RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
LSM14A-203ENST00000544216 RIMBP3CA6NJZ7 1639 aa17.81■□□□□ 0.44
LSM14A-203ENST00000544216 RIMBP3BA6NNM3 1639 aa17.81■□□□□ 0.44
LSM14A-203ENST00000544216 RIMBP3Q9UFD9 1639 aa17.81■□□□□ 0.44
LSM14A-203ENST00000544216 ALKQ9UM73 1620 aa17.81■□□□□ 0.44
LSM14A-203ENST00000544216 NME9Q86XW9 330 aa17.81■□□□□ 0.44
LSM14A-203ENST00000544216 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
LSM14A-203ENST00000544216 PLEKHF1Q96S99 279 aa17.8■□□□□ 0.44
LSM14A-203ENST00000544216 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
LSM14A-203ENST00000544216 PCDHB15Q9Y5E8 787 aa17.8■□□□□ 0.44
LSM14A-203ENST00000544216 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
LSM14A-203ENST00000544216 C8orf34Q49A92 452 aa17.8■□□□□ 0.44
LSM14A-203ENST00000544216 ZKSCAN2Q63HK3 967 aa17.8■□□□□ 0.44
LSM14A-203ENST00000544216 EMILIN1Q9Y6C2 1016 aa17.8■□□□□ 0.44
LSM14A-203ENST00000544216 DDRGK1Q96HY6 314 aa17.79■□□□□ 0.44
LSM14A-203ENST00000544216 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
LSM14A-203ENST00000544216 POLKQ9UBT6 870 aa17.79■□□□□ 0.44
LSM14A-203ENST00000544216 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.78■□□□□ 0.44
LSM14A-203ENST00000544216 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
LSM14A-203ENST00000544216 A2ML1A8K2U0 1454 aa17.78■□□□□ 0.44
LSM14A-203ENST00000544216 DIP2BQ9P265 1576 aa17.78■□□□□ 0.44
LSM14A-203ENST00000544216 ITPRIPQ8IWB1 547 aa17.78■□□□□ 0.44
LSM14A-203ENST00000544216 DZIP1LQ8IYY4 767 aaKnown RBP17.78■□□□□ 0.44
LSM14A-203ENST00000544216 NUDT16Q96DE0 195 aaKnown RBP17.78■□□□□ 0.44
LSM14A-203ENST00000544216 THUMPD2Q9BTF0 503 aaKnown RBP17.78■□□□□ 0.44
LSM14A-203ENST00000544216 SOX12O15370 315 aa17.78■□□□□ 0.44
LSM14A-203ENST00000544216 DEKP35659 375 aaKnown RBP17.78■□□□□ 0.44
LSM14A-203ENST00000544216 SSH1Q8WYL5 1049 aa17.78■□□□□ 0.44
LSM14A-203ENST00000544216 PNNQ9H307 717 aaKnown RBP17.78■□□□□ 0.44
LSM14A-203ENST00000544216 IQSEC2Q5JU85 1478 aa17.77■□□□□ 0.44
LSM14A-203ENST00000544216 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
LSM14A-203ENST00000544216 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
LSM14A-203ENST00000544216 METP08581 1390 aa17.77■□□□□ 0.44
LSM14A-203ENST00000544216 RRS1Q15050 365 aaKnown RBP17.77■□□□□ 0.43
LSM14A-203ENST00000544216 ELL2O00472 640 aaPredicted RBP17.76■□□□□ 0.43
LSM14A-203ENST00000544216 CEBPAP49715 358 aaPredicted RBP17.76■□□□□ 0.43
LSM14A-203ENST00000544216 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
LSM14A-203ENST00000544216 CLTCQ00610 1675 aaKnown RBP17.75■□□□□ 0.43
LSM14A-203ENST00000544216 RWDD1Q9H446 243 aaPredicted RBP17.75■□□□□ 0.43
LSM14A-203ENST00000544216 FCHSD2O94868 740 aa17.74■□□□□ 0.43
LSM14A-203ENST00000544216 COG3Q96JB2 828 aa17.74■□□□□ 0.43
LSM14A-203ENST00000544216 PHACTR3Q96KR7 559 aa17.74■□□□□ 0.43
LSM14A-203ENST00000544216 NOB1Q9ULX3 412 aaKnown RBP17.74■□□□□ 0.43
LSM14A-203ENST00000544216 ARHGEF40Q8TER5 1519 aa17.74■□□□□ 0.43
LSM14A-203ENST00000544216 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
LSM14A-203ENST00000544216 USP32Q8NFA0 1604 aa17.74■□□□□ 0.43
LSM14A-203ENST00000544216 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
LSM14A-203ENST00000544216 SLC26A8Q96RN1 970 aa17.73■□□□□ 0.43
LSM14A-203ENST00000544216 PDZRN3Q9UPQ7 1066 aa17.73■□□□□ 0.43
LSM14A-203ENST00000544216 TRIM27P14373 513 aa17.73■□□□□ 0.43
LSM14A-203ENST00000544216 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
LSM14A-203ENST00000544216 BCL11AQ9H165 835 aa17.71■□□□□ 0.43
LSM14A-203ENST00000544216 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
LSM14A-203ENST00000544216 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
LSM14A-203ENST00000544216 TNRQ92752 1358 aa17.69■□□□□ 0.42
LSM14A-203ENST00000544216 SEC24BO95487 1268 aa17.69■□□□□ 0.42
LSM14A-203ENST00000544216 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
LSM14A-203ENST00000544216 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
LSM14A-203ENST00000544216 TMEM57Q8N5G2 664 aa17.68■□□□□ 0.42
LSM14A-203ENST00000544216 AGLP35573 1532 aa17.68■□□□□ 0.42
LSM14A-203ENST00000544216 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
LSM14A-203ENST00000544216 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
LSM14A-203ENST00000544216 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
LSM14A-203ENST00000544216 COL3A1P02461 1466 aaPredicted RBP17.66■□□□□ 0.42
LSM14A-203ENST00000544216 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
LSM14A-203ENST00000544216 DDX19BQ9UMR2 479 aa17.66■□□□□ 0.42
LSM14A-203ENST00000544216 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
LSM14A-203ENST00000544216 AAMPQ13685 434 aa17.65■□□□□ 0.42
LSM14A-203ENST00000544216 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
LSM14A-203ENST00000544216 LTKP29376 864 aa17.65■□□□□ 0.42
LSM14A-203ENST00000544216 IL16Q14005 1332 aa17.65■□□□□ 0.42
LSM14A-203ENST00000544216 IL13P35225 146 aa17.64■□□□□ 0.41
LSM14A-203ENST00000544216 TSPYL6Q8N831 410 aa17.64■□□□□ 0.41
LSM14A-203ENST00000544216 SPATA31D1Q6ZQQ2 1576 aa17.63■□□□□ 0.41
LSM14A-203ENST00000544216 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
LSM14A-203ENST00000544216 MED14O60244 1454 aa17.63■□□□□ 0.41
LSM14A-203ENST00000544216 UPF2Q9HAU5 1272 aaKnown RBP17.63■□□□□ 0.41
LSM14A-203ENST00000544216 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
LSM14A-203ENST00000544216 KIF16BQ96L93 1317 aa17.62■□□□□ 0.41
LSM14A-203ENST00000544216 EDC4Q6P2E9 1401 aaKnown RBP17.62■□□□□ 0.41
LSM14A-203ENST00000544216 ZNF692Q9BU19 519 aaPredicted RBP17.62■□□□□ 0.41
LSM14A-203ENST00000544216 TMEM2Q9UHN6 1383 aa17.61■□□□□ 0.41
LSM14A-203ENST00000544216 ATP7BP35670 1465 aa17.61■□□□□ 0.41
LSM14A-203ENST00000544216 SULT6B1Q6IMI4 303 aa17.61■□□□□ 0.41
LSM14A-203ENST00000544216 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
LSM14A-203ENST00000544216 ROBO2Q9HCK4 1378 aa17.61■□□□□ 0.41
LSM14A-203ENST00000544216 ACEP12821 1306 aa17.61■□□□□ 0.41
LSM14A-203ENST00000544216 GNAI1P63096 354 aa17.6■□□□□ 0.41
LSM14A-203ENST00000544216 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
LSM14A-203ENST00000544216 C1orf115Q9H7X2 142 aa17.6■□□□□ 0.41
LSM14A-203ENST00000544216 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
LSM14A-203ENST00000544216 ADGRB2O60241 1585 aa17.59■□□□□ 0.41
LSM14A-203ENST00000544216 DLC1Q96QB1 1528 aa17.58■□□□□ 0.41
LSM14A-203ENST00000544216 CPSF1Q10570 1443 aaKnown RBP17.58■□□□□ 0.41
LSM14A-203ENST00000544216 VAMP4O75379 141 aa17.58■□□□□ 0.4
LSM14A-203ENST00000544216 LRRC7Q96NW7 1537 aa17.58■□□□□ 0.4
LSM14A-203ENST00000544216 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
LSM14A-203ENST00000544216 NGDNQ8NEJ9 315 aaKnown RBP17.58■□□□□ 0.4
LSM14A-203ENST00000544216 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.4
LSM14A-203ENST00000544216 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms