RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
SCARB1-209ENST00000545305 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
SCARB1-209ENST00000545305 FYB1O15117 783 aa18.6■□□□□ 0.57
SCARB1-209ENST00000545305 PPP2R1AP30153 589 aa18.6■□□□□ 0.57
SCARB1-209ENST00000545305 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
SCARB1-209ENST00000545305 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
SCARB1-209ENST00000545305 NME9Q86XW9 330 aa18.57■□□□□ 0.56
SCARB1-209ENST00000545305 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
SCARB1-209ENST00000545305 TNNT2P45379 298 aaPredicted RBP18.56■□□□□ 0.56
SCARB1-209ENST00000545305 COG3Q96JB2 828 aa18.56■□□□□ 0.56
SCARB1-209ENST00000545305 ORAI2Q96SN7 254 aa18.56■□□□□ 0.56
SCARB1-209ENST00000545305 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
SCARB1-209ENST00000545305 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
SCARB1-209ENST00000545305 PSME1Q06323 249 aa18.54■□□□□ 0.56
SCARB1-209ENST00000545305 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
SCARB1-209ENST00000545305 PIK3C2AO00443 1686 aa18.51■□□□□ 0.55
SCARB1-209ENST00000545305 OVOS2A0A0J9YW53 1432 aa18.51■□□□□ 0.55
SCARB1-209ENST00000545305 OVOS2Q6IE36 1432 aa18.51■□□□□ 0.55
SCARB1-209ENST00000545305 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-209ENST00000545305 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
SCARB1-209ENST00000545305 FOXO3O43524 673 aa18.5■□□□□ 0.55
SCARB1-209ENST00000545305 CFAP53Q96M91 514 aa18.5■□□□□ 0.55
SCARB1-209ENST00000545305 USP31Q70CQ4 1352 aa18.5■□□□□ 0.55
SCARB1-209ENST00000545305 SLAIN2Q9P270 581 aa18.49■□□□□ 0.55
SCARB1-209ENST00000545305 ZRANB1Q9UGI0 708 aa18.49■□□□□ 0.55
SCARB1-209ENST00000545305 USP54Q70EL1 1684 aa18.49■□□□□ 0.55
SCARB1-209ENST00000545305 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
SCARB1-209ENST00000545305 TRPM3Q9HCF6 1732 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-209ENST00000545305 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
SCARB1-209ENST00000545305 MTHFSP49914 203 aa18.47■□□□□ 0.55
SCARB1-209ENST00000545305 KRT28Q7Z3Y7 464 aa18.47■□□□□ 0.55
SCARB1-209ENST00000545305 ABTB2Q8N961 1025 aa18.47■□□□□ 0.55
SCARB1-209ENST00000545305 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
SCARB1-209ENST00000545305 NLRP6P59044 892 aa18.46■□□□□ 0.55
SCARB1-209ENST00000545305 WDR43Q15061 677 aaKnown RBP eCLIP18.46■□□□□ 0.558e-6■■□□□ 11.7
SCARB1-209ENST00000545305 BRINP3Q76B58 766 aa18.46■□□□□ 0.55
SCARB1-209ENST00000545305 XPCQ01831 940 aaPredicted RBP18.45■□□□□ 0.54
SCARB1-209ENST00000545305 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
SCARB1-209ENST00000545305 SBNO1A3KN83 1393 aa18.43■□□□□ 0.54
SCARB1-209ENST00000545305 MAP2P11137 1827 aaKnown RBP18.42■□□□□ 0.54
SCARB1-209ENST00000545305 PXDNQ92626 1479 aa18.42■□□□□ 0.54
SCARB1-209ENST00000545305 CDK12Q9NYV4 1490 aaPredicted RBP18.42■□□□□ 0.54
SCARB1-209ENST00000545305 MARF1Q9Y4F3 1742 aaKnown RBP18.42■□□□□ 0.54
SCARB1-209ENST00000545305 NUTM2GQ5VZR2 741 aa18.41■□□□□ 0.54
SCARB1-209ENST00000545305 LMOD2Q6P5Q4 547 aa18.41■□□□□ 0.54
SCARB1-209ENST00000545305 INSRP06213 1382 aa18.41■□□□□ 0.54
SCARB1-209ENST00000545305 ALS2Q96Q42 1657 aa18.41■□□□□ 0.54
SCARB1-209ENST00000545305 TNS3Q68CZ2 1445 aa18.4■□□□□ 0.54
SCARB1-209ENST00000545305 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
SCARB1-209ENST00000545305 NHSL1Q5SYE7 1610 aa18.39■□□□□ 0.53
SCARB1-209ENST00000545305 SHPRHQ149N8 1683 aa18.39■□□□□ 0.53
SCARB1-209ENST00000545305 PPM1GO15355 546 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-209ENST00000545305 SOX12O15370 315 aa18.39■□□□□ 0.53
SCARB1-209ENST00000545305 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-209ENST00000545305 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.538e-7■□□□□ 10.5
SCARB1-209ENST00000545305 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
SCARB1-209ENST00000545305 COL3A1P02461 1466 aaPredicted RBP18.39■□□□□ 0.53
SCARB1-209ENST00000545305 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
SCARB1-209ENST00000545305 NUDCQ9Y266 331 aa18.38■□□□□ 0.53
SCARB1-209ENST00000545305 EMILIN1Q9Y6C2 1016 aa18.38■□□□□ 0.53
SCARB1-209ENST00000545305 ARHGEF10O15013 1369 aa18.38■□□□□ 0.53
SCARB1-209ENST00000545305 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
SCARB1-209ENST00000545305 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
SCARB1-209ENST00000545305 PNPLA6Q8IY17 1366 aa18.37■□□□□ 0.53
SCARB1-209ENST00000545305 SLIT3O75094 1523 aa18.37■□□□□ 0.53
SCARB1-209ENST00000545305 ROBO1Q9Y6N7 1651 aa18.37■□□□□ 0.53
SCARB1-209ENST00000545305 FBLN1P23142 703 aa18.36■□□□□ 0.53
SCARB1-209ENST00000545305 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
SCARB1-209ENST00000545305 USP19O94966 1318 aa18.35■□□□□ 0.53
SCARB1-209ENST00000545305 SPATA31A3Q5VYP0 1347 aa18.35■□□□□ 0.53
SCARB1-209ENST00000545305 DIAPH1O60610 1272 aaKnown RBP18.35■□□□□ 0.53
SCARB1-209ENST00000545305 TOM1O60784 492 aa18.35■□□□□ 0.53
SCARB1-209ENST00000545305 NFAT5O94916 1531 aa18.34■□□□□ 0.53
SCARB1-209ENST00000545305 KIF24Q5T7B8 1368 aa18.34■□□□□ 0.53
SCARB1-209ENST00000545305 SOS2Q07890 1332 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-209ENST00000545305 MAP3K19Q56UN5 1328 aa18.34■□□□□ 0.53
SCARB1-209ENST00000545305 ADAMTS8Q9UP79 889 aa18.34■□□□□ 0.53
SCARB1-209ENST00000545305 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
SCARB1-209ENST00000545305 FLT4P35916 1363 aa18.33■□□□□ 0.53
SCARB1-209ENST00000545305 PEAK1Q9H792 1746 aa18.33■□□□□ 0.52
SCARB1-209ENST00000545305 AMPHP49418 695 aa18.33■□□□□ 0.52
SCARB1-209ENST00000545305 AHDC1Q5TGY3 1603 aaPredicted RBP18.33■□□□□ 0.52
SCARB1-209ENST00000545305 RTL1A6NKG5 1358 aa18.32■□□□□ 0.52
SCARB1-209ENST00000545305 PHRF1Q9P1Y6 1649 aaKnown RBP18.31■□□□□ 0.52
SCARB1-209ENST00000545305 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
SCARB1-209ENST00000545305 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-209ENST00000545305 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.523e-14■■□□□ 13.6
SCARB1-209ENST00000545305 LTN1O94822 1766 aa18.31■□□□□ 0.52
SCARB1-209ENST00000545305 PLEKHG5O94827 1062 aa18.29■□□□□ 0.52
SCARB1-209ENST00000545305 GCP02774 474 aa18.29■□□□□ 0.52
SCARB1-209ENST00000545305 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
SCARB1-209ENST00000545305 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
SCARB1-209ENST00000545305 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
SCARB1-209ENST00000545305 ZBTB7CA1YPR0 619 aa18.27■□□□□ 0.52
SCARB1-209ENST00000545305 IL13P35225 146 aa18.27■□□□□ 0.52
SCARB1-209ENST00000545305 CERKQ8TCT0 537 aa18.27■□□□□ 0.52
SCARB1-209ENST00000545305 PNNQ9H307 717 aaKnown RBP18.27■□□□□ 0.52
SCARB1-209ENST00000545305 HOXC9P31274 260 aa18.26■□□□□ 0.51
SCARB1-209ENST00000545305 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
SCARB1-209ENST00000545305 PHLPP1O60346 1717 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms