RNA–Protein interactions for RNA: ENST00000544481.1

UBC-212, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-212ENST00000544481 ARHGEF28Q8N1W1 1705 aaKnown RBP18.87■□□□□ 0.61
UBC-212ENST00000544481 COL14A1Q05707 1796 aaKnown RBP18.86■□□□□ 0.61
UBC-212ENST00000544481 GPRASP1Q5JY77 1395 aa18.86■□□□□ 0.61
UBC-212ENST00000544481 PAK3O75914 559 aaPredicted RBP18.86■□□□□ 0.61
UBC-212ENST00000544481 SF3B2Q13435 895 aaKnown RBP18.85■□□□□ 0.61
UBC-212ENST00000544481 NGDNQ8NEJ9 315 aaKnown RBP18.85■□□□□ 0.61
UBC-212ENST00000544481 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.6
UBC-212ENST00000544481 NUTM2GQ5VZR2 741 aa18.83■□□□□ 0.6
UBC-212ENST00000544481 ATP7BP35670 1465 aa18.83■□□□□ 0.6
UBC-212ENST00000544481 CHRNA2Q15822 529 aa18.82■□□□□ 0.6
UBC-212ENST00000544481 SPATA31A5Q5VU36 1347 aa18.81■□□□□ 0.6
UBC-212ENST00000544481 SPATA31A7Q8IWB4 1347 aa18.81■□□□□ 0.6
UBC-212ENST00000544481 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
UBC-212ENST00000544481 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
UBC-212ENST00000544481 PRDM11Q9NQV5 511 aa18.8■□□□□ 0.6
UBC-212ENST00000544481 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
UBC-212ENST00000544481 PHRF1Q9P1Y6 1649 aaKnown RBP18.79■□□□□ 0.6
UBC-212ENST00000544481 EN1Q05925 392 aaPredicted RBP18.79■□□□□ 0.6
UBC-212ENST00000544481 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
UBC-212ENST00000544481 THSD7AQ9UPZ6 1657 aa18.79■□□□□ 0.6
UBC-212ENST00000544481 ZC3H6P61129 1189 aaKnown RBP18.78■□□□□ 0.6
UBC-212ENST00000544481 CDK19Q9BWU1 502 aa18.78■□□□□ 0.6
UBC-212ENST00000544481 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
UBC-212ENST00000544481 BAG6P46379 1132 aa18.76■□□□□ 0.59
UBC-212ENST00000544481 TOPAZ1Q8N9V7 1692 aa18.76■□□□□ 0.59
UBC-212ENST00000544481 RGPD1P0DJD0 1748 aa18.75■□□□□ 0.59
UBC-212ENST00000544481 TNS1Q9HBL0 1735 aaKnown RBP18.75■□□□□ 0.59
UBC-212ENST00000544481 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
UBC-212ENST00000544481 ACEP12821 1306 aa18.74■□□□□ 0.59
UBC-212ENST00000544481 SPATA31A1Q5TZJ5 1347 aa18.74■□□□□ 0.59
UBC-212ENST00000544481 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
UBC-212ENST00000544481 LRP5O75197 1615 aa18.74■□□□□ 0.59
UBC-212ENST00000544481 HRCP23327 699 aa18.73■□□□□ 0.59
UBC-212ENST00000544481 NBPF8Q3BBV2 869 aa18.72■□□□□ 0.59
UBC-212ENST00000544481 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
UBC-212ENST00000544481 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
UBC-212ENST00000544481 STAC3Q96MF2 364 aa18.71■□□□□ 0.59
UBC-212ENST00000544481 NRKQ7Z2Y5 1582 aa18.71■□□□□ 0.59
UBC-212ENST00000544481 TRIM37O94972 964 aa18.7■□□□□ 0.58
UBC-212ENST00000544481 R3HDM1Q15032 1099 aaKnown RBP18.7■□□□□ 0.58
UBC-212ENST00000544481 CAMTA1Q9Y6Y1 1673 aa18.69■□□□□ 0.58
UBC-212ENST00000544481 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
UBC-212ENST00000544481 LARP1Q6PKG0 1096 aaKnown RBP18.68■□□□□ 0.58
UBC-212ENST00000544481 ABTB2Q8N961 1025 aa18.68■□□□□ 0.58
UBC-212ENST00000544481 KIAA1210Q9ULL0 1709 aa18.68■□□□□ 0.58
UBC-212ENST00000544481 SSH2Q76I76 1423 aa18.67■□□□□ 0.58
UBC-212ENST00000544481 PLEKHG3A1L390 1219 aa18.67■□□□□ 0.58
UBC-212ENST00000544481 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
UBC-212ENST00000544481 LMO7Q8WWI1 1683 aa18.66■□□□□ 0.58
UBC-212ENST00000544481 EVA1CP58658 441 aa18.66■□□□□ 0.58
UBC-212ENST00000544481 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
UBC-212ENST00000544481 CAMKK2Q96RR4 588 aa18.65■□□□□ 0.58
UBC-212ENST00000544481 PPIP5K1Q6PFW1 1433 aa18.65■□□□□ 0.58
UBC-212ENST00000544481 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.57
UBC-212ENST00000544481 USP19O94966 1318 aa18.64■□□□□ 0.57
UBC-212ENST00000544481 APBA3O96018 575 aa18.63■□□□□ 0.57
UBC-212ENST00000544481 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
UBC-212ENST00000544481 QRICH2Q9H0J4 1663 aa18.63■□□□□ 0.57
UBC-212ENST00000544481 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
UBC-212ENST00000544481 CPDO75976 1380 aa18.61■□□□□ 0.57
UBC-212ENST00000544481 CENPJQ9HC77 1338 aaPredicted RBP18.61■□□□□ 0.57
UBC-212ENST00000544481 GCP02774 474 aa18.61■□□□□ 0.57
UBC-212ENST00000544481 BARGINQ6ZT62 677 aa18.61■□□□□ 0.57
UBC-212ENST00000544481 TCP11L2Q8N4U5 519 aa18.6■□□□□ 0.57
UBC-212ENST00000544481 COL5A2P05997 1499 aaPredicted RBP18.59■□□□□ 0.57
UBC-212ENST00000544481 PDE3BQ13370 1112 aa18.59■□□□□ 0.57
UBC-212ENST00000544481 CABP1Q9NZU7 370 aa18.59■□□□□ 0.57
UBC-212ENST00000544481 NUP188Q5SRE5 1749 aa18.59■□□□□ 0.57
UBC-212ENST00000544481 RREB1Q92766 1687 aa18.58■□□□□ 0.57
UBC-212ENST00000544481 NLRP13Q86W25 1043 aa18.58■□□□□ 0.56
UBC-212ENST00000544481 USP6P35125 1406 aa18.56■□□□□ 0.56
UBC-212ENST00000544481 PARP4Q9UKK3 1724 aaKnown RBP18.55■□□□□ 0.56
UBC-212ENST00000544481 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
UBC-212ENST00000544481 NLRP6P59044 892 aa18.55■□□□□ 0.56
UBC-212ENST00000544481 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
UBC-212ENST00000544481 SIN3AQ96ST3 1273 aa18.55■□□□□ 0.56
UBC-212ENST00000544481 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
UBC-212ENST00000544481 SLIT3O75094 1523 aa18.54■□□□□ 0.56
UBC-212ENST00000544481 COL18A1P39060 1754 aa18.53■□□□□ 0.56
UBC-212ENST00000544481 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
UBC-212ENST00000544481 LRRC37A3O60309 1634 aa18.52■□□□□ 0.56
UBC-212ENST00000544481 PEAK1Q9H792 1746 aa18.52■□□□□ 0.56
UBC-212ENST00000544481 CRB1P82279 1406 aa18.52■□□□□ 0.56
UBC-212ENST00000544481 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
UBC-212ENST00000544481 SOX12O15370 315 aa18.51■□□□□ 0.55
UBC-212ENST00000544481 THRAP3Q9Y2W1 955 aaKnown RBP18.51■□□□□ 0.55
UBC-212ENST00000544481 TRPM1Q7Z4N2 1603 aa18.51■□□□□ 0.55
UBC-212ENST00000544481 PARD3Q8TEW0 1356 aa18.51■□□□□ 0.55
UBC-212ENST00000544481 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
UBC-212ENST00000544481 AATKQ6ZMQ8 1374 aa18.49■□□□□ 0.55
UBC-212ENST00000544481 TOM1L2Q6ZVM7 507 aa18.48■□□□□ 0.55
UBC-212ENST00000544481 WNK3Q9BYP7 1800 aa18.48■□□□□ 0.55
UBC-212ENST00000544481 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
UBC-212ENST00000544481 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
UBC-212ENST00000544481 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
UBC-212ENST00000544481 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
UBC-212ENST00000544481 OVOS2A0A0G2JMS6 1433 aa18.46■□□□□ 0.55
UBC-212ENST00000544481 OVOS2A0A0J9YW53 1432 aa18.46■□□□□ 0.55
UBC-212ENST00000544481 OVOS2Q6IE36 1432 aa18.46■□□□□ 0.55
UBC-212ENST00000544481 TTC21BQ7Z4L5 1316 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms