2-205ENST00000548130 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
SMARCC2-205ENST00000548130 TOPAZ1Q8N9V7 1692 aa12.47□□□□□ -0.41
SMARCC2-205ENST00000548130 TMF1P82094 1093 aa12.46□□□□□ -0.41
SMARCC2-205ENST00000548130 SLC12A5Q9H2X9 1139 aa12.46□□□□□ -0.41
SMARCC2-205ENST00000548130 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
SMARCC2-205ENST00000548130 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
SMARCC2-205ENST00000548130 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMARCC2-205ENST00000548130 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
SMARCC2-205ENST00000548130 NGLY1Q96IV0 654 aa12.45□□□□□ -0.42
SMARCC2-205ENST00000548130 AFF2P51816 1311 aa12.44□□□□□ -0.42
SMARCC2-205ENST00000548130 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
SMARCC2-205ENST00000548130 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
SMARCC2-205ENST00000548130 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
SMARCC2-205ENST00000548130 USP6P35125 1406 aa12.44□□□□□ -0.42
SMARCC2-205ENST00000548130 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
SMARCC2-205ENST00000548130 TRPM3Q9HCF6 1732 aaPredicted RBP12.43□□□□□ -0.42
SMARCC2-205ENST00000548130 ZNF772Q68DY9 489 aaPredicted RBP12.43□□□□□ -0.42
SMARCC2-205ENST00000548130 ABTB2Q8N961 1025 aa12.43□□□□□ -0.42
SMARCC2-205ENST00000548130 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
SMARCC2-205ENST00000548130 CPSF1Q10570 1443 aaKnown RBP12.42□□□□□ -0.42
SMARCC2-205ENST00000548130 TTC21BQ7Z4L5 1316 aa12.41□□□□□ -0.42
SMARCC2-205ENST00000548130 HDGFL2Q7Z4V5 671 aaPredicted RBP12.41□□□□□ -0.42
SMARCC2-205ENST00000548130 KTN1Q86UP2 1357 aaKnown RBP12.41□□□□□ -0.42
SMARCC2-205ENST00000548130 SSH2Q76I76 1423 aa12.4□□□□□ -0.42
SMARCC2-205ENST00000548130 CDCA8Q53HL2 280 aa12.4□□□□□ -0.42
SMARCC2-205ENST00000548130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMARCC2-205ENST00000548130 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
SMARCC2-205ENST00000548130 USP21Q9UK80 565 aa12.4□□□□□ -0.42
SMARCC2-205ENST00000548130 ALS2Q96Q42 1657 aa12.4□□□□□ -0.42
SMARCC2-205ENST00000548130 BRD4O60885 1362 aaPredicted RBP12.4□□□□□ -0.42
SMARCC2-205ENST00000548130 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.43
SMARCC2-205ENST00000548130 FAM83GA6ND36 823 aa12.39□□□□□ -0.43
SMARCC2-205ENST00000548130 NLRP6P59044 892 aa12.39□□□□□ -0.43
SMARCC2-205ENST00000548130 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
SMARCC2-205ENST00000548130 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
SMARCC2-205ENST00000548130 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
SMARCC2-205ENST00000548130 A0A1W2PP64 1363 aa12.39□□□□□ -0.43
SMARCC2-205ENST00000548130 ZC3H6P61129 1189 aaKnown RBP12.38□□□□□ -0.43
SMARCC2-205ENST00000548130 QTRT2Q9H974 415 aaKnown RBP12.38□□□□□ -0.43
SMARCC2-205ENST00000548130 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
SMARCC2-205ENST00000548130 NINLQ9Y2I6 1382 aa12.38□□□□□ -0.43
SMARCC2-205ENST00000548130 USP19O94966 1318 aa12.37□□□□□ -0.43
SMARCC2-205ENST00000548130 NME9Q86XW9 330 aa12.37□□□□□ -0.43
SMARCC2-205ENST00000548130 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
SMARCC2-205ENST00000548130 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
SMARCC2-205ENST00000548130 SOX12O15370 315 aa12.36□□□□□ -0.43
SMARCC2-205ENST00000548130 GCP02774 474 aa12.36□□□□□ -0.43
SMARCC2-205ENST00000548130 RXRBP28702 533 aa12.36□□□□□ -0.43
SMARCC2-205ENST00000548130 CHRNA2Q15822 529 aa12.36□□□□□ -0.43
SMARCC2-205ENST00000548130 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
SMARCC2-205ENST00000548130 PRDM11Q9NQV5 511 aa12.36□□□□□ -0.43
SMARCC2-205ENST00000548130 ANKRD36BQ8N2N9 1353 aa12.35□□□□□ -0.43
SMARCC2-205ENST00000548130 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
SMARCC2-205ENST00000548130 C11orf95C9JLR9 678 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-205ENST00000548130 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
SMARCC2-205ENST00000548130 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-205ENST00000548130 SLIT2O94813 1529 aa12.35□□□□□ -0.43
SMARCC2-205ENST00000548130 EDC4Q6P2E9 1401 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-205ENST00000548130 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
SMARCC2-205ENST00000548130 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
SMARCC2-205ENST00000548130 BTG4Q9NY30 223 aa12.34□□□□□ -0.43
SMARCC2-205ENST00000548130 AKAP12Q02952 1782 aa12.33□□□□□ -0.44
SMARCC2-205ENST00000548130 RBM6P78332 1123 aaKnown RBP12.33□□□□□ -0.44
SMARCC2-205ENST00000548130 ATRNO75882 1429 aa12.33□□□□□ -0.44
SMARCC2-205ENST00000548130 CCDC9Q9Y3X0 531 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms