RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 GLI3P10071 1580 aa17.11■□□□□ 0.33
UBC-214ENST00000546271 NGDNQ8NEJ9 315 aaKnown RBP17.11■□□□□ 0.33
UBC-214ENST00000546271 COL14A1Q05707 1796 aaKnown RBP17.1■□□□□ 0.33
UBC-214ENST00000546271 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
UBC-214ENST00000546271 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
UBC-214ENST00000546271 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
UBC-214ENST00000546271 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
UBC-214ENST00000546271 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
UBC-214ENST00000546271 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
UBC-214ENST00000546271 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
UBC-214ENST00000546271 CABP2Q9NPB3 220 aa17.07■□□□□ 0.32
UBC-214ENST00000546271 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
UBC-214ENST00000546271 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
UBC-214ENST00000546271 ACEP12821 1306 aa17.05■□□□□ 0.32
UBC-214ENST00000546271 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
UBC-214ENST00000546271 CARD11Q9BXL7 1154 aa17.05■□□□□ 0.32
UBC-214ENST00000546271 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
UBC-214ENST00000546271 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
UBC-214ENST00000546271 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
UBC-214ENST00000546271 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
UBC-214ENST00000546271 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
UBC-214ENST00000546271 CABP1Q9NZU7 370 aa17■□□□□ 0.31
UBC-214ENST00000546271 CLSPNQ9HAW4 1339 aa16.99■□□□□ 0.31
UBC-214ENST00000546271 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
UBC-214ENST00000546271 AKAP12Q02952 1782 aa16.98■□□□□ 0.31
UBC-214ENST00000546271 A0A0G2JS52 829 aa16.98■□□□□ 0.31
UBC-214ENST00000546271 MYT1Q01538 1121 aa16.98■□□□□ 0.31
UBC-214ENST00000546271 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
UBC-214ENST00000546271 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
UBC-214ENST00000546271 VPS72Q15906 364 aa16.97■□□□□ 0.31
UBC-214ENST00000546271 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
UBC-214ENST00000546271 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
UBC-214ENST00000546271 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
UBC-214ENST00000546271 PRDM11Q9NQV5 511 aa16.95■□□□□ 0.3
UBC-214ENST00000546271 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
UBC-214ENST00000546271 USP6P35125 1406 aa16.95■□□□□ 0.3
UBC-214ENST00000546271 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
UBC-214ENST00000546271 KIAA0232Q92628 1395 aa16.94■□□□□ 0.3
UBC-214ENST00000546271 SEPT12Q8IYM1 358 aa16.93■□□□□ 0.3
UBC-214ENST00000546271 THSD7AQ9UPZ6 1657 aa16.93■□□□□ 0.3
UBC-214ENST00000546271 LMO7Q8WWI1 1683 aa16.92■□□□□ 0.3
UBC-214ENST00000546271 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
UBC-214ENST00000546271 MON2Q7Z3U7 1717 aa16.92■□□□□ 0.3
UBC-214ENST00000546271 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
UBC-214ENST00000546271 EP400Q96L91 3159 aa16.91■□□□□ 0.3
UBC-214ENST00000546271 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
UBC-214ENST00000546271 CHRNA2Q15822 529 aa16.91■□□□□ 0.3
UBC-214ENST00000546271 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
UBC-214ENST00000546271 USP19O94966 1318 aa16.91■□□□□ 0.3
UBC-214ENST00000546271 ZC3H6P61129 1189 aaKnown RBP16.9■□□□□ 0.3
UBC-214ENST00000546271 FAM98CQ17RN3 349 aaKnown RBP16.9■□□□□ 0.3
UBC-214ENST00000546271 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
UBC-214ENST00000546271 TESK2Q96S53 571 aa16.9■□□□□ 0.3
UBC-214ENST00000546271 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
UBC-214ENST00000546271 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
UBC-214ENST00000546271 STRN4Q9NRL3 753 aa16.89■□□□□ 0.29
UBC-214ENST00000546271 BLMP54132 1417 aaPredicted RBP16.88■□□□□ 0.29
UBC-214ENST00000546271 SLIT3O75094 1523 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 NLRP6P59044 892 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 KRT27Q7Z3Y8 459 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 PUS7Q96PZ0 661 aaKnown RBP16.87■□□□□ 0.29
UBC-214ENST00000546271 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 USP47Q96K76 1375 aa16.87■□□□□ 0.29
UBC-214ENST00000546271 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
UBC-214ENST00000546271 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
UBC-214ENST00000546271 CAMTA1Q9Y6Y1 1673 aa16.86■□□□□ 0.29
UBC-214ENST00000546271 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
UBC-214ENST00000546271 GCP02774 474 aa16.86■□□□□ 0.29
UBC-214ENST00000546271 CPDO75976 1380 aa16.86■□□□□ 0.29
UBC-214ENST00000546271 KTN1Q86UP2 1357 aaKnown RBP16.86■□□□□ 0.29
UBC-214ENST00000546271 RGPD5Q99666 1765 aa16.85■□□□□ 0.29
UBC-214ENST00000546271 SF3B2Q13435 895 aaKnown RBP16.85■□□□□ 0.29
UBC-214ENST00000546271 CCDC125Q86Z20 511 aa16.85■□□□□ 0.29
UBC-214ENST00000546271 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
UBC-214ENST00000546271 TTC21AQ8NDW8 1320 aa16.85■□□□□ 0.29
UBC-214ENST00000546271 CD163L1Q9NR16 1453 aa16.85■□□□□ 0.29
UBC-214ENST00000546271 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
UBC-214ENST00000546271 SLC12A5Q9H2X9 1139 aa16.84■□□□□ 0.29
UBC-214ENST00000546271 EVA1CP58658 441 aa16.83■□□□□ 0.28
UBC-214ENST00000546271 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
UBC-214ENST00000546271 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
UBC-214ENST00000546271 USP35Q9P2H5 1018 aa16.82■□□□□ 0.28
UBC-214ENST00000546271 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
UBC-214ENST00000546271 COL5A2P05997 1499 aaPredicted RBP16.81■□□□□ 0.28
UBC-214ENST00000546271 LTN1O94822 1766 aa16.81■□□□□ 0.28
UBC-214ENST00000546271 COL18A1P39060 1754 aa16.81■□□□□ 0.28
UBC-214ENST00000546271 TMF1P82094 1093 aa16.8■□□□□ 0.28
UBC-214ENST00000546271 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
UBC-214ENST00000546271 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
UBC-214ENST00000546271 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
UBC-214ENST00000546271 A0A1W2PP64 1363 aa16.79■□□□□ 0.28
UBC-214ENST00000546271 NINLQ9Y2I6 1382 aa16.79■□□□□ 0.28
UBC-214ENST00000546271 LRRC37A3O60309 1634 aa16.79■□□□□ 0.28
UBC-214ENST00000546271 DEFB132Q7Z7B7 95 aa16.79■□□□□ 0.28
UBC-214ENST00000546271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
UBC-214ENST00000546271 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
UBC-214ENST00000546271 SOX12O15370 315 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms