RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 CCDC61Q9Y6R9 512 aa20.67■□□□□ 0.9
TROAP-203ENST00000546735 ACEP12821 1306 aa20.67■□□□□ 0.9
TROAP-203ENST00000546735 ITSN1Q15811 1721 aa20.67■□□□□ 0.9
TROAP-203ENST00000546735 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
TROAP-203ENST00000546735 CENPJQ9HC77 1338 aaPredicted RBP20.65■□□□□ 0.9
TROAP-203ENST00000546735 NBPF8Q3BBV2 869 aa20.65■□□□□ 0.9
TROAP-203ENST00000546735 A0A0G2JS52 829 aa20.64■□□□□ 0.89
TROAP-203ENST00000546735 ONECUT3O60422 494 aaPredicted RBP20.64■□□□□ 0.89
TROAP-203ENST00000546735 SRPK2P78362 688 aaKnown RBP20.64■□□□□ 0.89
TROAP-203ENST00000546735 MYT1Q01538 1121 aa20.64■□□□□ 0.89
TROAP-203ENST00000546735 CABP2Q9NPB3 220 aa20.64■□□□□ 0.89
TROAP-203ENST00000546735 BRWD3Q6RI45 1802 aa20.64■□□□□ 0.89
TROAP-203ENST00000546735 NRAPQ86VF7 1730 aa20.64■□□□□ 0.89
TROAP-203ENST00000546735 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.89
TROAP-203ENST00000546735 POLR3AO14802 1390 aaPredicted RBP20.63■□□□□ 0.89
TROAP-203ENST00000546735 PLEKHG3A1L390 1219 aa20.63■□□□□ 0.89
TROAP-203ENST00000546735 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
TROAP-203ENST00000546735 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
TROAP-203ENST00000546735 PRDM11Q9NQV5 511 aa20.63■□□□□ 0.89
TROAP-203ENST00000546735 TOPAZ1Q8N9V7 1692 aa20.63■□□□□ 0.89
TROAP-203ENST00000546735 COL14A1Q05707 1796 aaKnown RBP20.62■□□□□ 0.89
TROAP-203ENST00000546735 CHRNA2Q15822 529 aa20.62■□□□□ 0.89
TROAP-203ENST00000546735 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
TROAP-203ENST00000546735 ZC3H6P61129 1189 aaKnown RBP20.61■□□□□ 0.89
TROAP-203ENST00000546735 KRT27Q7Z3Y8 459 aa20.61■□□□□ 0.89
TROAP-203ENST00000546735 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
TROAP-203ENST00000546735 PPIP5K1Q6PFW1 1433 aa20.6■□□□□ 0.89
TROAP-203ENST00000546735 EP400Q96L91 3159 aa20.59■□□□□ 0.89
TROAP-203ENST00000546735 SPATA31A5Q5VU36 1347 aa20.58■□□□□ 0.89
TROAP-203ENST00000546735 SPATA31A7Q8IWB4 1347 aa20.58■□□□□ 0.89
TROAP-203ENST00000546735 DEFB132Q7Z7B7 95 aa20.58■□□□□ 0.89
TROAP-203ENST00000546735 PHRF1Q9P1Y6 1649 aaKnown RBP20.57■□□□□ 0.88
TROAP-203ENST00000546735 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
TROAP-203ENST00000546735 STRN4Q9NRL3 753 aa20.57■□□□□ 0.88
TROAP-203ENST00000546735 ZRANB1Q9UGI0 708 aa20.57■□□□□ 0.88
TROAP-203ENST00000546735 QRICH2Q9H0J4 1663 aa20.57■□□□□ 0.88
TROAP-203ENST00000546735 CABP1Q9NZU7 370 aa20.55■□□□□ 0.88
TROAP-203ENST00000546735 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
TROAP-203ENST00000546735 SF3B2Q13435 895 aaKnown RBP20.54■□□□□ 0.88
TROAP-203ENST00000546735 FAM182BQ5T319 152 aa20.54■□□□□ 0.88
TROAP-203ENST00000546735 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
TROAP-203ENST00000546735 USP19O94966 1318 aa20.52■□□□□ 0.87
TROAP-203ENST00000546735 SPATA31A1Q5TZJ5 1347 aa20.52■□□□□ 0.87
TROAP-203ENST00000546735 NRKQ7Z2Y5 1582 aa20.51■□□□□ 0.87
TROAP-203ENST00000546735 NLRP13Q86W25 1043 aa20.5■□□□□ 0.87
TROAP-203ENST00000546735 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
TROAP-203ENST00000546735 EVC2Q86UK5 1308 aa20.5■□□□□ 0.87
TROAP-203ENST00000546735 GCP02774 474 aa20.49■□□□□ 0.87
TROAP-203ENST00000546735 EVA1CP58658 441 aa20.49■□□□□ 0.87
TROAP-203ENST00000546735 USP6P35125 1406 aa20.49■□□□□ 0.87
TROAP-203ENST00000546735 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
TROAP-203ENST00000546735 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
TROAP-203ENST00000546735 SSH2Q76I76 1423 aa20.47■□□□□ 0.87
TROAP-203ENST00000546735 ZBTB7CA1YPR0 619 aa20.47■□□□□ 0.87
TROAP-203ENST00000546735 LARP1Q6PKG0 1096 aaKnown RBP20.47■□□□□ 0.87
TROAP-203ENST00000546735 CPDO75976 1380 aa20.46■□□□□ 0.87
TROAP-203ENST00000546735 NLRP6P59044 892 aa20.46■□□□□ 0.87
TROAP-203ENST00000546735 BRD4O60885 1362 aaPredicted RBP20.45■□□□□ 0.86
TROAP-203ENST00000546735 BAG6P46379 1132 aa20.44■□□□□ 0.86
TROAP-203ENST00000546735 LMO7Q8WWI1 1683 aa20.43■□□□□ 0.86
TROAP-203ENST00000546735 EN1Q05925 392 aaPredicted RBP20.42■□□□□ 0.86
TROAP-203ENST00000546735 CARD11Q9BXL7 1154 aa20.41■□□□□ 0.86
TROAP-203ENST00000546735 BARGINQ6ZT62 677 aa20.4■□□□□ 0.86
TROAP-203ENST00000546735 TTC21BQ7Z4L5 1316 aa20.4■□□□□ 0.86
TROAP-203ENST00000546735 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
TROAP-203ENST00000546735 PIK3C2AO00443 1686 aa20.39■□□□□ 0.86
TROAP-203ENST00000546735 SLIT3O75094 1523 aa20.39■□□□□ 0.85
TROAP-203ENST00000546735 COL5A2P05997 1499 aaPredicted RBP20.39■□□□□ 0.85
TROAP-203ENST00000546735 TONSLQ96HA7 1378 aa20.39■□□□□ 0.85
TROAP-203ENST00000546735 SOX12O15370 315 aa20.38■□□□□ 0.85
TROAP-203ENST00000546735 TRIM37O94972 964 aa20.38■□□□□ 0.85
TROAP-203ENST00000546735 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
TROAP-203ENST00000546735 PSDA5PKW4 1024 aaPredicted RBP20.37■□□□□ 0.85
TROAP-203ENST00000546735 PDE3BQ13370 1112 aa20.37■□□□□ 0.85
TROAP-203ENST00000546735 FAM196AQ6ZSG2 479 aa20.37■□□□□ 0.85
TROAP-203ENST00000546735 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
TROAP-203ENST00000546735 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
TROAP-203ENST00000546735 AATKQ6ZMQ8 1374 aa20.35■□□□□ 0.85
TROAP-203ENST00000546735 SRCAPQ6ZRS2 3230 aa20.35■□□□□ 0.85
TROAP-203ENST00000546735 EZH2Q15910 746 aaKnown RBP20.35■□□□□ 0.85
TROAP-203ENST00000546735 AXIN2Q9Y2T1 843 aa20.35■□□□□ 0.85
TROAP-203ENST00000546735 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
TROAP-203ENST00000546735 THRAP3Q9Y2W1 955 aaKnown RBP20.34■□□□□ 0.85
TROAP-203ENST00000546735 CRB1P82279 1406 aa20.34■□□□□ 0.85
TROAP-203ENST00000546735 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
TROAP-203ENST00000546735 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.85
TROAP-203ENST00000546735 SBNO2Q9Y2G9 1366 aa20.33■□□□□ 0.84
TROAP-203ENST00000546735 TTC21AQ8NDW8 1320 aa20.32■□□□□ 0.84
TROAP-203ENST00000546735 TOM1L2Q6ZVM7 507 aa20.32■□□□□ 0.84
TROAP-203ENST00000546735 ARHGEF25Q86VW2 580 aa20.32■□□□□ 0.84
TROAP-203ENST00000546735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.32■□□□□ 0.84
TROAP-203ENST00000546735 TMC1Q8TDI8 760 aa20.32■□□□□ 0.84
TROAP-203ENST00000546735 DISP2A7MBM2 1401 aa20.31■□□□□ 0.84
TROAP-203ENST00000546735 APBA3O96018 575 aa20.31■□□□□ 0.84
TROAP-203ENST00000546735 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
TROAP-203ENST00000546735 KCNH5Q8NCM2 988 aa20.31■□□□□ 0.84
TROAP-203ENST00000546735 CAMKK2Q96RR4 588 aa20.3■□□□□ 0.84
TROAP-203ENST00000546735 COL18A1P39060 1754 aa20.3■□□□□ 0.84
TROAP-203ENST00000546735 R3HDM1Q15032 1099 aaKnown RBP20.29■□□□□ 0.84
TROAP-203ENST00000546735 SLC12A5Q9H2X9 1139 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms