RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 NUTM2BA6NNL0 878 aaPredicted RBP26.82■■□□□ 1.88
DDX55-211ENST00000544429 NUTM2EB1AL46 878 aaPredicted RBP26.82■■□□□ 1.88
DDX55-211ENST00000544429 NUTM2AQ8IVF1 878 aaPredicted RBP26.82■■□□□ 1.88
DDX55-211ENST00000544429 ZNF692Q9BU19 519 aaPredicted RBP26.82■■□□□ 1.88
DDX55-211ENST00000544429 RGS17Q9UGC6 210 aaPredicted RBP26.82■■□□□ 1.88
DDX55-211ENST00000544429 SLC12A5Q9H2X9 1139 aa26.8■■□□□ 1.88
DDX55-211ENST00000544429 MYOM1P52179 1685 aa26.79■■□□□ 1.88
DDX55-211ENST00000544429 PIK3C2AO00443 1686 aa26.78■■□□□ 1.88
DDX55-211ENST00000544429 PHRF1Q9P1Y6 1649 aaKnown RBP26.77■■□□□ 1.88
DDX55-211ENST00000544429 PAK3O75914 559 aaPredicted RBP26.77■■□□□ 1.88
DDX55-211ENST00000544429 CDCA8Q53HL2 280 aa26.77■■□□□ 1.88
DDX55-211ENST00000544429 A0A1W2PP64 1363 aa26.75■■□□□ 1.87
DDX55-211ENST00000544429 KTN1Q86UP2 1357 aaKnown RBP26.75■■□□□ 1.87
DDX55-211ENST00000544429 LMOD2Q6P5Q4 547 aa26.75■■□□□ 1.87
DDX55-211ENST00000544429 CABLES1Q8TDN4 633 aa26.75■■□□□ 1.87
DDX55-211ENST00000544429 TMC1Q8TDI8 760 aa26.74■■□□□ 1.87
DDX55-211ENST00000544429 USP54Q70EL1 1684 aa26.73■■□□□ 1.87
DDX55-211ENST00000544429 USP19O94966 1318 aa26.73■■□□□ 1.87
DDX55-211ENST00000544429 TTC21BQ7Z4L5 1316 aa26.73■■□□□ 1.87
DDX55-211ENST00000544429 ADAMTS2O95450 1211 aa26.73■■□□□ 1.87
DDX55-211ENST00000544429 MEX3CQ5U5Q3 659 aaKnown RBP26.73■■□□□ 1.87
DDX55-211ENST00000544429 PHF23Q9BUL5 403 aaPredicted RBP26.72■■□□□ 1.87
DDX55-211ENST00000544429 TTC21AQ8NDW8 1320 aa26.71■■□□□ 1.87
DDX55-211ENST00000544429 ABTB2Q8N961 1025 aa26.71■■□□□ 1.87
DDX55-211ENST00000544429 TERF2IPQ9NYB0 399 aa26.71■■□□□ 1.87
DDX55-211ENST00000544429 EDC4Q6P2E9 1401 aaKnown RBP26.71■■□□□ 1.87
DDX55-211ENST00000544429 ANKRD36BQ8N2N9 1353 aa26.71■■□□□ 1.87
DDX55-211ENST00000544429 FNBP4Q8N3X1 1017 aaPredicted RBP26.7■■□□□ 1.86
DDX55-211ENST00000544429 SLIT3O75094 1523 aa26.7■■□□□ 1.86
DDX55-211ENST00000544429 HDGFL2Q7Z4V5 671 aaPredicted RBP26.69■■□□□ 1.86
DDX55-211ENST00000544429 C8orf37Q96NL8 207 aa26.68■■□□□ 1.86
DDX55-211ENST00000544429 AFF2P51816 1311 aa26.67■■□□□ 1.86
DDX55-211ENST00000544429 SLIT2O94813 1529 aa26.67■■□□□ 1.86
DDX55-211ENST00000544429 C11orf95C9JLR9 678 aaPredicted RBP26.67■■□□□ 1.86
DDX55-211ENST00000544429 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.66■■□□□ 1.86
DDX55-211ENST00000544429 NLRP13Q86W25 1043 aa26.66■■□□□ 1.86
DDX55-211ENST00000544429 PLCH1Q4KWH8 1693 aa26.66■■□□□ 1.86
DDX55-211ENST00000544429 NWD2Q9ULI1 1742 aa26.65■■□□□ 1.86
DDX55-211ENST00000544429 NUTM2GQ5VZR2 741 aa26.65■■□□□ 1.86
DDX55-211ENST00000544429 POTEAQ6S8J7 498 aa26.65■■□□□ 1.86
DDX55-211ENST00000544429 USP31Q70CQ4 1352 aa26.65■■□□□ 1.86
DDX55-211ENST00000544429 BCL9LQ86UU0 1499 aa26.65■■□□□ 1.86
DDX55-211ENST00000544429 ZNF772Q68DY9 489 aaPredicted RBP26.64■■□□□ 1.86
DDX55-211ENST00000544429 NGLY1Q96IV0 654 aa26.64■■□□□ 1.86
DDX55-211ENST00000544429 COL14A1Q05707 1796 aaKnown RBP26.63■■□□□ 1.85
DDX55-211ENST00000544429 NLRP6P59044 892 aa26.62■■□□□ 1.85
DDX55-211ENST00000544429 CPDO75976 1380 aa26.61■■□□□ 1.85
DDX55-211ENST00000544429 HAP1P54257 671 aaPredicted RBP26.61■■□□□ 1.85
DDX55-211ENST00000544429 NRAPQ86VF7 1730 aa26.6■■□□□ 1.85
DDX55-211ENST00000544429 FAM83GA6ND36 823 aa26.6■■□□□ 1.85
DDX55-211ENST00000544429 PLEKHG5O94827 1062 aa26.6■■□□□ 1.85
DDX55-211ENST00000544429 OVOS2A0A0J9YW53 1432 aa26.59■■□□□ 1.85
DDX55-211ENST00000544429 OVOS2Q6IE36 1432 aa26.59■■□□□ 1.85
DDX55-211ENST00000544429 GCP02774 474 aa26.59■■□□□ 1.85
DDX55-211ENST00000544429 ILDR2Q71H61 639 aa26.59■■□□□ 1.85
DDX55-211ENST00000544429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.58■■□□□ 1.85
DDX55-211ENST00000544429 NFAT5O94916 1531 aa26.58■■□□□ 1.85
DDX55-211ENST00000544429 KIAA0232Q92628 1395 aa26.58■■□□□ 1.84
DDX55-211ENST00000544429 LMO7Q8WWI1 1683 aa26.57■■□□□ 1.84
DDX55-211ENST00000544429 NME9Q86XW9 330 aa26.57■■□□□ 1.84
DDX55-211ENST00000544429 CARD14Q9BXL6 1004 aa26.57■■□□□ 1.84
DDX55-211ENST00000544429 USP21Q9UK80 565 aa26.57■■□□□ 1.84
DDX55-211ENST00000544429 ATRNO75882 1429 aa26.56■■□□□ 1.84
DDX55-211ENST00000544429 ZRANB1Q9UGI0 708 aa26.56■■□□□ 1.84
DDX55-211ENST00000544429 KIF7Q2M1P5 1343 aa26.56■■□□□ 1.84
DDX55-211ENST00000544429 COL18A1P39060 1754 aa26.54■■□□□ 1.84
DDX55-211ENST00000544429 KIF20BQ96Q89 1820 aa26.54■■□□□ 1.84
DDX55-211ENST00000544429 UNC5CLQ8IV45 518 aa26.53■■□□□ 1.84
DDX55-211ENST00000544429 ZC3H6P61129 1189 aaKnown RBP26.52■■□□□ 1.84
DDX55-211ENST00000544429 PRDM11Q9NQV5 511 aa26.52■■□□□ 1.84
DDX55-211ENST00000544429 KCNH5Q8NCM2 988 aa26.51■■□□□ 1.83
DDX55-211ENST00000544429 QTRT2Q9H974 415 aaKnown RBP26.51■■□□□ 1.83
DDX55-211ENST00000544429 NSD3Q9BZ95 1437 aa26.5■■□□□ 1.83
DDX55-211ENST00000544429 FYB1O15117 783 aa26.5■■□□□ 1.83
DDX55-211ENST00000544429 TRPC5Q9UL62 973 aaPredicted RBP26.5■■□□□ 1.83
DDX55-211ENST00000544429 CAMTA1Q9Y6Y1 1673 aa26.5■■□□□ 1.83
DDX55-211ENST00000544429 CDK12Q9NYV4 1490 aaPredicted RBP26.49■■□□□ 1.83
DDX55-211ENST00000544429 CCDC7Q96M83 1385 aa26.48■■□□□ 1.83
DDX55-211ENST00000544429 ARHGEF25Q86VW2 580 aa26.48■■□□□ 1.83
DDX55-211ENST00000544429 POLR3GLQ9BT43 218 aa26.48■■□□□ 1.83
DDX55-211ENST00000544429 BTG4Q9NY30 223 aa26.48■■□□□ 1.83
DDX55-211ENST00000544429 ABCC6O95255 1503 aa26.48■■□□□ 1.83
DDX55-211ENST00000544429 AATKQ6ZMQ8 1374 aa26.47■■□□□ 1.83
DDX55-211ENST00000544429 WASHC2AQ641Q2 1341 aa26.47■■□□□ 1.83
DDX55-211ENST00000544429 CHRNA2Q15822 529 aa26.47■■□□□ 1.83
DDX55-211ENST00000544429 GLI3P10071 1580 aa26.46■■□□□ 1.83
DDX55-211ENST00000544429 LTN1O94822 1766 aa26.46■■□□□ 1.83
DDX55-211ENST00000544429 RXRBP28702 533 aa26.45■■□□□ 1.82
DDX55-211ENST00000544429 ZEB1P37275 1124 aaPredicted RBP26.45■■□□□ 1.82
DDX55-211ENST00000544429 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.82
DDX55-211ENST00000544429 VPS72Q15906 364 aa26.45■■□□□ 1.82
DDX55-211ENST00000544429 PANK3Q9H999 370 aa26.45■■□□□ 1.82
DDX55-211ENST00000544429 RGPD5Q99666 1765 aa26.43■■□□□ 1.82
DDX55-211ENST00000544429 ANKRD26Q9UPS8 1709 aa26.42■■□□□ 1.82
DDX55-211ENST00000544429 COG3Q96JB2 828 aa26.42■■□□□ 1.82
DDX55-211ENST00000544429 GJD4Q96KN9 370 aaPredicted RBP26.42■■□□□ 1.82
DDX55-211ENST00000544429 COL5A2P05997 1499 aaPredicted RBP26.42■■□□□ 1.82
DDX55-211ENST00000544429 GGNBP2Q9H3C7 697 aa26.41■■□□□ 1.82
DDX55-211ENST00000544429 CGNL1Q0VF96 1302 aa26.39■■□□□ 1.82
DDX55-211ENST00000544429 SOX12O15370 315 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms